XLOC_001459 (gene) - C. hemisphaerica

Overview
NameXLOC_001459
Unique NameXLOC_001459
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:592892..598387-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001459 ID=XLOC_001459|Name=XLOC_001459|organism=Clytia hemisphaerica|type=gene|length=5496bp|location=Sequence derived from alignment at sc0000021:592892..598387- (Clytia hemisphaerica)
CCACGATTTCCATTTTCACTTGTGTATTTTAGATGAATTTATTTGTGGTG
AAAATTATACTAAATGTCACGAAAAAGCACTATGCATATTAGATGACGAA
AATTCCTCATGTCAATGCAAACAAGGATATATTGGAAATGGTGAAAGTTG
CAAGATTAATGGCAAGTCGAGCATGTGTTTTGGAATGTATTTCTTTTCAC
GAAATAGACGCCTGGTTTGAACCTCTTTTAACAATTTGGCCCTAAAATTA
AGCTTGACAATTTTTGACAATTTTACCGATTTTTTATTTAATTTATTGAC
AGCTTTTGGAACCAGGCCAAACACTTTAAATTTTCTTTAAACCTTAAAGT
TCAGGCCCGGTGGAACAGCCGTAAAGGTGGGGAGGCTGAAGGCTCAAAAT
GAAATGAAATTCGCTAGAAATTTGAGAAAGAAACCTCATTTGCTCAAAAG
TTGGGAGGCTGAAGTCTCCCCAGTCTCCCCGCTTCCAACGGGCCTGAAAT
TAACGAAATTTGACGGGGATAATAGCCACAATTTTCTATTTCGTTCAACA
GCAAGATTATCGATTATATAAGACAATTGATTTCATTTTTTATTCCTCTC
AGAAATCAACGAATGCAAACTTAATTTACACACTTGTCATGCGAATGCGA
CTTGTATCGATACTCATGAACATTATCAATGTTCTTGCAAAGATGGGTTC
ATTGGGAATGGAACGATTTGTGAAGGTAAGTGTGGATAGTTCATGAGTTT
CACACGTTTTCGTCTTTCTTAGAATTTATAAATGGTGTGGGGACACGTTC
GAGCGAATGTATGTCTTCCTTCTGCGCGGACCTGCCTGAATGATAGAACG
GTGCCCAATAGTAAAACTTCAAACTAATTCGCTAGAGGACAGAATCAAGT
AATGCAGGACCAATTTAGGAGGTTCTTGGATCACTCGTTGACTTTTTGGC
TCAAAATCTTGCTGGAAAGACTCACTTTTGATTTTTTTTGCTTGACCATG
AAACCCAATCCAATTTCTACGAGTTAGACAAAAAATGACGATTTCTAACT
CAAACTGGACATTACAGGAGGGCTTCGTCCTCCTACATAGCCCATGTCTA
GTATACTCGTAATTTGTACTTAAAGGGTTAAAAGTTCACATTATTTCGGA
CACAGTTAGCTATCAAACCTTTATACTTTTTCTGGGTACACCCAGTATGT
GAGTGATTTAAGTACATCTGACACTCTTTTATTCGGTTTTCAAGGGAATC
GGATTTTCATCGAACAAGGGATATGACTGCATCGAATAGTAGAACATCGT
TCATGAGAGTTTCTAGTTGACGTCGACTTTCAATATTATTGCATAGTGGA
GCGTGTCGAATAGTAGAACGCCGAATAAAAGAGCGTCAACTGTATTACAC
CCCTGTGTCACAGACCCACTGGGGAATTGAGTTTGATTTCTTCCCCACTC
GAAATCCGATGTTTTAAAAATTGCACTCCAAAACCATCCCCACTGGATTT
TTTAACTTTGGAACAATATAATTTCTATCCCCATCGGGATTTCAATAGGA
AGTTTTATCCCCACTGAGGAAAAAAGTTCCACCGGGGCTGTGAGACAGGG
