XLOC_001471 (gene) - C. hemisphaerica

Overview
NameXLOC_001471
Unique NameXLOC_001471
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:878515..884777-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001471 ID=XLOC_001471|Name=XLOC_001471|organism=Clytia hemisphaerica|type=gene|length=6263bp|location=Sequence derived from alignment at sc0000021:878515..884777- (Clytia hemisphaerica)
AGTACAAGGTCATGTTGTACTGAATTATAAATTGTTAAAACCTACGGATC GCAATAAATAAAGATGATGGAATATCAGCATGTATACCACGAGGAAGGTA ANCATTGGTTGCCAAACCGTTGATTAAAAATTGTTAAAACCTACGGTTCA CAATAAACAAAAATGATGGAATTTCAGCATGTATACCATGAGGAAGGTAA GATGGTGTCTCAAATTGATTCTTTGTAGAATTATCTTTTCTTTTAGATAG TGTTGTGAATACTTTCCTTTTTTTTGGGGGGGGGGACGGGGTGATTTAAT AAACATTGGTAATTTTTTTGTAGTTTTTTTAAATTATTCTCCTTTGGCTT GAGTATGATATGCATATCGGGAGGCAGTACTAGCTTTGTGAAATTACGGG TGTGTCCGAGTCAAAATTCTAAAATCGAGCCTTAGAGAGACTGACTTTTG AAAATAATTGTCCATTTTTTGACGTTCTTGCCACCCGTAAAGAGACGATT TCGCCAAAATTTATGACCCTCGGAGGGAGTCGATTTTCGAATTTGGTAAT TTTGGAACCCTTACAAAGACTCAATTGCTGCTTTTTAATGATTTTGTATC CCTTTGAGGGACTTTCAAGGATGTGAAAAAGGAATCCTTATGGCTCCGAC TAACCCGGTATCATCCATTTGCCTAAGTACCCCCACCCGGATGCATAATC ACTCTTTTAAAACACATTTATTGGAAGAATCCTTGACTTTTAGCTCTCAG CTTTCATAAATATCAATTTTACTAAGCAGATATTCAATAGGTAAAAGTTA CGTTGGTTATTGAGATCTATTAACCCGAGGTGATGTAATATACATCACCG AGGGTTAATAAAACCAATAACCAACTAAAACTTATTGAATATATGTTTTA TTATATACCTTAAGCCAAAAACAAAACACGAGTTATGTAAATAGTCGAAC GATTCGCATAAAACACTCCCGTAATCGAAAGTTCGAATGTTTTTCTTATT TATTGATTTTCTTAAATTACTGTGAGTCATAAGATTTGTTCATGAAATTA ACAATAGATTTATTTTAATGAATTTCTTTGATAACAACAAGAGCGACAAA AAAATCAAACTTTGAAAGCAAGATTTAAAAAAAAATTCCACCGTGGTATA ATAGCCATGGTATATCAGGAATTATTCAATGGCTGTTTTTGCCTACAGGT ATATAATAATATTATTTATTTCAGCTGAGATGCAATCAGTTGAAGATTTG GCGTTTGGTCTTGATCGAACCAAAGATATGAACATTGTCTTGATCGGACG AAGCGGCGTTGGCAAATCAAGCTGGATCAATTCTTTTTTCAATTATCTTC TACATCCATCGTTTGATTCAGCAGTGAGAGAGGGTCCAGTCTATGCACCA GTTTATTCTAGGTTGGTTAATACTATTTTCATAACAATTTTATAAGAGCA AGGGGGAGGGCAAAATATTCCTGAAATAAGAATAGTTTAAGAATATCCCT GAGATTGCAATGGTTGAATTTTAATAAAGTGAAGTGTCGAATAGTGAAAA TTGGCACTAGAAGGTAGAGAAAGTACTTCAACATCATTAAAACAAATTAA TAGTCCATTTTCAACTACAATCCATAGATTCTTTTTTCAAGTACATTTGA GAACTTCTCAGGATTGTCATATACGATCTTAAATTTCATATTAAGAAATC TTCAATCTTAGAGGGTTATCACTGTGAAAAATGTTCAAAAGATATTTATT CAATCAAAAAATATAAAATATCTTAAATCTACTGCCTGGTGGACTAAAAA TTTGGCTCCTTTTTGTTGTTTTGTGGTGATTTTTAAAGTCAATTAGTGAT ATACTTGGGATATCTTTTGAAATAATATATTTGAACAATTTCTTCAGCAG AGATGACATTCTAAGATCAAAGAACCACTGTTATGAAAATGGAAATTACA GGAGAGTTATTCACGAAGTTAATTTTTTTCTTCTCCATTTTTTATTTTCA