XLOC_001445 (gene) - C. hemisphaerica

Overview
NameXLOC_001445
Unique NameXLOC_001445
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:264065..271818-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001445 ID=XLOC_001445|Name=XLOC_001445|organism=Clytia hemisphaerica|type=gene|length=7754bp|location=Sequence derived from alignment at sc0000021:264065..271818- (Clytia hemisphaerica)
GCAAAAAATAAGAAAAAAACAAAAAATATCAAAATATGTTTGAAGGGAAA AACATACACTTATCACCGATCGATGGCAAACCATTATGCAGTTTCAGCAA GAAGCTTTGTCGACAAAGACGTCTTCATAATTACGCGTTTTGTATACGGC ATATTTTGGAAGATACTGATTCACCTTTCAAACAATGTCCTTATCAAACG AAGTCAGGAGATATTTGTATCAACGCTGTACCTGTTGCTGCTGCAAGAGA GTATGTCTATTTTGCTATTCATTTGATCTTTATACGCCTGACAGTGCCAG TATTGATTTTTTTTTGTTATTACAGTGAAGTCTCTATAACTCGAACACGC ACGGGGAAAACAAATCTTTTTCGAATTATGGAGTAAGGCTTATAAGGCAT TGTTAACTGAAGTGACCAAACCTGTAAAACCTGTTCGAGTTAAAGAGACA TTAGAGTATGGGTTCGAATTAAAGAGGTTCCACAGTATAAGAACTTTGCC TAAAGAAGGTCACCCTTGCGTTTGATAATTCGGGAATTTTAGATTTCGTA GCAATACTTTATTGATTGTTCTCTTTTGATATTCATCTATTTAGATATTG CAATAAGCATATGCTCATAATGGGGCTACAACCAAAGACTACCAAAACTC AAATAGACAAGAAACCTGTTACTACTACAGTTAAGAAAGCATGTTCCAAG ACTATCAAGAGTAAAATCTCCACAAATAGCAGTAAAAAAGTGATGCATTT GATGGAAACACTTCAAAAAGAAGATGCAACGAAAAGTACGCATGCGCGTA AAAGACAAAAATCATATGACCGTTATTTGTCAATGTCGGTGATGAGGCGT CATATTTGGAGCAAACAACCTCGCTCTGACGTCATGAAAGAATTGATTGA AAACAAGAAGTATTTTAGAAAGACAAAGAAGAAGAAGATGCTGACTAGCT ACAGTAAGAACTTGTATTCGGTAAACTGATACTTGCTATTGTTTTACTCT AGATTGATATTATTTATTCCACAATATTGTTTTTATGCCTTCGGCTATTG TCGGCTAAGGATCCTTATATACGCTAGAGGTGACCTCTCAGAGTTGAATC TTTTCAATGTGTTTTATTGGTTTTGGGAGTATGTATTTGTTTGCACGCGT AATTCATCGATAAAGCCGTGCTTGTGTACTTCATAACGATAAAGGTTGGA AAAGGAACGCAGTGGTTGGTTAACTATTAAGTGCCACTGAACTCATGTGA GGTCCGCTCGAAATTTCGGTTCTGCACCTGTGCCGGTAAGTCTTGAGCCT AGGAGCGCTGCGCTGCGACGGCATTTTCTTAGTAAAGGTGATGATAATTT AATGGGTTAATGTTATTTTTGAAAAGTCTTTTTTCTCTTTTCATTTCAGC CCTGGGAACATCCGAAGATGAAAGTGACAGCTTCATTGAATCATTTCAAC AACAATGTGATGACAATGGCAGGTAATAAACTCTCTCTAGAAGCCCTGCA ATGTATTTCTTTTACTATGGTAAAGTTTCATATGAAAATTATTAATCGAG CAATCTTTCGCAGAACTCGAATTTACGAGAAACTCTGGGATTTCGTCCTA ATGTCCATGTGTTGTGGGGAAAGCAACGAAACTTTTAATGTGTAAGATAA TCGAAGATTCCAGGTCAATCGTATTGCTAATTTTTTATCGATTTGCTTTA CAATTTTTTCTGCAAACAGACAAAATATTCCTCTGAGTCTCTGTTACTCT AATCCTTAGTTCAACAACACACAATAGCTTTATTTTCATTTTCAATTTGA CAAATAAGATCTTTAAAAATGATGTTGACAAAATAATGATCTTCTTATCT CCTCTGGTCACGTTTTTCAGTCATAATTCATCAGCTGAGAAGTTATTGAC