XLOC_001455 (gene) - C. hemisphaerica

Overview
NameXLOC_001455
Unique NameXLOC_001455
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:484074..493054-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001455 ID=XLOC_001455|Name=XLOC_001455|organism=Clytia hemisphaerica|type=gene|length=8981bp|location=Sequence derived from alignment at sc0000021:484074..493054- (Clytia hemisphaerica)
GTAATCTCAGAAGAACAAACAAACATGAAGGTCATCATTTTCACCGCTTT
CTTAGCTGGTAAGTACTCTTAAAATTTCAAGAAAATAATTTCGCCGTATA
AAAACATAACATCGACGGATGAAAGTATTAACTTTGAAAAGGAACCAATT
ACTGAAGTTATTAATCTATTTCACAAATCACTGAATTTTGAAGGTTTAGT
TTTTCAAAATTTTTATGGTATAATTCAACTAAATATTTAATTATCTAAAT
CTTTCAGTTGCCGCCGCCCTCGAGGTTGGAACCCAAACTGGTACCACACC
ACCAGCTGTCCCATGCCCAGACTCTCTCTGCAAAGGAAGAGCTGACGGAA
ACTACGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGATACTACAGCCGATACAACCCA
CACTACTTCCTCCAATGCTCCAACGGATTAGCTTACTGTCAAGCTTGCTG
GCCATTGTCCTTGGAATTCAGTGAACCATGCAATCAATGTTTGTACAACC
GAAAAGACGAATGTGTCACCACACAGCCATGGGAACCAGCAACCACCTTC
GAATGTCTAGACAAATGCCCAGCCCGTGGACCACACTTCAGCGGAAACAT
TGAAGACGATCACAACCCACACCAATACGTCGCTTGCTTCCACGGGCAAA
CTGTCGGATGCATCGCTTGCCCAAAAGGATTACAATTCAACGAGAAATGG
AATGCCTGTCTGTACCAAGGAAAATACAAGACCGAACCAGAATCCCCACC
AAAACACTAAATTATTTTCAGTTTTTTTTAACTAAAAGCGAAAATCTTTC
TTTGTCTTTTTTCCATCCTTTCATCTACACTCACTATACTTTCAACACTT
TTCCTAAACTTCCTATTTTCTTTACGTCTACATTTTGTAATTTATATCAT
TGATGAAATTATTTATACTTTACGAAATATCTTGAATACTACCTTAATTC
GAGTATACTTGGTTATATAGGGGGGATATATTGTTTCCAGATTTTCAAAG
AACTAAAACCATCTTCTCAATCGTACAAAGTAGAAAGATTGAGTTTTTTT
GAGAGGGGCTTCCAGTCGGAACCGATGGAACTTCAGTACACCCTCCTCTC
ACAAACCCACTGAAGAAATTGGCCAAAACATCCTCCCCAGTGGAAAATTG
TACTGCAATATTTTTTCCTCGTTGAAAATTGATAATTAAATATTGTGCTA
TTTTTCCATCGCCACGAAGTTTTAACCCTATTTTTATCAGGGGGGGGGGT
GTTTTCCACCAGGCTGGCACTCTTTTGCTAATAGCTCACTGAAAAATTTT
TTTAACACTCTGAAAGTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCCCCCCCCCCCCCCTTGAGAATACAAAATCCGAAAAAGCCTGATAAT
AATAGGGTTAAAACTTGAAAACAATGGAATTCAAATCCCAGCAATAAAAA
ACATGGGTATATCATTCCTCATCGAGTTTTAGTTCGTTATTTTTACGAAA
CTTTTTGAAAACAGCCTACCAGGTCGGTGAGAAGTAGGTTCTTCAATCTT
TGAATACAAACCACATAATTCAATATAAAATTCGATTGATTAGAAGTCAA
AAACCACTCATTCCTGAAGCAATAGTTGCTATGATTGGAAATATACAGTA
AATTCTTTATAACTCGAGCGCACACTGGGAACAGAAAACTTTTTCCTTCT
TTGCAATACATTTCTTTCTTTCTAGATAATCCTTACAGAACCGGTAGATT
