XLOC_001528 (gene) - C. hemisphaerica

Overview
NameXLOC_001528
Unique NameXLOC_001528
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:382500..391709+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001528 ID=XLOC_001528|Name=XLOC_001528|organism=Clytia hemisphaerica|type=gene|length=9210bp|location=Sequence derived from alignment at sc0000023:382500..391709+ (Clytia hemisphaerica)
tttttatttaacaacTAAATGTTAGTTTAGAGTATGTTCAAACTTAGACA AGTCGTCATTTTCGCGTTCCTATCAATGATATGGAGACCAATGATGGGTA CACTGAGAATCCGTAGAGAACAGCTAGATCGATTTTGTCTCTACATGGAA GAATTTTGTGAAACCAAAGACTATTTCGAAAACCCGTTGAAAGCGGAATT ATTTTGCTCAATTCGTAACGCTCGTTGTTCAGGCACAGATTGCAAGGAGT GTACGTGTCAAGTTGGCTTCGAAAATTTCATCTCCTATACTTATGGATGC ATGAGTTTTGAAGCGTCAAAGAAGCTTTTGACTGGAGGTTAGTAAATGTA AACACACCAACACTTGTCTTCAGTAGCGCGCTCCATCAACCTGGGTAGAT TCTTCTGTGAAGCTTGCGTTGACGCCCCTTTGTAAGAAGTTTTTTCTCGT TTATCTAAAGACTGCACTATGGATGTTGCTTCTGAATCCCAAAGAAGCCG ATAAAGGGTTCTCATTCTATGCTCGTCACAACCTTCAAATTCTTTGGACA TGCAATATTGTGAAATCTtctaacgaaaaaaaaaatgaaagagagaaCTA TCGCATAATAACTCCTTACTTTTTTCAGATACAAATGTCTTTCCACCATC TATGGAGCCTTGGTATTCAGGGGCTATAGAGTCTACAGGCGTCATCCCGT ACCTTAACATGATGCTTGATCCATCGTTTGCATATAAGTACATACGTGGT GTTTGCAATGTAGATCAAATGGAGTTGATTGATGAGGGGACATCCCAGCT GGTGATGAAACCGAACCGAAACCGTATGATGATAGTCAGTAAAAATCCCG GTACTGATGGAAAATATTACTACCGAGTCAAGGtaagattttaaactttt acagGGCAACTAATGGTGCAATTGCGAGTATACTTCTATATGGATTGGGA AGTGAAGATTTGAATTCTGCCCCGGTGAGGGGgacaactgacggtatgtg cgtcTAAGCAATGTAAACAGACCAAAACCTTgaaagataagaaaataaga aaataagattGAAAAGTTCTAGCAGATGCTCCTCAGCCTCCCATCCAGGG GCTACATGATTGAAAACAAAAGCGCAAACAAAAATTAGGACCTCAAAATT AGAACTTTAAAGCTCCTCCCCAGGAACCTACAAATTCAACTTTATCACCG CGCCTATCAAACTTTGAGTGCTATTCACCTCGTGAAAGATATCATTACCC TAGGGAGCTAAAAATCATATAATCAGATATAAATCATATATCTAGTTTTA TTTTACAACAGTGCAACAGATTTGATGGACACGACCTTGACATATGCAAA GAGTCGTTCAAAGGGAAAGTAGGTAGCGTACAGATAACATGTACAAGTTA TGGCACTGACAAGACGATCACGAAGATGGCGGTTCTTGGAAAAGGTGATG GAAATACCATACTAAATGGTGAGTGTAGACAGACAGAGGACAGACATTTC CTTAAAGGGATAATTGGATTGTTTTAAGATACTTTTCCTGTAAATTATTT CAATGGTCCTGGAGCAAAACCTTCAAATCTTTCTGCCCAACTCTTcaaga