XLOC_001632 (gene) - C. hemisphaerica

Overview


Name	XLOC_001632
Unique Name	XLOC_001632
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000024:780894..790480+

gene from alignment at sc0000024:780894..790480+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_001632 ID=XLOC_001632|Name=XLOC_001632|organism=Clytia hemisphaerica|type=gene|length=9587bp|location=Sequence derived from alignment at sc0000024:780894..790480+ (Clytia hemisphaerica)
tctcaaacaaGATCAACCAAGAGCTTTCGTTCCATCATGTTTAAAACAGT
TTCAGATGATAGACTATGATGCTTCTTAGAATGATAttcttctcaatttt
atttctcattggACTGGTTGGTCACGTGAGTTAGTTTTAcctctttctct
tcttttagTTTAAAGGTTAAAGGTCttgtttttagataaaaatgatagca
gtttgcttactcgtcaattttaatttacaagctttttgatattggattga
cacggatgtggaacaagattggtcagaaagaggaaaagaaaaacattttc
ttgcttAGTCAGCATGATATACCAATAGGCAGACATAAGTGTCTGATatg
acacccctgtatcacagacccggtggaactTATTTTCCCACCGAGAagga
aatttttgtcaatctttccaGGGGGCTGGGCTCCCAGTGGGTCTATTAAG
AATTAAAACATTTAAGTTTTTAATTCTGGGAAAAATAGACCGATTATTTC
ACCTGATTAAAAGTATCTATTTATTTACTTCACATTGTATTTGTATATAA
AGCTTTCGGGTGGGGAGAAAGTGGACATGAAAACCCAAgtaaaaggtgta
aaaaatttaaagaaggCTCGCAAAAATATAACTTTGCAAATTCGATGAAA
GCCTTTCAGTTTCTTTGTCTATTGATGACGTTATAAATTGTACTGTACCG
GGACATCTTCGATTTTGAGACCAGTCAGCCGTCGGCTAAAAGAATGCACT
TATTTCATTACAGGCACATACTCTGAAAGAAGTCACCTTTTTATTTGGAG
GATATAGGCATGCAGTAAATGATGAAATTGAATGTGTTGCTCCTCCTTGT
AAAGTCTTCATCGACTTCTTTGCAAATCCGgtgagtacacgtttttttat
aagaacatcaaaaaattttgaaacctttggaagttcttaacttttttgag
tttcaagcctaaaaacattcttaacatgttcttattttcatcattttttt
agtatttttgtttAAGAAATTGAGTGTTCTAGGGTCTACAAATCCTCCCT
CgacatgttcttaacttgttattAACAATatggccatcgaaaccttatgt
tcttataaaaaaacaagtgaGTAATGGCCACTTTGCACGTCCAAGCAACG
GCCATTTAACACCTTTAACATTcatataatgttagatgaacgCTGGTGCC
TATAAGTATGTCTTCATTGGGGTGGGGCTTTATTCTGTTGATTCATGGAC
CTCATTGCCGAATTTCGTGTTAAAACGCTTCCATTTGCCATTGCCTAGTG
CTTGTTGTATTATGAATATCGACAATTCGATCAATAACAATTTTGAATAA
TGAAATAATGTCGTGGGGCACTTTTATGCTTCATTAAACAGCCCCTAGAT
TAAACATGGACAAGCATGCGTTTTTTTAAGACCAACTCTATAAGAGTAAT
ATGAGGCTCAGGTTTGCCAAAATCAACTAATTGCAATAGTTCAATAtatc
taaataaaaataaagtttcGATTTCTTTCAGGGGTATGGATATAGTACCA
CAAAGAATGTCCCTGTTGGAGAAGAAGAAACATTATCAAGCAGCCTCACT
TTCACCTTTGCAGATTAcgatgtaagaaacatttatgtaatttttgtgca
ttttacatggaagtaatttttttactttctttttacaTGTCTTTTTTTAT
AGGCAAGTGTTTTCCCATATATCCCTATATCAGGATCGCATTATgtttag
cattctattgttcttaaacaatagagctattgttcttaaacaatagagct
aTTATAGAAAAATAACATGTACTACCGTTGATACcacaatttatttttct
ttgaaatttaacCTGTGGAAACGGAATGTAAGCAAGAATTTAATCGCCTA
TAATGTCTCAATCGCATTACTTCTCAAGGAATCGAAGATAGAGAGCACAT
ATTCTAATTTCATATTCTAAGCTTAAAAGCAGattatataccttatcggc
tctttttacgccggccccttttaatgtgggcccttattacgccaccagcc
taaaaataacgccaataagggccggtgtaaaaagggccgataaggtagtt
gcATGTTTccagtttttttaattcttctGAGACTTATGAATACCAGTGAA
ATGATTTCCTTTTAAAAGAAATCTTATCTCCGTATTTGCAGGGCGTAGAG
CGTTTTATTGttaataacacccctgtgtcacagacccgcttggACCCCAA
CCCTGCTGgaaaatttggcgaaaatttcgtccccaCTTTTTTAACCTTGA
