XLOC_001529 (gene) - C. hemisphaerica

Overview
NameXLOC_001529
Unique NameXLOC_001529
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:395866..401398+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001529 ID=XLOC_001529|Name=XLOC_001529|organism=Clytia hemisphaerica|type=gene|length=5533bp|location=Sequence derived from alignment at sc0000023:395866..401398+ (Clytia hemisphaerica)
GTTTTTCTTCCAATCCTATATTATTTCAGTTAATATTCTActttaaagtt tcatttttatacAGTAGTAAAACAAAAAGCATAATGTACAAAGCACTTGT TGTCATCTCTGCATTACTAATTTGCTTGAACGCAGATAAAATTACAATCG ATCGACAAAAAACGACTAAAGTCGGTAGCACTCGTTTTTGGCGAGTGAAT GATCTGTTTGAAAACCCATGGTCGGATGAACGATTTTGTGTACAATTGAA CGGggaatgttttgatcaagaATGCCATCAGTGTCAATGTAACGAGAGGC CAGGAGAATCTAAAATGTTCATCTCATATAAATATGGATGCATGGATAAT GCTAAAGCTATGACAACGTTAAGTCCAGGTATCATTACACAGATATCTAT ATGAAACACTAGATGGAGCTTGTACGTCCCCGCCGAAgcaaattctttaa aaagtaGACCATCAGTGTCAATTTATAATTTCCTTGTTTCTCACCATGCT TGTTGATCGTTTTGATTGAGCTATTTGCCGGCGCCGAACTTTGGTCTACT GTGGTGAAATTTGCCGGTGTATTTTAAAGCCCTATTTGAAAAATACTGAT AATCGAAAACCGGCATCCACTAACGAATACGTGCTACTTAATCAAAACCT TGTAGTAGTCTGTTATTCAGGTCAAATATGTAAGGTCACGAGGAACGATG ACCACCGAGTGATACAAAATGCAAGCATAGCAATATAGAGGTTCCTGGTT TAAACCTCCGTTCCTTTCAATGTTCCGATTAGTTCATAGATATGCGAGCC GGCTGACTGTGGACCTCGTGAAAACCACCAATACATTGTCCAAAAGTTCT TGACTATATCCAATCAAAACTTTCCTTCTTTTAGGTAAACCATGCTGGCC TCCTAACACAAACACAGTAGGTGACGTAATTCTACATCCAGGATTCAGCC CTAAAACAGAGAAATGTGTATATTTCACACACGTCGATCAATATGTAAAC CCATACAGTAATTGCCAGTTCGATAAAGTCTTACTGTACGATCAAGGATC GTCCACTTTTGTTGAAGATAACGCTTTTGAGCAGCGATACGATTTAGAAT TTGGACATTTACAACATACAGCCAATGGGATATTTGAATATTGTGTGAAG GTAAGCCAAAAGTATACCCATATCGCGTCTGtcaaatatatttcaaagaC CCAATATCGGTACATATTGTCTGCTTTTGTTGAAGATAATGCTTTTGAGC AGTCATATGATTTAGGACAACGAACTGATTAACGGAGAGAAAAAAGAACG ACGAATGAAAAAAATACTGTGAGCCTAGAGTGATAATAATTGAGTTGTTA ACTGATTAATTGGGGACAAAAATATCACCGAATGGCAAAAAATAAAACCA TTATATTTCGTCCATTTTCTGACTCCATATTTCAGTGCACATCAGGCAAC AAATGTGACTTTGGATCATGGAATGGTCAAATTGTTAAAGTCTTGTTTAC ATGTCAGAATTTGAACAACGACGACGATCACTGTTTACTTTTTCACAGAA GTGGAAGACTCGATGTTGACAGTAAGACAAATTGTAGCCTTTTATTTTCG GGGGAATCCATGAATGGAATATCTCTGATGTTTTACCCATCTTTACCTAC CGTGAGAATCAGAGTGTATGAATCTTACACTGTGAGGACAAACATCGATT