TTTTACAAACTTTTTAAGCTTTTTCTATTGGTAATATTCCACTCTTGAAT ATCTTTTCAACAAGCACAAAACCACTATTCATTTCAAATTCTCTAAAAAA TCACAGCTTTTTTTGTCTCCGGTGTATATTATATTGAGACAGATATTACA ACGGCAGGTTTTTTGGCATGAAAACTTTTACCTGGCCTAATTCGCGAGTC CCCTCTCCAATAAGTTACAAAATGCTATCTACTTTCGAACTAATCACACG CGCTTACGTCCCACTTAAGATACTACGGAACCTAAATGTTTTCCCACTTA GTATTATGTAGAACAGAATATATAAAAATAAGGCGTCGGTGACCAAAATA CAAAGAACACGTTCAGAACATTTTAAGGCTTTGAGGCTTAAAATTTGGAC AAAAATCGAGTGAAAATCGACAAACATTGTGACATACCCGTCACCTCGCA AATCTAGTACCCCCGGACTAGAGCTTGATAATAGTGCCAAGTTTTAAATT TTGTTCTAGGTTTAAACATTATCACGAAGAGGCTGATGACGTGGTCAATA CAGAGGACGATGATGACGATGATGATGATGGTTTCGGTTGTTTGGTCGAT ATCGAAATCGGTGACAAACATCAAGAGAATGTTAACCAAGAATATCGAGA AGGAAACACTGGTGTATCAGCAACAATGCTTCCGATGGCTCATCGATTAG AGCCTAAGGATGAAAAGTACAGTATTACTTTGATTGATACGCCTGGCTTC TGTTCTACCGCCCCTGGTGGCGATACCACCCTTTCAGAAGCTCAAGATAA AAAGAATATCAATCTCATTCTTAACCAACTTGGTCAATACCCTCACATTA ATGCATTTATCATCCTATTGAGNTATCAATCTTATTCTAAATCAACTTGG TCAATACCCTCACATTAATGCATTTGTCATCCTATTGAAACCAGGACAAG AGAAGCTTGATCCAGGATTTGCTACATCTCTTAAGACTCTATTCAGCCAA CTTGACGAATCAGCAAAAAGCAATGTCATCTTTTCATTTACTCACTCGAA CAATTGCGACTTCAATGACATCCAACACCTTCCAGCACTGAAAAACTTCT TAAAGAGCAAGGTNAAATCGGTGACAAACATCAAGAGAATATTAACCAAG AATATCGAGAAGGAAACACTGGTGTATCAGCAACAATGTTTCCAATGGCT CATCGATTAGAGCCTAAGGATGAAAAGTACAGTATCACTTTGATTGATAC GCCTGGCTTCTGTTCTACCGCCCCTGGTGGCGACACCACCCTCTCAGAAG CTCAAGATAAACAGAATATCAATCTTATTCTAAATCAACTTGGTCAATAC CCTCACATTAATGCATTTGTCATCCTATTGAAACCAGGACAAGAGAAGCT TGATCCAGGATTTGCTACATCTCTTAAGACTCTATTCAGCCAACTTGACG AATCAGCAAAAAGCAATGTCATCTTTTCATTTACTCACTCGAAAAATTGC GACTTCAATGACATCCAACACCTTCCAGCACTGAAAAACTTATTAAAGAG CAAGGCGAATCTTCGAATTAAACGTAGTAATGTGTTCTATTTCGATAACT CACCCTTCTGCTATCTTGCAACTGCCGCCAATAACTACCAACCAACCGAC AGCCGAAGCAAAATGCAAGACTGCTGGGACAAATCCGTTAAAAACTGTCT TAATATGCTTGGCCATATCAACCAATTACCAGCTCACAAAACCGACACTA TAATAGCCATTAACGACAGTAAATCCATCATCAAAATGATGATTGCACCT CTCGTTTACGTCTGCAAAATCAATGAAGAAAATTACGCCCTCGTCAACCA AACCTATGATAATCTGGCTAAGCAGACAGGAAGGAGTGTCATCAAAGTCA AAGACGATCCTAAGAAGGACCAAGGAGGAGCTGATGAAGAAATAAAAGAT GAAAATGCTAATTTGAATCTTGAAGGAGCAAAAGCTATAGAGGAGGAAGA GGAGCCTCTTACTCAAGAAACAAATATAGATGAAGCAGACAGAGAAGAGA ATGGTGAAGGAGCGGAGGACCAAGAAGTAGAGGGTCGAAAAGAAGGTTGT GGAGGAGCACTTGATGGTATTGATCTTATTGAAATCAACGAGAAGGTTCT AATCTACAAGAAGCTAAGAACGCCGATCACAGTGTGCAACAATCCAGCTT GCTTTAAGAAGCAAAGTATCTTCGAGGTAACCTTTCGCTCATAACTCTCT AAAATATGTCCATTGAGAGTCCATAATAACCGATTTTGTCTACTCAACAA AAAGCGAACGATAGTTTTTAAATCATATTTATCAATTAGTTGCTTTAAAT