XLOC_001568 (gene) - C. hemisphaerica

Overview
NameXLOC_001568
Unique NameXLOC_001568
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:736979..742525-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001568 ID=XLOC_001568|Name=XLOC_001568|organism=Clytia hemisphaerica|type=gene|length=5547bp|location=Sequence derived from alignment at sc0000023:736979..742525- (Clytia hemisphaerica)
TCTGTACTACTCAGAAATCTTTAAGACTGCTGCCAAATTTAATTTTTCTG TCTTATTTTTTAGTCGAGACTTTTATAAGATCCTTGGAGTTCGAAAAGAT GCAACAGACAGGGATATCAAGAAAGCATACAGAAAGCTTGCTATGAAATG GCATCCTGACAAAAATCCAGACGATCCAAAAGCTCAAGATAAATTTCAAG ATTTAGGCGCTGCCTATGAGGTAAATTTTAATGAACACATCATGAGACAA GTGTTGATAATGTGTTCACCAAGTCTATTATTTTAAGATGTTAGGTTTTA AAGCTTTAAAACTTGTAAAGTTGACTGAAAGTTTGAAAATATTTTTCTAC AATGAATGCAAATAATATTCTCTGACAGTCCAGGATAACTTTCAATGATT GCATTAATGTCTGATATCACTCCTAATAAGATACTTTATTATAAACACTC ATGATCACTGGAGAAAATATAATAAAAGTGTCCAGTTAAAGCTTGTCCAC TATAATCTGGGTACATACATATTTTAGGGATTTTTTGCTACCAGAAAACA GAATAATTTCTTCAAGAAAAAGAATTAGCCGTGGAAAAAGGTTTAAAAAG TAAAGAAAGTCTATTAAGTATTCAATATTCTAGCACTAGTCTAAAGCAAA ACTTAAACCCTCACTTCCACCACGACTCTGCCCTGGACCAGCTTTTACTC ATCATTACCTAGATGATCATAGAAGCAAGAACTAGACTTACGATTGACCT GAGTTTTACTTTATAATTCTAAAATCACTTATCTTAGGTACTCTCAGACG CAGACAAAAGAAAAACATATGATAAGCATGGAGAAGAAGGCGTCCAGAAA ATGGGCGGCGGAGGTGGTGATGGATTTGACCCCTTTGAATCGTATGTCTT ATTTCTTTTTCAGATGTTTTTTGTTTTGTTTTTGACATTACTTTAATTAG TACTTTCAAGGGATAATCACTATTTAAGATTTTTTTGGCCTGGAGACACT TTCTGTTCTTTGTCACTGCATTTTGTCAGTTTTTAGATTACTTCAAAATA ATGTTCTTTAAAGGGATGATCAGAATTTAAGATTTGGAGCAATACTGGCA ATATCTTTATTTTCATTTTATTTTTACCTTTTCAAAAATAAATAGACATC TGATTTTCAAAAGGTACCTGTCAGCCAAAATTTTCAAGCTATATTGTTTC GGTGAGAGGTAGTTTATGCACTTGGTATGTTTATGATCTAAGGTATAAAG TTGAAAGTTATTTAAAACATTTCCTCCCTTGATTGGCTATAATTTTTCTT TAAATCAGATTTTTTGGTGGATTCGGAGGATTCGGTTTTGGCGGTGGAAA TAAACAAAGAGGCCATGGTGAAATTCCCAAAGGTGGAAATATTGTTATGG ATCTTGAAGTCACATTAGAAGAATTATATACTGGAGATTTTGTCGAGGTA AATTATCTACAGTTCTATTAATCCAATTAGCTTTAAAAAGTTTTTTCAAC AGCCAGACTTTTCCACTAATTTAATGCTGAATTTTAGTCGTAACTGGTCG TAATAATATTTTAAGACTATTGATATTCTAGGAAGAACCAGAATTGACAC ATTTGTGATTGTTTCGTCTTAAAAAACTAGTTCCATTCAAATCTCAAAGC TCTTTGCTTTTCTTTTATATAGTAGTGACCAACTACAACCTTTCACTTTT CTCCTTTTTCGCAGGTTTTAAGGGCAAAACCATTCGCTGAAACAACGAGC GGTACTCGACGTTGCAACTGTCGAATGGAGATGAGGACACATCAATTAGG ACCTGGACGTTTCCAAATGATGCAAGAAGAAGTTTGTGATGAATGCCCCA ATAAACGATTCATTATCAAAGACCAATTGTTAGAGATTGAAATCGAACAA GGAATGCAAGACGGTCAAGAATATCCTTTCGTGTCTGAAGGTGAGTTGTA CCAACATTTTTTGGACCTACCCCGATGGTGGGGTGGAGGTCCTATAAATT AATCTTTATCCGTTTGTTCGTTCGTTCGCTCGCTCGCTCGCTCGTTATTA GCTAACCTCATGATTGGCTCATTAGTTTTTTCTGATTTTTTTTCTCAAAA AACGCATGTTTATCCATAAGAATCACTATTAGTAATTTTGCTCACAAAGT CTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCACTTGTTGTATTCTAACTTCAACTTTTTCTGGGGACCT TTGTACGTAGAGGGGGTAAGCAATATTGAAACACTGGGAGGATGGAAATG TAGGGGGTCTAATAAAATGGTGGCTTCGACACAGAGCAAGTTTCCTTCGA AACAGATTTTCTTTGAAAGAGGGGCGGGTAAAGTTTCATTACAGATAGAG CTTTCATACCCCTCTGCAATCTATGCCACAGTCAACTTTGATTATCGATG