taaagagaaaaatataattttgaggtaagaaccgtgtaagaacctatttc taaagattttaaatGGTCTAATCTCGACTCTTTAGTAATGTAAGAaaaga aatcgaaatttttacttttgatGGGTAAAAAGATGGATTTGATTGGTTTT TGTCTTTTATTGAAAGGAGAACTTAACTTACAGAACTTAGATTTTATAGT TTTTACGAAACTTTCCTGTAGCAAGATATCCTAACTTCTGGGTTTAATAT AATAATTGATAGGATTGCAAGCGAGAATCTGGTTTTGAGCAGAACCTTTA GTggttatattcttatataaataTGATTTCAGTGCCAACAGACATCCCAA CAGTTACAAAACCTGCTCCTGTTTCCAACGTAAGAAACGGTTACgatttg tttttcatttctgtGTTTCCAGGCGAAGGATGAACCTGTTTTCAGGTGAA CTCGGTTTAACAAATCCTTATTAACTTTTCATAGTAACTCAAGCAAATTT ATTTCCTCCTCGTGTTAGAAGTACAGAGACcatcgagtttaaagccccga caTGGGCTAGAGAGGAATTACAACCTTTCTAAAGCAAGGAAAAGTGAAGT CTTATTAAGATTTGACGGATTGCATCAAGCGCTTTCTGTGTTTTTTAAGC GGCATCAAATTTAGCGAtggatctttttttttcaatctggCGAAAGCGAA ATAAGTGGCTTTCCATCCGAGAGTTTTAACTCCAACAACTTCGGGAATTT AAACTTAACGACAGAGACTTTAATAACCGAATACCCTTTTTCAAATACCA TTTCAAACATTGCgttgaaaacattttgattCTCCAGCACTGACCTTCTT CATTATAGGGCTCATCAGATTACATTTCTGTCAACAGCTTGGAAACAAGT CTTGATTTCTCTTTCAAAGACATTTTCCAAAACACTTATACAAGAGATAA AGAAGGATTTTGTGGTCAATTCAACGGACATTGCGCATTGAACGTCACTT CATTGACAACTGGTAATGGAACGGAATGCAACTTTTGTCAATGCCCAGAT GACACGATATTCGTATCATTCAAACACGGCTGtcaaagtgaatcaaaaat aaaagaactcTTCAAAAGTAAGCATTTTACCAGTTAAAATCATTTGATTT AAACTAGAGTCTGCTTCTTGCTCAACTTTGATCATTTTGAATGACGAGTA CAATGAAGTACTGACACGCCGTTCCACGTCTATTGAAAAACCTTAAGCGA AACCAGGGCTACAGCACCGGAAGGGTTTGAATGTTAATCTTCATTCTTAG GCATGAGAAAGTTGAAACCTTGAACTTTTACATATGAGTACTTAGTTACG ATTTTCAACATCATTTGTAGCCACAGATATCTTGTGCAACGTAGAATGGC GGGAAACGAGTTAGGAGAATGTTTTTGATTGATGAAATTGCCGAACTGTG GTCTTCTGATAAAGAGCTTCAGACAAGAACATTCCAGTGTTTAATATAAG AGATTTGTGGTTGTAAAGTTTCTAGCAGTATGCGAGATGTCTTTGTCAAA TTTCTATGTAAATGTCGATCGAACTATGGGAATTTATTAGTTAAAACGGG GTTAAAATGCTTTACTTTATAGTTACAGGTAAGACAACGACAGATTCATC TTTGGAAATCAACAACAAAACTTTCAGTGCGAACGAAGTTCCACAATTCA ACACAGATTTGTTTATGTTTGGAACATGTATTGCAATAAACATCGATCCT GGTTGTTCATATCAAGAAGGGTTATCTTCATTAAGCAAGTTAAAAGAGAA CGAACACGAAGAGAAACCTTTTTTTCGGACAGCAAACAGAACTTGCAATA TCACAAAGGTGTCCAGTGTTAACATTGTTGAAGGACAGTTGTTAGATGGG GAAGATGGTTTTGAGCAACCTTTTGAGTTGATGTCGTTGTCGACGATTGG TAAAGATTCTTATTGTTTAAAGGTAAAGAAAAGACCGTGATTATTTACAG TTTGTCATTTTAATTGTGAAAAGTTGAGTATTTCAGAATACTAAAACGTC