GTGTTGTATTGCTAGTTTTTCTTTGATCATTTGACCATAGATTTTGATGA
ATGCAAAGCTGAGGTTGCTCATTGCCCTACGAATTCGACATGTGTCAACC
TTATTGGATCATTCGATTGTTTTTGCAACTCTGGTTACCAGAAGTGTGAA
AACACGTGCAAAGATGTCGATGAATGTTCGGACCCAGACCTCAATAGATG
TCATGCAAAGGCGAAGTGTGAAAACACTATTGGATCTTACATGTGTTTCT
GCCAAAAGGGATATTCAGGTATTGGGCAGAACATGTCTTTTTATAAGAAC
AATTGTATAAGAATAAACAGCTTATATTAAGGACAAATCTAGAGCATTTT
TAGCCTTTTGGACTCTAAAACACCACAATTTTTTAGAAAATCGTAAAAAA
TGATCACAAAATACTTAAAACGTTTTAAGAGCATATTTAGGCTTAACCTT
TCCAGCGCGCAACATTTTTATATCTTCAGCCCGTCTGCGCGCAACGTTTT
TTGATGAAAATACAATTTTCACGATAACCGTTATAACTTTTTGAAAAATT
AACTTCAGAAAAAAACCCTTATATTTTTGGAAAGCCCTACCTTTCCCCTT
TCTAAATATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAAATTATAGAGAACTGAAAAATTGATAAAAACACTTACTTTT
TTCTTTAGAAGGTTTCTTTATAGTTAGGTAATACAATTCCATACTTTTGA
AAAGCCAAATTAAACTCTAAAACACTTTTATAAACCCTTACTTTCATAGC
TAACTTTCTGCCTCCTCCAAAATCACGCAACACAGCTTGGTCTACCATTT
CTATTTTTGAAAAATGTTGCGTCATACCAAAACAAACCCCGATTGTTTCT
TATCGGAAATTTCACGCTGATTCCGATTTTTTAATCGGTTTTACCGTACC
TCTGACGGTTGGGGCGTAATCCGACCAAATATAAAGGTCACCTTAAAAAC
GTATCAGATACGTCTTTCGGAACGTATGGCGAACGTATCAGATACGTCTT
TCGGAACGTATGGCGAACGTATCAGATACGTCTTTCGGGGCGGAAAGGTT
AAAACTAAAAAAGATAAGAAAATCTGAAGGTTTCGAAAACCTTTGACGTT
CTTATAAAAAAAATTGTAATGCTCAATGAACAATGGTAACCCCCCCCAGA
TACCAAGGTGAAGTTATAAGCTTACTTTTACGAAAGATTAGCCTATACAT
CACAGCTTTTTTTCTTACACAGTAACGCACGTCTGTTCCACTTTACGATT
TTTTCGAATGTTTGGAGCCCAGGTTTTCGTACCGTGAGTATCACAGCTCG
AATAAATTCGATAATTAATATTTTCTCTTTGAAAACTTGACCTCTGATAC
TCAGGGTAAGGTTTTCGGGCTCTGAATATTCGATTGTTTGACGTCACTTT
ATGCTTTTTAAGTCCTCATAGTAGCGAAAAAATCGAATATGAATCAAAAC
ACCTGAAGACAGGCTTTCGAAAAGACTTATAGTGTAACTCACTCAAAAAA
CGGAATAAAAAATCCTTTTGATAACGTAATCGTGGCGTAATCGCTATCCA
ATGACGTGATTTAGTCAATTCTGTAAACCGATCCAACGTTATCTTTTGCA
CCCATATTAGCGAGGAGCATGGGAGAAAGAATAACATGATTATTTGGTAA
CACTATTTAGTTAGAAAATTTGGTAGAAATTCCGTCCCCGGTGGGGAAAA
TACCCTAGAATTTTAGCCCCGCTGAGAAAATTTCTTTAATTTCACCCCCA
TTTGAAATTAAATGTTGCACTCCAAAACCGTCCTGCTGGATTTTTTAACC
TTGGTACAATAGACTTTTCATCCCGATTGGGATTTCAGTAAGAAATCTTT
ATCTCCGCTTGCGGGAAATAGATCCACCGGGGCTTGTGAGACAGGGTGTA
