XLOC_001651 (gene) - C. hemisphaerica

Overview
NameXLOC_001651
Unique NameXLOC_001651
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000024:817498..820888-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001651 ID=XLOC_001651|Name=XLOC_001651|organism=Clytia hemisphaerica|type=gene|length=3391bp|location=Sequence derived from alignment at sc0000024:817498..820888- (Clytia hemisphaerica)
AAATGGGTTGATTACGTTAAATCAAGATCTTGCTGCTGAAGATGTTTGGA
AGATCAACCAGTACAGTGTAATAACCGGTTTCGTTGATCCAGGATGGAAG
GACTTCAGAAAAAATGTAAGAAGTAAATTTATGTCTTGAAGCTAACCTTT
CCCTTGCCTGTACCAGACGACCACGGCTTTTTCCCATAGATTTATAAGCC
GAAAGGGCTAGATGTCGGGCTTTAAAAATCCGCGAAGCTTCTGATTGGTC
AAGCGCTGAAATTCTATTGTAATGTCACGTGACTTAGGTAGGATTTCCTA
ACTAACCACGACACACATTCCAGCAAATGCTTGACATCTAGCCCTTCGGG
CTTTATAAATCTATGCTTTTTCCTCGACACCGTTCCGTATGTTTCATTTA
TCCCCTAGAGATCCTTTGGGGAATAAAAATACTCGGCTTCAAGCCAATGG
ACCGTAGCAAAAACTCTACCAATAAAATTTGTCACCGCGAATACTATTTT
AACCTTTCAAGTGAAATAACCTGTTAGTGAGCTAAGGGACTGGGTTCGAG
CTTAGTTGTTTGTTACTATTTGTTTTTTTAAGGACGGATTAAATTTTCGT
GAGATCGATAATTTTGGTTCCACGTTTGACCTTTTGACTCTCCGAATGTT
GAACGAAGCAGTATCCAAATATCTTGGTGAAGATGAACCATTTCATGGGA
CAGGTGGTCTGGTCATTACTTTCAACAGTATAAACAAAATGGTATACCAA
GTGGCGATCGTCTCCAACTATACACAAACCTTTGTTGTGATGAATTTGCT
GGAGCTAGGTAAAGGACAAAAGTTTGTGCTTTACACGGAGCTGTCTCCAA
CTATACACAAAGCTAACCAACGGGAAACCGTTATCAGGGTGCAATTAGTC
CTGATTACCAATAAAATCCATTTCGACTGTGAAGTAGCCTATGCTAAAAA
AAGCTACGCTCTACGACAGAGACATCCAGAGATTTGCGTAAAAATATCTT
GCAGACACCGAATGATGCCTAACCGTAACAAACAAACTTTGCGCTATATT
TTCAGTCAGCGAAGAAGAGTTTGGTATATGCTAACTGTAGCTTATTTCTC
TACCTTTTACACTGATACTTTTACCTCAGGTCCGTACGGTTTCCACGGAG
TATCAAATCCGCATTGTCCTTACCCCATGGTGAATTTCATTTCTCAATAT
GCAGACGTAGTGGCTTTGAAAGATGGCTCAAATAATGGTGTCTCTGGACA
ATATGTGTATCCCCTGACAGACAGGTTGTGTATAGGTATGTCAAGTTCTC
ATATCTCAATTAGTACAAAGTGTCGCTTCAACATTAATCTTTATATTTCC
CGTTTGTGAAATTTAAACTAACGTTAGAATAATGTCATGTGTGTCCTTTG
GTCGCTCTTTTACTTTTTTTTCTGGACGTGGCATCATCATACATTCAATT
CATGGCGAATTTTTCTTTTTTTTAGATTGTGTATTAGTCAAAAATTAATC
TGTTGCATAACCAAAGCTTAAGGTCTTGTTTTGAATATTATCCCTCAGTA
TACCAGCAGATTATTTATCATAAAGCTTCAAGACATTTCATATATATTAT
ACAGAACTTTCATATATCATTATTGTTGTTATTATTAGCTTATTATAAAC
ACTATTTCATTAAGACCCATCTACGATCACAACAACAACAACAACAACAA