GACAATAGAACGTAATAGAATTGCTACAATCccggtcataatatttgaga
taaaagggaaattccctcgAAATCTCAAATCTAGCCACAAactcgggtga
gttagggcgtgtctagatttttaaatatcacaaatcccgaatccgcgacc
aatagcacccattctcagggattcacttatggatttttagatgacccata
ccttaaagtttcaggatccggtgttacgtaattaaatattaacctaaaaa
ttaattattaaagaaagtgtgaattgtgacgtcatcaaattatgacgtca
taaatcgtaaattagctctaactcattaagtacatgtcaaatctttgtca
aatttggaccaaagacgcatcttaatggtgccgaacttttcaatgaaaaa
ttttttgatgattttgatgacgtcagcaaaaaatgcaaaaaatcgaaaaa
tgcaattttttgctgacgtcatgaaattttcccaaaatttttttttcaaa
aagttacatttcagttacatgcatctttggttcaaatttgggatagattt
gacatgtattttttatattatagcgATTATACGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNTttatgacgtcaccaaattcgatcaaattatga
cgtcatgattacaatttctttaataattaatttttaggttaatatttaat
tacgtaacaaccgggccctgaaactttaaggtatagaggggcataccgga
taagtgggatgggggaacctgggaacctaaagtgggaacctaaatgaaca
cctgaaaagtaagatgggggaacctaagtgggaacctaaatgaacacctg
aaaagtgggatgggggaacctaagtgggaacctaaacgactaccggaaaa
gtgggatggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNgtatagaggtactttagagccctaagtggagctctgaa
tctggctgctattggtagcgaaaacttagggtaaactgttaggtttttga
gacttgccctaagtcactcgagAACGATTTGGAAGCGGTCAGGTTGAAAG
GGTtaaagttttaactctgagtttaaacatgagacttaagacttaggacc
ttaggatctgaggatccaaaagttcaagaatggtccaataagtCTCAGAC
TCTATTAAATTTAACAAACAGcccaaaaacgactttctctcccgaacttt
aaattgctaaaaagaaagaattaactaaaattctcaatatattttgaccg
ggATTGTATCTCTATTGGGATTTCAATGGGAATTTTAACGAGGAAAAAAT
CCGCCAAGGCTGTGAGATAGGTGTAATATGATATTAACCTGCTATTTATC
CTGGATAAACCTTGGATAGACCTGGATAGACCCTTTTAAATCTCAATGAC
CTTATGAAACCTTGGTGACCACTCTGTCGTCATATCTAAAATCTAGCTGT
ATAGcaaccgtagcatgaaggtagaccatccagctacggtgcgcaagttT
GTTACCCTGAGTTTCAGAGGTTGAGAACATCTCAACCTCTGAAtaccaat
agaaattttatcgcgcttgtgtcaatctaatcactatagaaaaaattaaa
gatgaagagcaaatattaccatattggTAATATTGgtatgtctagcagac
tgtatcagtatgcagtttactatttacgaatccccagaaacctccaagtg
taattgaaatgagtttctttcaaaagaaatcatttacatgatccccaaat
gtataacagtaattactaaacttttaatcatggaaatgtcactttattaa
tttcgcttagcgaaagtattacgatagcctttctgcggcggcggcgggGG
AGAATTTTTTTGGGGCGAAGATTATGGCGTTGGCGTTTGACNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttatttttcttataag
catatactttataagaatcaaatcaataactcttgatagaaggtgatata
cctttcggtaattagttcttacaaagtaaacaaagtggcgaacaatatga
gcatatttatttttcttataagcatatactctataagaatcaactcaata
actcttgatagacggtgatatacctttcggtaattagttcttacaaagca
AACAAGGGACAgcaaacaatatgagcatatttatttNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNctcgatgtaaagtagatttcagattagctttaatctctac
ttcttctttttcccatgcagttcaaattctaggcgaaattttcgacttca
agtcgtcttgtttgaatcgaaataatagacagactttatgttatgattct
ctatcactgactcttattaaaaagcattgatgacatatTTTAGTTgcgtt
ttcaacgacgggaatataaatatcaactttgaacctcatccaagatcttg
aatggtcgtcatggttacttttctctgtgtTGATTGCGTGCTGAATAGAA
TCtagattggtcggcacagcgtcgatatatgatttcgacctgtgcttttc
acggtacaaggttgtgggttcgatccccagccgggtcataccaaagattc
ccaaagtggtacttgatgcctctctgcttgatgctcagcaactaaagaga