CAAAAAACAACGTCCGAGAAGCTCGTTATAACTCAAAACGCGTTTAAACC AACGTGTACTATTGTAAGTTCACCTGGAAAGAATGCCATAGCCCTGTTAT GTGAGGCTAAAGTGTCCATTGACTAAANTCACCTGGAAAGAATGCCATAG CCCTGTTATGTGAGGCTAAAGTGTCCATTGACATCTTTTTTTAGCCGTGA TGCCTGATTTGGACTTTTATCATCGGTCTATCTTTGATTTCTTACAGTGC AAAAACTTCACATGTGACCTTACACCATTCTCATCTTTGGTCATGCAAAT CGAAATAACATGCACCGGAAAAATCCAGAATAATAAAGATGAGAGAAGAA ATGAATCTTTTGAAGATGTTGTAGAATATGGCGAAGGTCATAGCAGTTCC ATTGTATTCAAGTTCACTGGTGAATCATATGTTAATGGTAAGAATGCACA ATGaaatattcttgatattcatgacacAATATAGCCCGGGATTTTTCCGG GGATTTTccactagttttattgtttaaattcagaaaaagtgtcaaaaacc tggtcttttttgggtgcttctgtATAAAATATTACATCTTCTGTTTGAAA CATGTAAAGGAAAGGTACTTTTTGGTCAGGCTACTTCCTTAAGTTACTTA GGCGAACACAGGTTTAGAAATCATTATATCAGAAACCCGGTGGGCTCCTC TCTCCATCGGCAAATTTGGCCAAAGCATCGCTacaggtttttttataaag actgACCATGATATTAAGAACAAGCAaaagcattttaaggcttcacagac ttttaaacacccaatttctaCTTAACTCTTGTAAAAGAGataacaaattt aaaataaacacATTCCCACAAAAAAAATGAGTTTGCCTTTGTATGATGTT GAGAAGTTTTCATCAATAAACCTTTTCGTAAATTACGTAATGATCAACGC TTaccttatttcaaaatattgccaTGGCAAAGCGAAGAGTACCAAAAGAG TTCATAAGAAGTTTACTCTTTTttaaatagcataaaactagAAGGATATA ATTACCATcctaatggtttcaaaacgaggcaaccGTTGCacttaaaataa tttatgaaataaaatttcatttttcacttgTCTTGTTTTCCCTTTGTTTA GCCTCCGCGTACGCAGATATTTTTGAGGAGAAAGAGGTTGTGGTACCAAC TACTGCAAGTACCTTTGCACCATTCACCGTAGGTTTATTTCAGAATTCAA CCCGTATTCAGTAATTTTCATGGATTTTCTTTGACGCTCTcgaatttttg cctttttttttcACGGAGATGATTATCGGACGAGACTGCTTACACGTAAA ATTTGAACATTGAAATGCAGGAGACAGAAAATTACGCGAGTTTTCGACTT AGCAAAATTAAATCTCGTGAATTTTTATGCTGATTTACAAAAGTCTAATA AAGGTTTAATCTAATTCCAGCAAATCATAATAAAAACACCGTAGATATTT TAATTACGACACATGTCAGCCAGCAATCACGCGATAACATTCTCAACTTT CAGAAACAGCAGAACCATGCAAGTTCTGGGAGATCAAGTTCAAGTTTCAA ATCAACAACCGTCATCGGGATTCTCAGTTCATTGGTTGTGGTTTTGATTG TAATGATTGCATTACTGGTACATACGAGAAAGAGATATCTGAGGAAGTAA GTTAGTCTATCAACGAGCTCCAATCCCCGATCACGACATCacaccaaaaa aaatttaacacaccattactcgaaaaaattctttcataacgtaatttaac aaaaagattcTCTCATTAAACACGCGTCttgcctgtaccagacgaccacg gctttttcctcgacaccaTGATAGAggctatcacgcatcacgctttTTGA ACTTATAGATCACGCCAGCACGCCAAAAAGACATCATGTGATCGTGAAAA CTACTGGGGAGAGGGGAACAATTTCCCTGTCTATCCTACGCTCCCGTTTC