CTAATCAGCGTGCATACAGCAAGAACAAAAGTAACCAAGGCAATTACCCA TGATCTTGAATAAAGGCCGAGCCAATCAATGTTACACACTTTAGAATCGG ATAAACTCGGGAATGTTAAAAAAGGATCTCTTTCGAAAAGGAAACTCGTG AAAATTGCTGAAACTAGATATAGGTAATTGTATAGTCTATTTCCTTAAGC TTAAATGATGCTATGGGCTCTCCATCTTCGTTTCTTTGAATAGTAATGCG ATTGAGACCTGTGCGTTAGAATTCTTACAGTCCGTGTGTCACAAGTtaaa tttcagagaaagctaaattgaaaaattaagtgTATTTTTATGCTACAGTA CTTGTTAAGAAGCATTCCTTAAACATTATTTACGAAACCTTCGTTTAGAA TCAGTAGCACCCACTCTTCCACCCACGCTACCACCGGTAACCAAGGAAAC ATCCACCACCACAACGAAAGCACCAATCAAACCGACACATGAAGCAACGA CATCACCAActacaactaactcaacaatgGATGGAAAGAACAGCGGGATA ACGAAGGTGGGTACAAATCCACAAACAAAATAAACTTGACATGTCGGGTG AAAAGTTGGATTCTTTCAATACTTCGCGGtgaaaaaccgaaaattttcgA TACGTGACCACCTAATAAAGCTATTTCAATATAGAATTTTATTCACTGGA GAAATGTGTGGAGAGGTCGTGGAAAGGAAAAGAAATGGAGAATTGAAATT TTCGATTGTTCATGTGTTTTTCCTTTTAGGAGACATCATCTGAGGATTCC TCAACGACGACCATCATCATAATCGTCATCGTGGTTTTACTTTTAGTGGT GGTCATCGTTATCATTGTATTCGTTGTACGAAGGAGAAGACAAAGGTAAA GAAACCTCTGACGACTTCCCATACCCAAACAAGCATTCCCGCGATCTGTT TTATCTGGATGTTTTATTTGCAGTGGTCACAATATTTGTGGGTGTCACCc aatttctaaaaagaaaatttgtttgcGCATAATTCCAATCTTGGAAGTCC CAAAAACCTTTCCCTTTCCTTATTGCATGGTCTAGTGGGGGAATTGGAAT TAGGTCTCTTGATTTTACAAATCTAAAGGCCGCTatccactcagcatttt atgttCGGTGAACAAGGCGCACGGCTCGGGCGCTTTGGTCGCTGAACGCT TTTCTCATTCCACTGATCCAAAATAAAGGGGAGATGTGCTGcacattttt cttttctcttttgtttGGAAATTCTTTTCCACACGGTACAAAAAACTTAA ATGTTTCCTCTGATTGGCTATTTTAAAATTAACAATAGGGAAGCTGCACa gcctagcgaaaaaagttgaaaagtttcaactcttgATGCGCTCAAAGCGA TAGCCTTTGAAGgcttgatttatgtaatttatgcaataattaaaCCGCGC GCCTTGTTCgtcgaccataaaatgctgagtgggtagcggcctttATTAAA GCGGGGTCCAGGAGGTCAAAAAGGCCCCTTCGTCCGCGGAACAGGTGACT GTTCGTCACCATGCCAAATAGCAAGCAAGCACGAGAAAAGAATCAAATCA CGTGCGCAAAGTTACATTCAACTTTCATTTCTTTCGTCTAATACGCAGGA AACAGTTACATGGGCACTTGGTGAACGCGGATTCCAGGGATTTACAAATG GAAGACGTTGCATCACCTTCAAGGAGGTCagaaaaacgtgaaaatgaTTA TACATCAGTTGCTACCAATTATGCGTCACCTAAAGATTTGGTAAATAACC TTCACCACTATAAACTTATAACAGTTACTTATACAATTACTATTATACAG TTACCTAATTCGTAAattcttttctcaaaaatttaaaaaattggcgATTT ATTTGTGATTATATAGTTCCTCTCAGATTAAGAAACACTTCAAAAGACGG ATAGTCTTCAAAAAGTGGAAAAAGACGAACGTTTTGAGAGTGAACAGTTT AAAAACAGGTAAACGAGACAGCCATTTTTCTTCTAAACTTATATTTCTCC TATCCTCGTCTTAAAGGGTCAATCTTCAGAAAATCTTTATTACCAACCAT CAAATGAAGATCCAAAAGtgtctttcaaaaataaacaagcaCCCTCACGA