TCAACTGAAACACCAACATGTTCAACTACAAAACATTGTCAAAGAAAAAA TGAAAAGTACTTCACTCTCGTATTCAGTGCTCTCAACTCTGGTTACAGCA AGTCGTGAGAATGTTACAGAAACGGCAAACATTCTTACTAACGGTAACTC GAAAAACAAAGTTTATCAGTAAGTATATTATAAAGTGTAGTTAATGGAAA AATATACCGTATTTCCTCACAATACACGCTTTTTTTATAAGAATAACTTC TATAAGAATATCAGGGTGAAATTTTAGAGTTAGAACAATAGGTCTATTGT TTAGAACAATAGAAAAATAAGAATAATGCTCACCCGCAGCCAAAGTACAC TATTCTTATTTAAAAAAAGCGTGTAAGCGCCGCAGCACCTATTTTTTTCT TGTGGTTTTAGGTGGGGCACTTGATAGAGGGAGACGCTTAATTCGAATTT GAGTTTCATCTATTTCTATGAATTTGATCGATTCATGGGTTAATATCCTT ATATTAGAGAAGTTTTTCTCACTATAAAATCCAGGGACCCTAACAGGAGT TACTGACGTATGACTAAAATCGGCGGATCTGTGATCATTTTTCTTGATTT TCTAATAAACTCCTTATGCAATAAAAATAAGAACAATAGCCCTTCATCCA AATTTAATGATTCTTATGAAAAAGAGAGTAGAGACAAAATGCTATTATCA TTTTTGTGTTCACATCTCAACATCCGGTCGGAATTTACTTCATAACTCGA ACGTCAACGCTCTTCAATCATCAATCGATTGATCTTTTTTGAATTTTTTG ATAATATAATGTGAGTTTTATGAAAACATTGTTAACCCTCACTTAGTATT ATGCCATTTTACATATTACCATTTTACCAAAGATTTCCAAAATGGTACTT GATGCCTCTCTGCTTGAGGCTCAGCAATTAAGAGAAGGATCAAGGGTAAA TGGAGCAATCCAGGGGAAAAGAGTGGCCCCCTCCCCTACCTTCGGGTAGA TAGCTATCGAAAGAGGAGCCTTCGGGTCGCCTCTGACTGCGGTTGCAGAC TTACCTACTTATTATGCCATTTTACACTTATTTCTTTACTCGTACTCCCA GCCAAAAAGAAGAATCAATTACTACAAANTTAGCTTTATTTTCATTTTCA ATTTGACAAATAAGATCTTGAAAAATGATGTTGACAAAATAATGATATTC TTATCTCCTCTGGTCACGTTTTTCAGTCATAATTCATCAGCTGAGAAGTT ATTGACTCAACTGAAACACCAACATGTTCAACTACAAAACATTGTCAAAG AAAAAATGAAAAGTACTTCACTCTCGTATTCAGTGCTCTCAACTCTGGTT ACAGCAAGTCGTGAGAATGTTACAGAAACGGCAAACATTCTTACTAACGG TAACTCGAAAAACAAAGTTTATCAGTAAGTATATTATAAAGTGTAGTTAA TGGAAAAATATACCGTATTTCCTCACAATACACGCTTTTTTTATAAGAAT AACTTCTATAAGAATATCAGGGTGAAATTTTAGAGTTAGAACAATAGGTC TATTGTTTAGAACAATAGAAAAATAAGAATAATGCTCACCCGCAGCCAAA GTACACTATTCTTATTTAAAAAAAGCGTGTAAGCGCCGCAGCACCTATTT TTTTCTTGTGGTTTTAGGTGGGGCACTTGATAGAGGGAGACGCTTAATTC GAATTTGAGTTTCATCTATTTCTATGAATTTGATCGATTCATGGGTTAAT ATCCTTATATTAGAGAAGTTTTTCTCACTATAAAATCCAGGGACCCTAAC AGGAGTTACTGACGTATGACTAAAATCGGCGGATCTGTGATCATTTTTCT TGATTTTCTAATAAACTCCTTATGCAACAAAAAAAAGAACAATAGCCCTT CATCCAAATTTAATGATTCTTATGAAAAAGAGAGTAGAGACAAAATGCTA TTATCATTTTTGTGTTCACATCGATCTCAACATCCGGTCGGAATTTACTT CATAACTCGAACGTCAACGTTCTTCAATCATCAATCGAATCTTTTTTGAA TTTTTTGATAATATAATGTGAGTTTTATGAAAACATTGTTAACCCTCACT TAGTATTATGCCATTTTACATATTACCATTTTACCAAAGATTTCCAAAAT GGTACTTGATGCCTCTCTGCTTGAGGCTCAGCAATTAAGAGAAGGATCAA GGGTAAATGGAGCAATCCAGGGGAAAAGAGTGGCGCCCTCCCCTACCTTC GGGTAGATAGCTATCGAAAGAGGAGCCTTCGGGTCGCCCCTGGCTGCGGT