cggatcaagggtaagtggagaaatccagggaaaggagaggcaccctcccc
taccttcgggtagacagctatacgaaaaggaaGCCCTACGGGTCACCCTC
CACTGCAGTCGCAAATTTACTTACTTAAACTTTAAAAATCTAGCAGTAAA
ACAAACAAATGTTTTCCATTTTGCAGCTTGAAGTAACCATCCAAGCCAAG
TTATATACACTAACAGCAAAAGAGtcaaaactttttctggttttgacaaa
aaaattcgtTTTGACGAAAGAAAATGCTGGTTTAGTCAAGTTGGACACTT
TGAGAGAGGAAGGTACACACAGAACAATTGAGCTGGAATACGTGTAAGAA
ATTTGTGAAGTAAGAGTATTGTATTTAGTGTTTAACGTTTGTACGTTAAA
AGAACGTTGAGTTTCAGCTAGGCCTTTAATAAAAATACCAATGGAGATTA
GAAACTTTGTTGTGTTCGCGTTGAAAATTCTGTAAAATGATTTAGGACAT
ATGACCGGGACCTAGATTTGCAGGTTCAAGATTATTTTGCCTTTAAGAAC
GCGAAAACTATAAAAAATTAATATCAAGAATCTCAAATCTACAATTTCAg
atcttaaagaaaaaagatcaaaacattcgTCCTTGTGTAACATAGGCTTT
ATTAACGTTACTGATAGACGCCAAAGATTATTTTCCTTTTGGGTTTAACT
TACAAAATAATTTGTTCTATCCCTACAGGGTTCTCTGTTCCAAAGGTTCT
TCTGGACCATTGCCAAATTGTTCACAGACAActccaacaacaacaataac
aaaacatCCCGCATCATCTACAACATCTAAACTATGTAAGTAACCTTTCC
CCTGCGGTCGTTTGAACCATGTTTGAACTACAGTggggagtctctataac
tcgaagaCGCACAGGGAGTTCGAATTTGTTCGTGTTAAGGAATTTTGAGT
TATTGAGTAAGGTTTGTTAGGCAtcgttaactgaagggacttATTCGAGT
TATAGTAGAGGTTCATGTTAAAGACACTCCGCTGTACAATCAAAGTCgta
atatttgataaaaacgcgtgaatttctttttttaaacatcacaaaattta
tttttagtatcatttcaaactaaaaataacGATGTACCGAATGCAAATGA
TATCATTATATCTCTCCTAAATGTTCGATCTTTGAGAAAACATGTTTTAG
ATATAAGGTCTGACAAGATACTCACAGAAAGTTGTTTGATATGTATGACA
GAAACTCAACTAGCGGACCAGTCCCACTGTAATGATATCGAAAATATACT
GGATTTGTTTTCCCTAAATTATAATAATGAAGCAAATCAACCTTATTCTA
ATACTAGGTGCtagaaacttttgaaatgtAGAGTTAACTCTGTGTTTCTa
gcatgagacttaagactagACAGGGTGTCAGAATCTAAAcactaaaattt
gttccaatGTGGCTGAGAGCCTAGAAGCCATCGAAACCctctaaaataga
aatattGAATGACAAAGAGTTGAAATGTTGAAATCGCAACTCTCGCTTTA
AACTCCGAAAAACAGAATTCTCAATGTGATTCGAAGTTGATTGTAACACA
CTACTTGTCATTAAGACAATTTTAATCATTAACTTATTTTTAATGCACTT
TATGTCACAACAAATCTTTGGTCAACAACTACCTTTTAATAAGCtgatta
tttttttgctttcttcAACCAATATCCTTCTTGAATTGAACCTAACTTTC
TagagtttaaaattttaaaatgccgGCTCTTACAAACAGTTTTACGTTGA
AATCTCATTATTTGTGTCTcttattagtgaggttaagtaaatcggtataa
ttacgacgacgaacgaaaatttaacaggctagtgactTTCAACctatcaa
atttcgtattttcactagcctattacatttttcgtccgtcgtcgtgatta
tcctggtatgcttaacctcagtattgTTGGATgtcaaaaacttaaaactt
gacttttgaaatattaAGGCAAAAGATTTGGAGGTTTTGTTCAGGACCAT
AGATTGAATTTACAACCCCAAAGAAAGACCTGAATATCCTCTGGTTATCT
CTTTCAGGTCCACCTGACGAATTCTGCAGCAATCAGAAGGATGGTTGGTA
CGGAAACCCTTCAGATCTGTCACAATTCTTTTCTTGTTCAAACGGGAAAG
CAACACCCTGTCAACAATGCCCTACAACACTGACTTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00002971	TCONS_00002971	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00002971-protein	TCONS_00002971-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000024	supercontig	sc0000024:780894..790480 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.44	6.83	8.23	5.82	1.09	0.86	3.89	4.78	6.98	6.11	10.37	7.44	14.6	16.13	13.76	12.02	1.92	3.32	20.04	22.62	0.78	1.24	2.78	2.32	0.58	0.9	0.46	0.79	2.39	1.37

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XLOC_001632 (gene) - C. hemisphaerica