CAAAGGAGTCAAAATCATTATGAGCCTACTACCGTAGATCTGACAAAACC AACTGATATTAGCGAAGAGGCAGAATATGAAGACCCGAATGCAGGCCATC TGTATCAAGCCATACCAGCTAATGCTACTTTTGAGAGAGAAGGTGGTTAT ACTAAGGTAACAATAATTACAGTTATGTGTTGTAACGTAAATAAGAAACG GTTTTAGGAAGAAATGGCCGAGTGATAAGGGGGTTAACGCCTCAAACCAG GGATTCCTGCTTCAAATCTCCGTCCCTTCCAATGTTCATATATAACTGAG CTCTGGCTGGCCGTCGACCtagtgaaaacaatcgaaaagtTCGAGATTAC TATGCTATCCACGTAAAGTATCGAATCTAAAATTGTTTACCATCTCTACA ACAGACGAAAAAGCTACCTCTATTAGGAGTCAGATGCTACATGGCCTCTT TTTCCTTATGACGAATGACGGCTTTTTCTTACAATTGATTAATTAGAGAA AATATACAAGTCGTGTTGCTTATACAATCGGTTTTAATTTATTGAGCAAG AAGATAATGCTAATTCCCTTTCGGTCCCTCCCGTCTACAAATTTTCTTCC TACTTTTACCTGACACATTAaccgctcacttttcccgcctGTCATCGTTC CCGCCCGACAGTGCCAGTCTAgtgacttttcaactttttcatgatgctaa agattccttttttacaaaagaagaaATCGTGAAATCACATGTTTTAAGGT TTAACTATTCATTGCATCTCTTTCAACAAGATATTTAACCTGTCTTTAGA TCGTTAAAAAGGAGCCGTGGGAAAATTCGCAGCCAGCACCTGGACGAATG AAAGGGCGACCAGCAGCTAGACCCCCGTTAGGATACGATCAAGTTGGAGG TGTTGATAATGATGGTGAAAAATACGAAGAGGTTGGAAATGTGTTGAGGT GAATAGCCTTTTGGTCTGTTAAGGTTTTTAGTTCCAGAATAAACATCACG ATCAAGTTGATTAAAGATGTGGAGTGATGTGTAGTGTTGCGATAAACAAA CAGCTCGTGGTATGAGATACCTTGTTTcagataaaatcaataaaacatCA CGATACAATTAAATCAAAGTGAATGGTGTTTGCTAAATTATTGTCTACTG TCTATGACAAGTACAACAACAATGGAAAAACGTCATGGTTTGTGCAGGGT TCAATTTACCTCGCGCGGATACTTCTGAAACCATTATTGAGCGGCCGATG ACCACTAATACGAGTGAAATTTCCAAACTTCATATCATACCTTAATTAGC TGGGGCTTTGTTACTGATGAACCACAGCCGTTTGTCGATACATGTTTTAG GGGAGACAAgaaagacaaaattttggtacAAGGAGAGTCATTGACACGCA ACTGATTATCTTTGTAGACATTTATTATTGCTACTGTTTTAAAGTCTATT TGCTTTAATCGCCTATTCTTGCTCGCTTCTACAATCAAGGtaataatatt tgagaaaaaaaggaaatccccacgaaattttacaccacaaacgatttaga agcgctctaaattaggttacttttaacgctagacttaagacttacgaacc taggatctgaggatccaaaagtccaagaatggtccaatagggctctgaat atagcctggaagtctaaaaacccctcccgaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002804TCONS_00002804Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002804-proteinTCONS_00002804-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:395866..401398 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.26 0.48 0.32 0.05 0.09 4.04 4.75 5.18 10.19 4.1 4.68 5.44 6.2 6.71 8.68 6.62 9.21 6.41 7.53 5.18 4.95 5.45 5.64 13.98 11.77 21.29 16.97 16.42 22.6