TTTTTCAAAAAAATAACGAACTGAAACTCGATGGGGATTGATATTTCCAT
ATTTTTGTATAACAGGAGATTTAAGTTCCATTGTTTATATGCCATTAAAT
TTTGTGGGGATTGGGAAAAACAGCATAATATTTTGCAGCGAGGATTGGTT
TATTTGATTAAATACAGTGAAGAGGAAATTGGAGTATAATTTTCAGCTTA
TTAACTTATTCAACTTAATTAATGACAGGAAGTCTGTGGTCAACAAATTA
GTACCTTGAAGACAGGTCTGCAAAATACACATTGATCATCATCCAGAGTT
CAGCAAGTTTTAAAGTTCTTCTGTACCCAAAACGAAACTTATAGCACAAA
AGGATTTTTTTTCTTGATCTTACAGCACTTTTTTGCTTAATTTTAGTCAT
TTTTAGTCATTTTTTATCCATTGAAGGTATTGAAAACCTGAACACATAAT
TGAAAAAAGAGTTTTGAAATCTTTTATGTAAATTATGCTTTTGATATGTA
GTGTTTTATACGAGCCCTTGATAATTTATAATGGATTTCGACTTTTGAAC
AGTTGAATTCTTCATTGAAGACGTCACCCTTTGCCATACATTAAAGTTGT
CTTAGGTCTAATTTGTTTGTGTACCACTCTACCAATTCTACAATCGAATT
GAAAATAGGTTGTTGAGTTCATAAAAGATGTTGCAATACTTGTTGGCCCT
ACACAAGTATAACCGAAAAATCTAGAAACAAGCAAAAATCTATCAAAATT
TAAATGTAATTTTCGACGGTGAATATTATAAAGAATTGAAAAATACAGTT
TTTTACTTTCAAAATAACCACGGATGGCCACAAATTTTTCGAAAGATGCT
GTAGATCAGTCCGACCTGGCCTAACAAAGGAGCTAAAAATCCGCAGCCAG
ACAACAAAAATAATCAGTCAAAATCGTATCGAGTTGGGATCACAGGTATT
TCATAAGATATAAATAGTTCAACGATTTATATACATTACAAAATATATAT
ATTAAGAAAATAGGAAGTTTAGGAAAAGTGTTGAAAATCTAGCGAGTGTA
GATGAAAGGATGGAAAAAAGATGAAGAGAAAGAATTTCGCTTTTACTTAA
AAAAACTGAAAATAATTTAGTGTTTTGGTGGGGATTCTGGTTCGGTCTTG
TATTTTCCTTGGTACAAACAAGCGTTCCATTTCTCGTTGAATTGTAATCC
TTTTGGGCAGGCGATACATCCGACAGTTTGTCCGTGGAAGCAAGCGACGT
ATTGGTGTGGGTTGTGGTCATCTTCAATGTTTCCGCTGAAGTGTGGTCCA
CGGGCTGGGCATTTGTCTGGGCATTCGAAGGTGGTTGCTGGTTCCCATGG
TTGTGTGGTGACACATTCGTCTTTTCGGTTGTATAAACATTGGTTACATG
GTTCGCTGAATTCCAAGGACAATGGCCAGCAAGCTTGACAGTAAGCTAAT
CCGTTGGAGCATTGGAGGAAGTAGTGTGGGTTGTATCGGCTGTAGTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAGATG
AATTAAATATTTAGATGAATTATACCATTAAATTTAGAAAATATCAACCT
TGGAAATTCAGTTATGTGAGAAATTAATTAATAAATTAAGGATGGTTGCT
CTTAAAAATCAATACTTCTATACAGCGAATTTCTTTTCTTGAAGTAGTTA
GAAGTACTTACCAGCCAAGAAAGCGGTGAAAATGATGACCTTCATGTTTG
TTTGTTCTTCTGAGATTACTTTAAGATCTGAGATGATGATTTTCACCACC
TTTCTACGTCTATTTATTCGAAAATCTTTGAAAAGTGTTATGAAATATTC
AATTTCCTTTATCAATAAACAAATATTAGGTTATTAGTTTTCAGCCGATT
ATCTGTCGTTACATGGGAAGAAGTCTAATCGCAACTGCCTTTGTTTGTTG
ATTAAAATTAGTTTTTTATTGGATTATGTAACTGCCTCAAAAATATTTCT
GCTTCCTGATCAGGAAATGCCTCTTATCTTGATGTAGAAACTATTTTCAT
ATACAGTCTGTCTCAAAATAATCAGCAACGGAAACATAAAGATGGTAACC
GTTTTATGAATCGATAAGATAGTAAGGAGTACTAACTGTATTGTGTAAGG
GTTGCAAAGAGATGTAGACTCCAACTTAAATCGCAAGTTGCTAGCAAAAT