CTAAAGTAAGTAAGTCTGCGACCGCAGTCGCAGCCCAAAGGCTCCTCTTT CGATAGCTATCTACCCGAAGGAAGGGGAGGGCGCCACTCTTTTTCCCTGG ATTTCTCTACACACCCTTGATCCCAAGCAGAGGGGCATCAAGTACCATTT TGAGAATCTTTGGTATGACCCAGCTGGGGGTTGAACCCACAACCTTGAGA ACCGTAGCCGGATGATCTACCCACTGCACTACGGTCGCAATAAGAACGTG GTTTCTCTTAAATTTTTAATCTGCCTGCTTGACAGTGTTTCAAAAAAGGT GCAGCCCCTTGAGTTTAAAGCGCAAAAGGCTAAAGAGGAATCTTCAACCT TTCTCAAGCAATAAAAAATGATGCCTTACAAACTGTAAGGGTTTTCGTTC ATTGGTTCAAGAGATTGAACAATATTTTCGAAATCTAGCGATGGATTTTA CTTTAAATTTGGCGTATGTAAGAAAACAACGCGGGTTACGTGATTCAAAT GGGAAATAAATGGCTTTATTTCCAATCCAAGAAATTCAATTCTAAACCCT TCGGCGATTTAAACTCAATGGTATGGGCCTACTCCGCCTGATTGACACGT CACTGGTTGACGCATTGCTTTCGGGTATTATAACTTGTTTATCCCTTTTA GGAGGGGAAAGAAATTGTCAAGAAGATGTACCACAACGTGTGCTGCCATA ATTGTCTGGTCCCCTTTGTTTCACACGACAAGCCTGGCTCGTTGATGTTG CTTCTATGCAAGGCTTTTGACTGGTCACTGAAATGTCGAATATGTGATCA TTCTAAGGATGAACATATACACATTGCTTACGAGTTGAACGAAGCTCATA AAGTCTTTGCATTGGAGATCAAGGATATCAATCAACGAAAGAAAGATCTT GAGCTTGAATTTGAAGTCATCATCGATATCCTTGTATTCTTTGCACAGTT CTTGAACCATCATTGTCTGTTGAAAGAGGAAATGCTGGTCAAGCAATGCA TTGATAGAGAACTGGTGAAAGTCAGTCAAGATCTTGGTGATTTGGTACGC CTCCAAGATGAGCGCCAAGAGAAAGTTAAAGAGCTTTCCGAGAATGACCT AGTCAAATTGCAAGGCATCATCAAGCAAAACAAAGACAAACTAAAAGCCA TAGACGAAAAGGTATCATTGGTTACGAAGATGGGAAAACTTAAAGTTGAA ACGTTGGGGGAGATTGATGAATTCGAGAAGACTGCCATGGTAAGTGAGCT GCATGATCTGGCATCTAAACGAAAATGTTTGCTCAGTTCCAGTGAGAAGA GTCTCGATCAGGAGGAGCTTTGTCAGGTTTACGACAAACGTCGAAGCAAA TACGTTAGTCTATTGCAAAAGCTTAGAGAAGATGAAAATCTTCTGTTACA GTTGATTGAATTAAACGAAAGCTGTGACAAGATGAAAATGTTAGCTAAAG GTTTGAAAAAGATACAACAAAAATATGCTGATAGAATGCAGAATCAAAAG CACAGTTTGGTACCCGAAAGCGTTAATGCCAAAATAATAATGCTGACAAA GTTACCACATAATGGCCATATCTTTAAGGAAATTCATGAAGAATTGAAAA AGTCTAAGACCGAAGGACTCATCCAAGACAAAGTGTATAAGATGGGGGAG CAGTTGTCAAATTTACCCCGACGCGCATATCAAAAGATCAAGAAAGCTGC AGAAAATGTATACCATTCATTACAGAGATAAAACGAAACTAAGTGTGATT TTCAACAGATTGATGAAACGTTAGAAACACAGATTTTTTCCCCGAACTTT CTATTCTTGTATCTTGTAAAGGAACACCTAGTTTTTTATATTAAAACTTT CTTGAATTTAGAACCTTTTTTGAAGACGAAAAGGATAAGGAAAGAGATAC GGCTATAGTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002738TCONS_00002738Clytia hemisphaericatranscript
TCONS_00002737TCONS_00002737Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002738-proteinTCONS_00002738-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:878515..884777 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.02 0 0.05 0 0.04 0.06 0.11 0.14 0.13 0.14 0.41 0.23 0.8 0.88 0.16 0.35 0.41 1.12 0 0 0.02 0.02 0.02 0 0.77 1.45 0 0