TcatattttcacaaatttctGATATTAGAAAACAATAAGACACATCTCTA CACATAACACTACTAAAGGTTTTAGTTATTTTTGGGTGTAACGACAACTA ATCAcagtttaaaataaaatgtagtCCGCTGGTGCCGTACAAAAACCGTT TTTCTGATTACTTACTCAATTTCGGTAGCCAGGCAGGCCatttaaaatta cattttaaaaaacgtcaaattttattatttttaggaaGAGAACGAAATGC GGTCATCATTATATATCGGACGAAAGAGATGAAGAAGAGGATATGAGTAA GTTCTGGACCAATTCTCTATGATGCGTGTATGGCACTGTCGGTTTTTATA TGTTAATAATAAGTTGACTTTATTAGTTCTTTCAATAATACATTCGACTA AGTTATCTACTACTGAAAAGTctgttgaaaaatgttgttcAAATcagggg ggtcagtgtactagaaggtggcatgtatgtgtactacaaggtatttttca atacttgacacccacccacccctgaagtacactatactacatggaaaaat cccaaaaccaccccataccccctatttactaccgggtagtacctggaaaa aaccaaaacaacccCATACCCCCCATTTACTACCGGGCACTACCTAGAAA AATCCggaaaataaagaaactttttcagaaaatcggaaaatcgggtaaac atttttccaaaaatcgNTTTTCACAAATTTCTGATATTAGAAAACAATAA GACACATCTCTACACATAACACTACTGAAGGTTTTAGTTATTTTTTGGGT GTAACGGCAACTAATCACAGTTTAAAAAATGTAGTCCGCTGGTACCGTAC AAAAACCGTTTTTCTGATTACTTACTCAATTTCGGTAGCCAGGCAGGCCA TTTAaaattacatttaaaaaaacgtcaaattttattatttttaggaaGAG AACGAAATGCGGACACCATTATATATCGGACGAAAGAGATGAAGAAGAGG ATATGAGTAAGTCCTGGACCAATTCTCTATGATGCGTGTATGGCACTGTC GGTTTTTATATGTTAATAATAAGTTGACTTTATTAGTTCTTTCAATAATA CATTCGACTAAGTTATCTACTACTGAAAAGTctgttgaaaaatgttgttc AAATCTgttcaaattttaaatatgaCAATTTTAACATGTTTACCGCCCGC CATCAAAGAAGCggtaataatgtgtatttcataACCAACATGCATATTTT GGCagtaaaatagcaaaaacatgctcagaATCATGAAAATATTATCTCAC AATACAGTCATCCACGAAATCAGATCttaaaatcgcgaaattcaatCCAC GCAAAATCAATTTCATACGCGGATATATTCGAGCATCGTGATTCGAAGCA AGTCCGAGGAGGGGgagggcagtcaggcaaattgactgACGAGTATGtac ggcggttaagggtatgtttttcaaggTAGCAAAAATGCAGTGTGAGTAta gacttttgataaatgcactgtactCAAGTACCACAAAAACCAAGCTAAGA CCGATAATACTTTATCATTTCAGATTTTGTCCAACTCAAAGGCNCAAGTA CCACAAAAACCAAGCTAAGACCGATTATACTTTATCATTTCAGATTTTGT TCAACTCAAAGGCAAATCAAAAGGCAATAAATACTCCGAAGTCGCCATTT TACAACAAAGAAACACGGACCAAGTAAGGTTTACTACTACAAAGGTTATT GCTCCGGTTTTTCtaaattgtaaaatttcaaagatttttcttttgtttgt gaAAAAATCTTACACGAGTTACCCTAACgagttcttttttattttgggaG AAACTGTCCAAAGGGAATAAGAAGAAGTTCTCTCGGTCAATTTAAGCAGG ACTGTGAGAAAGTTTACGCTTGCAATGGGCTCACTACGTTTGCTAAATAC AACAATGACTTTCCAAAGCACTTTCCCGCGGTCATTTATCTTTTCTATGA