AAGAGACACTCTGAAAAATCTCTAAGCTTAAGAGACAGTGTCGTAAGCCT
TAATGCCCCAAACACACCACACAAACAACACAGGTGGCACAACACCTGCG
CTCCGCTCTTTTCTTTCCTTCTAGTTCTTCTAGTGATAAAATAGTTGTCG
AATGATCATTTTTATTCCAATCGTCTGCTCGAAATCAAAACATAACAAAA
TAAAAATCTTCAAAGATGACTTTTTGGTTCTTGGCCAGTTTTGATTTGTT
TTCTTGACAAATTTGACAAATTTGATTACCTCCGTACGTCTTTATCATTG
AACATGAAATTGGTTTTACAAGGTTAGTTTAGTTCACTAAAACAGCACTA
CTCTAACCCGTGCGACTTCCAAAAACTTCTCATTTATTGACCTTATTTGA
TACTTGATACTTACTTTTAAAAGTCAAGGAAGATGGAGACCTTTTCTGTC
ACCGGTCGAACTAAATTTCTTTACGTTTAACAACAAAATAAACATTAAAA
ACCGAAGAACAACGGTTTAGATGCATACCTGCTCGGTAATTTGNTTGATT
AACAACAAAATAAACATTAAAAACCGAAGAGCAACGGTTTAGATGCATAC
CTGCTCGGTAATTTGATCAATTTCTAGGTCCGTGTTTCGGCTTCCGGCAA
CTATTTTGCCGTTCACTCCTAGGGTACAATTTTAAAACGGCATTTTTTGC
AGTCCTAGCTACCAGACTGAGAAAGATTTTGTGACTTCAAGCAAAACTAT
TCAAGGTCATTTCAACAAAATCGCCGTTTTGAAGATGTGATTTAGATAAA
AAAAATTTCACTTTGGGATAGAAGTTAGAGGTAAATGCACACAATGTAGC
AAAACTTCGCTCATAAATTCTCTTCGCAAAAATACTATCAAATAGAAAAG
CTGCAATGCTGTCAGCTAAAAGATGAAATTTCGCTCAAAATCAAAATGTT
TCAATTTAATATATTGTCAATACCTAACCCCCCCGACTATTTTAGTCAGC
AACAGAGAATCATAACATGTCTATTATTTCGACTCCATTGAAGTAAACAT
TACCAAAATTAATAGTTTTGTCTAATTACTGTTATACATTTGGGAATCTA
TTAGAAGATTTCTTTTGAAGGGAACTCATTTCAATTACATCCGAAGGTTT
CTTGGGAATTCGTCAGTAGCATTCTGGTGCGGTCTCCTAGACCTTAATAC
GGTAATATTTGCTCTTCATCTTTGATTCTTTCTACTTACAGTGATTAGAT
TGACACATGCACCATAAAATTTCTGTACTTGGTCGCGTCAGAGGTTTGTA
TACTCTTCGAAAACTCGGCCTATGATACTCAGGGTAGGGACGGGTGCTGT
TGCGAATAAGCTCCAAAATTCAAGTGTCCTTTTCCAGTGAAAATGAGAAT
TCTGTGTAGCTAAGCTTATTTTCCAATTTGGCTGTGGATCCAATCGGGTC
CATAAATAAATTATCAATTTTTCGAAAACAAAAGTGATTTTAACCAAACG
AGAAGGGTATGAAAATGAGAATTTCCACCGTCGATGCAAACCATGGTTGC
ATCTTCTTAGTCACTATTCTGTGCCATTTTTTCTTTAAACCTAGGTTTTA
GCCTCCTAAATTTATAGCTTTCTCACTGAGCAGACTCTGAAAAAACACAC
TTTAACATTAACCAGGTTGAGTAAGCCTTATGAACGTTTCAGAGTTGATA
GAATTTGGTAATGACATACTGCCCCTCAATAAAACCCCTCTTTTCCAAAA
CTTCGCTACATCTCTGTCACACAGTGTAAGAATGAATTCATTAAACCAAA
CTAAACCACTAAATCAAAGGATACTGCAAACTGATGGAAAAAGTATTTAA
GGTTTTTCTCACCCCAGTGAAAATTAACGTGCTCGGGTAAGTTATGGCAT
GTCTTAAAATTACCATAATTTTTAGATCGCATTAGTCGACAGAAAATGAC
CAAACAAATGACTGAACATGAAGGGTACTATGATCTAGTTTCTAACCTGA
TGTGTAACCTAATTGTTTTTTCGCTGATTTTCGCGAAGAAGCGCAAAAAC
TGATTATTACGTAATAATCGATGACGTCATCAAAACTAAAAATTGAATTT
CCCAAGAATCGTTTATCCAATTGTTTTCAACCTTTCACCAAATATGTATC
TTACTAAAGTCGATCATTTGAAGAAAAAATTTTTCGAAATTTTGATGACG