CAACAACCACGACCACGACCACGACCTTCAACACCTCTACTCATACTAAT
AAACCATCTTTAACTTCAACACTATCGCTTCACAACAATACTGTCCCACC
TCAAACAACAGAGGACAAAGAAGAAGATAATCACCATGGTAATGATTCAC
TCGCAACAACACAAACGCCATTGCTGTATTCAACATTATCACCAACCACA
TCGGGCACCACTTCAACCACGCCCTTCAAACGCCCTGGAAATGATGGTAA
TGGTGGTGAAAATCGAGTCAAAAGTAAACGAGGTGAGCACACCACGTTGT
TTCAACGTTTATTCAATGCAATATTCACAACGTCCATATAACGTTAAGTG
AAACGTTGAAATATCGTTGTGTTCAACTTGGGTGACAATACAATTGCTTT
GTTACTTCAATCTTATCAGCACACTTTTAGAAGTAGGATAGCAGACTTTG
TGGTCTTTACATTGTTCATAAAAGGTACACAATTTCCACATAACTTTAGA
TGGACGTTTATACAATGTAGCCAGATGGAAGATATGATATTTCTTTGTAC
AATAGATAGGCACTGTGTGTTCACAGAACTCCCTTTCAAGTATGTTTGAC
TGTTAAGTCAGCTAGTTGTTTTAGCTTCACTAAATTTACGAAGTGACGGT
GACACCAGACATTTTTAGAACCTGAATGGTCAATGAAATGGTCAATTTTC
ACTCGCTGCTCTAGAGCAGCGTTGAAAAAAAGTGGCATTAGGTTCCCTCT
TTTTTCTTTCCCGGCACCATTATCAGCTACTCAATGAAAATATATTTTTA
GTCCATCCAGTTTCATTTGAATAATGTTTTTCAATGCATTTTATTTTCGT
TGATTTCGATAGTGAAAAAAATGGTTTGTTCTTAAACCATTAACTTTCAC
TAGCATCGTGTTACTTTCTTCGGTCCTGTACTAATACAGGCGCAGTAGTG
TAGTGGCCATCGTTCTTGACATCCGTGCTGGAGGTCAGGGCATGATTCCT
ACTGGAAAATTTAGCAAATATTTCGTCTCTGGTGGAAACATACCCTTGAA
TTTCAGCCCAACTGAGAAATCAACTTTCATTTTATCCCCACTCGAAATCC
AATATTCGAAAATTGTGCTCCGAAACCATTCCCACTGGATTCTTTAACCT
TAATCCCTATAGGGATTTCAATAGGAATTTTTATCCCCATTTGAGGAAAA
AGTTCCACCGGGTCTGTGAGGTAGGGATGTGAGACTGGGCATACTTCAGG
ACAAAGTTTTTTACATTCTCTTTTCTTAACTTTCGATTTTAGAAAGTCAA
GTATCATCTGAAACAACGTCGATCATTGGTTGGTCTGTTGGAGCTTTTTC
TTTACTCATTTTCTGTATTATTGTGTACGTCGTTTTGAAAAGAAGACCAC
GTGATCAGTTCGAACAAGCCTGATTGGTCAATGGATTCCACGTGATCATT
TCGAACAAGCCTGATTGGTCAATGGATTCCACGTGATCAGTTCGAACAAG
CCTGATTGGTCAATGGATTCCACGTGATCAGTTCGAACAAGCTTGATTGG
TCAATGGATTCCACGTGATCAGTTCGAACAAGCTTGATTGGTCAATGGAT
TCTAAGATTCCACTACTACTTTTCTTGGATTTTTTCGCTTTTTACCCCAG
TATAGCCGGCCGGCCGGCCGGAGATTGGAAAGGGTCTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003018TCONS_00003018Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003018-proteinTCONS_00003018-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:817498..820888 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0.1	0	0.08	0	0.04	0.15	0.42	0.33	0.41	0.04	0.39	0.09	0	0.1	0.1	0.82	1.04	0	0.08	0.96	1.21	1.46	1.57	1.1	0.68	0.19	0.21	0.98	0.44