GAATTCTTTATAAGCAGTATTCCCACATTTCTGTGTCCAAGGCATGgcga cgcttgctagtctagcTTTTTGCTGACAAACTATATTTTTTGACTCGTTC ACAGGACACAACTTTGAAAGGGAAAGAAAATTTATACTACGAAGCGTCCA GCATGGGGGATGTGAAAGTCAACAGTCTAtacactgaaaatgaaatatca cAGGCGGGTTATCTACAAAACGAAAATGATATGTATGGAGTAGAGTATGG TACTTTACACGGTGCAAACTCAACTCTTGAAAGTCAAAACAACATGTATA GCACTGCTACGAACCTGTTAAATCCAAAATCTGAAGCTGAATTAAACTTT GGCNAAACAACATGTATAGCACTGCTACGAACCTGTTAAATCCAAAATCT GAAGCTGAATTAAACGTTGGGTTACCTCCACAAAGTCAAGTTTCGGGTCA TCTCTATGCTGGTGTTACTGATCAGACCATATTTCCTTCACCAGGGAATT TATGTGCTACAACTGATACCCAACAGGCTGGATATGCAGTTGTGGATAAG CAATTATCTCCACAATTTAGTAATGCAAGTATTCCATCATCTCAACATCC ACAGACAGAACATTTGTACGCTTCTACTGACAAACCATTAACTCCCCAAT ATCAAAACAAGAACATGATATCTCCACAAGTTCCGACCTACAATCTCTAC GAAGAAACAGAGCCCGAAGACCCACATCTATACGGAACAGTCAGCGATCT AAATACTGGATATCAACCTCCGGGGAAAATTACAAATACAGGTAACTCCG ACTATGATACGCCAAAGATGCTCAGGATGAGCCAGCTGAAAGATATCAAA CCAATTAACAACCAAAGTCATGACCGAGAGACCGGAAACTTGTATTACGG AAAGGGACAGAATATTAAAGAACCGTATTACGGAAATATGGATTCTGTCA ATCAAAAAGACTCAGAATATGCGTATGCTTCTGATAAGAGATgttaacca aaaaaaaaaatctcaggtGTCTAAAACAGGTGGtattgaaaaacgttaaa acttTAATTGATAACTAAAAATGCAAGGTAAAATTAGGAAAAAACTGTAA GAAAATAAGAGTTGCACTTTTAATTGATGCAATGTTAGCCAATTCAATAT TTCATAGATTACAGATTAAAAAAGAATAGAAAGTTTTACCTACTTTAAAT TTAAGATGAAAGGGGTCTTactttttgggacacactgctCAAGATTTTTT CTCTATTATTGACATTACTTACATCATAATTCAGACAGTGGCGGATCTGA GGAGGAGGTGCTTAGATTTTATGACGGGGAGCCTTGATTTTCTTATCAGG AGTATAGCTAAAAGGGACACTCTCCGTCATGAATTTTGGTCACCACTTGC AGTATTTTTCTTTACCGAATTTTACCCCCATCCGCACTTATTGTTTGTAT TTCTGTAGATGATACAAACATTTTCGTAGTATTAACAAGTATTTTGACTA AAACatcattttgtaaataaaaatcctGTACATTTTGATCATgtttactt ttaaaaatcc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002802TCONS_00002802Clytia hemisphaericatranscript
TCONS_00002803TCONS_00002803Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002802-proteinTCONS_00002802-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:382500..391709 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0 0.01 0 0.15 0.18 0.16 0.09 0.23 0.2 0.37 0.38 5.61 4.84 3.89 3.46 0.85 0.77 7.42 5.64 2.14 2.1 0.95 1 2.29 3.28 0 0 0.12 0.2