TCAGCAGAAAATAGGATTTTTCGTTTTTCACTAATTTCTGCTGACGTCAT
CAAAATTTAGAAATTTTTTTTTTCAAATGATCGCCTTAGTAGTAAGTAAT
AGTACCCTTCATGTTCAGTCAATTGTTTAGTCATTTTCTGTCGACTAATA
AGATCTAAAAATTATGATAATTTTCAGTTTTTGAGATATTCCATGTTCCA
TAACTTACCCGAATGATTATTACCACCCCACATAATGTTTTAAAGAATAA
TTTGCGCCCTATTGAATTTAGGATTTTTTTTAAATTCCCACTCCACTGGG
TGCTCAATGCCCACCAGGGCATAAAAAGTATCTTGCGCCGTAGTGAATTT
CAGATTTTTAAGCAGGTCCGGCGAAACCGGGGGGACTGGGGAGACTCCAG
CCTCCCCACTTTTAAACAAACGAAGTTTTTTCAAATTCCTAGCGAATTTG
ATCAGTCAAGGTCCCACTCCACTGAATGCTCAAGACTGAGCACGGAGACA
GGAATATTTTAAATTAGAGAAATTATAGTTATAGGGTAACATTTCGGAAA
GTAGAAAAAAATGACGCAGCGCTTCAGAGAATGTATATCAGGTAGAGTTG
CCTCAAAAAATAATAAAAATTATTCAACTTTACGCCTTACTTTGTAAACG
AAAAAATTACAGCAGAGAGGAAGGAATATTCTTCAGGCGGATGCTTATGT
CATAAGAGGTAATTCTAAACAACTATTAGAAGGAATTTATACATTTAGAA
TATTTCCAATTAACGCCAGATAATTGGTTGACAAACTAATTACTCGAGAT
TTGTTTAATTGATAAAGGAGATTGAATATTTCATAACACTTTTTAAAGAT
TTTCGTATAAATGGACGTGAAAAGGTGGTGAAAATCATCATCTCAGATCT
TAAGTAATCTCCGAAGAACAAACAAACATGAAGGTCATCATTTTCACCGC
TTTCTTGGCTGGTAAGTACTTCTTGCAACCCTATTTAAGAAAATNATTTT
CACCGCTTTCTTAGCTGGTAAGTACTTCTTGCAGCCCTTTTTAAGAAAAT
AATGTCGTTGTGTAAAAGTATTGATTTTCAGAAGCATCCCTATACGAATA
AATTTTTTCACAGCTTACTATTCAAGGTTTAATAATTTATCAAAATTTAA
TGGTATTAAATGTATCTAAACGTTCAATTATCTAAATCTTTCAGTTGCCG
CAGCCCTCGAGGTTGGAACCCAAACTGGTACCACACCACCAGCTGTCCCA
TGCCCAGACTCCCTATGTAAAGGAAGAGCTGATGGAAACTACGAATACTA
CTACTACAGCCGATACAACCCACACTACTTCCTCCAATGCTCCAACGGAT
TAGCTTACTGTCAAGCTTGCNTCCCTCTGCAAAGGAAGAGCTGACGGAAA
CTACGAATACTACTACTACAGCCGATACAACCCACAGTACTTCCTCTAAT
GCTCCAACGGAATAGCTTACTGTGAAGCTCGCTGGCCATTATTGTCCATG
GAATTCAGTGAGCCATGCAACCAATGTTTGTACAACCGAAAAGACGAATG
TGTCACCACACAGCCATGGGAACCAGCAACCACCTTCGAATGTCCAGACA
AATGCCCAGCCCGTGGACCACACTTCAGTGGAAACATTAAAGACGACCAC
AACCCACATCAATACGTTGCTTGCTTCCACGGACAAACTGTTGGATGCAT
CGCTTGCCCAAAAGGATTACAATTCAACGAGAAATGGAACGCCTGTCTGT
ACCAAGGAAAATACAAGACCGAACCAGAATCCCCACCAAAACACTAAATT
GTTTTCAGTTTTTTTAAGTAAAAGCGAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002695TCONS_00002695Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002695-proteinTCONS_00002695-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:484074..493054 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.09	0.22	0.23	0.86	0.75	0	0	0.1	0.1	0.41	0	6.16	16.32	288.46	59.8	4.65	0.23	0.32	0.21	0	0.13	0	0	0.31	0.07	0	0	0	0