GTTTCTAATGGCAATGTGAGTCAGGCTATCAATATATTAGAAAAAGGTTG CTTAACTCACATTGAGTTATAGTTGGGTTCTATGAATTTGAGCGCTGTGA ATCTATGCTATGTTTTTTTCTATTATTCCAGGAGAACCACATATTGATGG AGAGCCAGGAGATTTGATTTTTAAAATTAAAGAACTAAAGTAAGTAAAGA TTCATGAAAAACCAAACATTTTTACCAAAAATTTTGTGCCTAATAAAGAG GGATTTGGTTTTAACGGCTGAAACTCCTCATTTCAGAGGGTCCCAAGTGA GTGTTTTGATAGCTAAAAATATTTGAAAAAGTTCATAAAAGTTAGTTTAG TACTTTAACTCTCATAAGTTTGTTCAATTCATAGACATAAAACATTCGAA GGAAGGAAGGTTCGAAATCAGTTTAGTACTAAACTCTCATAAATTTGCTC AATTTCTAGACATAAAACGTTCGAAATCAGTTTAGTACTAAACTCTCATA AATTTGTTCAATTTCTAGACATAAAACGTTCGAAATCAGTTTAGTACTAA AATCTCATAAATTTGTTCAATTTCTAGGCATAAAACGTTCGAAAGAAGGG GAGATGATTTGTTCACTAACATCACTATCAGTTTAGTTGACGCCTTGAAC GGTTTCGATATGGAATTCAAACATCTAGATGGTCACGTGGTCAAAGTTCA CCGCGAAAAGATCACATGGCCTGGTGCCAAAATCAAGAAGAAGGGAGAAG GGATGCCCAATTATCATAATAATTTGGACAAGGGTGTCTTAGTGATCACT TTCGATGTTGATTTCCCAAAAGGAGAATTGGCAGAGGAACAAAAAGAAGG TGAGAAATCTGGTATAATCTCTGATAATTATGATTCTAGGGTTTTAATCA ATAAGGTATATAAAGATCTCCTATGAATCCCCTATGTAAAGCGCTTGATT GGAAGTAACACTTGCAGCTAGAATTCGAAAAATGTGAAACACAAAACAAA GAAAGTGCTAGATTCAATCCGTTATCCAAAATGCGGCGCAAATTTTTTCT TTGCCTAGAAAAGGCTGAAGATACCTGGTAGGTGTGAAGTTGTTTGAAGA GGCGTTGTAATCCTTTTGGCAACCTTTGCCCTAAAAAAGGAAAGGCTGAA GATATTTCTCTAGCCTTCAACTTGACAACTTGAAGCTCGGTTTCTGATTA ATTTCAGAAATAATTATCGCTCTTTTGATAGTTTCCCTTCGTTGGTTTTC TTCCTCAAAATTCTATAATAAAGGTTGTGGTTGTAAGTTTTAAAGCTCTA GAAAATTGAGCTTTTTCTGTATCTGGCTGATTTCGATTTGATTTGATTTC TTTTTTTTTTTTAATTTCAGCAATAAAAACGATATTGAATCAAGATTCGA AACAAAAGATATACAATGGATTACAAGTATGATAGATAGGAAGCAATTGA CATTTATTATTTCATAGGTAGGATTTAAAAAGGGCTTTATATTTTATCGT CAGAAACTTTGAGGCAAAGCCAAAATGGCACTTTGATGTAAACTTATCCT TGGCGGAATTTATTTTTGCGATGATTAGACATTTCTATTGGATCGCCATC GAGTCTCGATTTTCAGCGAATTTTGTCTTAAAAATACACAAAACGTATTT TCCGTTTGATAACAGTTTCCACGCCTATAGCATAAGTGTGTGTGTTCTCA GACCTGGAGTGGCCCAAAATTAAAATCCCATTTCTAGCTCAAATGGCTAT GATATGTTGGGAAAAATTTCTATTTTATGTTTTTCGTCAAATTTTTTCAT GAATGTATTTTTTTGTTCGTTCGATTTTTAGATTTATATTGATGTATACA TATTTAACTTTTTTTCGAATTTCTAGGCCTTTTACAAAGTTCAAACGTTT TATAGAAATTAATTTTGGAAAATTCAGAATTTCATTGCGTTGTTACAAAC TTCGAAAAACAGCTTTTAAACCTTAATTTTCATTTTTGATACAGGTGAGA AATGTTTTTGAGAAAATTAAGATTCTTTATAATGTTTATTCCAGTTTTAT TTGTTGTTTTTCTTGTAAACTTTATTGAATAAGAGCAAAGTTTTTTGAAA ATGAATTTATTTAAGAAAGGTTACGATACAAGAAAATGCTTGTTGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002889TCONS_00002889Clytia hemisphaericatranscript
TCONS_00002888TCONS_00002888Clytia hemisphaericatranscript
TCONS_00002887TCONS_00002887Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002888-proteinTCONS_00002888-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:736979..742525 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DNAJB11dnaJ homolog subfamily B member 11 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
97.24 101.7 18.86 9.21 79.86 59.3 102.03 102.97 83.66 96.17 68.2 58.84 66.5 55.8 60.12 70.72 95.25 88.38 22.02 37.19 57.61 58.15 99.72 98.43 68.11 71.3 72.2 51.78 92.25 74.74