TTTACCCTTCACTTAGAATCACTGATTGAATCTAGCGCTTTCTTTGATTT
CACGCACATTTTCGATGGAAAATAAGTGACCTCATTTTCCATTTAAAAGT
TTCATCTCTAGCTCCTTCAGGGCTTTGAACTTAATAGACAACACTTTATA
CTCAGCTAGCAGATGTTGTATCATTTTAAGAATGAAGAGGATTGATTAGT
AACACCATGCAGTTTAAAACTGGAAGGGGTAGATTGGAATCTCCAACCAT
TCCCAAGCAAAAAAAGCGAAGCCTTAAGATTTATTCAGCACTTAGAATAG
TGGATTGAATCTAGCGCTTTCTTTGATTTCACACACGTTTCCGATGGTAA
ATAAGTGACCTCATTTTCCATTTAAAAGTTTCATCTCTAGCTCCTTCAGG
GCTTTGAACTTAATAGACAACACTTTATACTCAGCTAGCAGATATTGTAT
CATTTTCTGTGCGAAAAGTAACGGGATTAAAGTATGCCACAACGAATTAG
ACCTGATATCTACAAAAATTTCTAAATTCATTGACGTACTAAGCTATGTT
ATACGCGAAATACACTCTTGTATATAAAGTACAACGAACTGTATTTGTTT
ATTTTCTCCTTACTAGGTGATGGATATCAATGCGCATTTAGGATAGGAAA
TAAGTGACCATCCAAGAGTTTTATCCCTAGCTCCTTTGGGCTTTAATTAT
GTCACAACAAACTGTATCGGGTTTTCTCCTTTCTAGGTGATGGATACCAA
TGTGGAGATCTCAATGAATGCAGCAACAACTCGATGAATAATTGTCATCA
AAATGCTCTTTGTTTGAATACTGAAGGTAACACCCCTGTCTCACAGCCCT
GGTGGAATTTTTTCCAGAGTTGGGATAAAAATTCCTCTTGAAATCCCGAT
GGGGATAGAAATTCTATTGTTCCAAAATCCAGTGGGGGTGGTGTTGGAGT
GCATATTTTAAACATTGAATTTTGAGTGGGAATGAAATCAAAGTCAATTT
CTCAGTGTGACTAAATTTCCAGGGTATTTTCCCACCGGGTGCAAAATATT
TGCCAAATTTTCCAGTGTGGCTGGGGGTACCAGCGGGTATTTCTGTCTAC
CGTGAGTGGTGAGTATCACAATGTATAAATCTAGACTGTTATAGCGAATC
GAAGTAAAGTTTAGTGCCTATGACAATAAATGATACAGAAATCTCGTCAA
AGTTCAGAAAAAAGGTTTTCAGAGCATTAATTTTAGAATCTCTTTTATTT
CTATTTCCCGCAATAAGTAGTAGAGTGCAAACTGTTCTTGCCCTCGCTTT
GATTGGACGATCTCTATCGGATAGTACTTTCATCGTACAAGGGTGTTAAC
AAAATATTAGTAATTTTTAGGTTTTGCTTCTTCGATCCTAGTTCCAAGCG
TTAAAGATTCAAATAATAACTTTTTCTTCAGGCTCCTATCAATGTTATTG
TCAGAAAGGTTTCTACGGGAATGGAAGAAAATGTTTTGATTTCAATGAAT
GTTATTCTCCAACAACTCATAATTGTCATCAACATTCTAATTGTGTCAAC
AACATCGGTTCTTATACATGCCAATGTAGGAATGGCTTTATAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002700TCONS_00002700Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002700-proteinTCONS_00002700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:592892..598387 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0	0	0	4.29	2.71	66.13	69.33	52.18	87.34	26.47	62.25	0.04	0	0	0	0	0	0	0	0	0	0	0	0.07	0	0	0	0	0.07