TGCAGACTTACCTACTTATTATGCCATTTTACACTTATTTCTTTACTCGT ACTCCCAGCCAAAAAGAAGAATCAATTACTACAAAAATTCCATGCTGTAT GGTTACTGGTAGTACGCGTTGCTCACAAATGGCTCTACCGTTTTCTAGAT ATTGTCGTAACCGTATCCTTTTCACTTGTGATTTGTAACCCTTTGAGATT TTTGGGCTGTGTCTCTTCTATCTGAGCAACTTTTTATAAAGTCAAGATAT TCAAATTTTTCAATTAAAGCAAGTAAAACAATTAGAATTTAAACGTAAAA TTGTATTATAAAACAGCCTTAAAGGTTTTGTTTTTACATAAGTGTTCTCG TTTCATATCAGACACATATTTCATGTCGGGACAGTGTCTGCCTATTGTTT TATTATGCTTATATAAGCAAAAAATGTTTTTCTTTTCCTCTTTTTGACCA ATCTTGCTCCACATCCGTGTCAATCTAATGTGAAAAAGCTTGTGAATTAA AATTGATGAGTAAGCAAACGATATCACTCGTATTTAAAAACAAAATCTAT AATTTAAATTTGAATTTTGAATTTAAAGCATCTTCTCATGTAATCTAAAG AGTCTGATAATGGAATCTCAGTGAAACAACATCATGACTTTTCCTTGACA ATATTATCACCACTACTACCACAACCAGATATAAACGAAGATACTGACCA ATTGCTTTTCGTTCCGAAGAACATTGCATCATTGCAACGAAGTGATATGC CCGGCCTTAAGATCTTCAGACCTGACCTCTTGACAAAGGTATTATTTTCT AGCAGTGCTTTTTTAAACATTAACTCTTGTTCACACTTAAGGCTACCATT CTCTTTTAAACCAAAGATTCGAAACTGAATCGTTTCCACAAGTTTCATAA ATTCAAAACTGGTGACAAACGCCCGATGCTTTTCGGGTGTTTCTGCAAAA AAAGATAACCTCATTAATATCAAGAATTGTTTTAGGTTTCTTTGCTTTGA TTGACATTGCTTATTCTATTTCTGCGTCATAGGGGCTAAAAGCGAGTTCT TCTCTCAAAGCGAAACGAAAAGTGTGTCGAAAAAGCAACCGGAAAAGAAA AGGAGCTCAAAAGAAAACACCGAAGAAACCAAGCAAACCCAAAACCATAG CTATCCAAGCTTCTTCGCAATCGAGTCAAGAAACAACCTCGGAGATTGAT TTATCTGACGTTCAACACCCGGATAACCTATCTATCGGAACACCACCCAT ATTGAGTGAATCAAGTAGTAGCTACACTGAGAGCGATTCTGAGTCAGATA TTTTAACACCGGAAGAAGCATTCCGTCTACCGCCCGGTAGTCTGTCCTAT CCGCCTGGTTTGGACGATGAAGACTCCCTTACTGGGATGCATCACACAGC CCGGGCATGCAATATAGCAGACGAGGAGGATGAGTTAATGAGATGCGGAT CCAACTTCTCAATGGATAACGAAAAACAAGACATGATAACACGTGAATTA TCTTCACCCACATTGAATCAGTTCTCGGAATTCGACCAATCACTGTTCGG TGCTGCCACCGCTTTTTCACCAACATCCGGCAGTGACGTCACATTACCTC ATACGTCATCTTTGACTTCACCAAACCAAGAAATAACACCCTTGTCAGCC TCTTTTGGAACCAATCCAAAATATTCTTCAAAGAATCCATCACCCTTAAA AAATCATACAAATTCTCACACAGGGCACGGTTCAGTCACGACTCTCAAAA TCACACCCTTAAACATGTCACCTCGTAAAGCACCGTCTAAACTCAACGTT AGACCACCACTTTTGACATCACAATCCATGGTCAAACCTCCCTTAGTTAG CAATACTTTCACACAAAGCTCGTCAACTAAAGATGAATCTTGGAATAAAC AATATATGCAGATTGATAATTTTGGCGATCCAGATCTTTTGAATGACATT GCCATGGATGATGAAGAAACTCCATTAGAGAAAGTCAATCCTGATATTTT CTTTTCATCAGCTTTTCCAGTTACTACCACCGCATCTAATGATTAGTATG TTATTTTCCAGAAATACATTAGAACCCTGTGTGACAGCCCCGGTGAAACT CTTTCTTACATCGGGGATAAAAATTTCGATCGAAATCTCAATGGGCTTTT CCAGAAAAAAATTTGAAGGAGGTCATAACATTTTTTGGAAATTTACCCCC CGGACAAGGCAGGTTTTATAGATTTTTCACTACCCCCGNAAATTAGAAAT AGAAGTTTTATTGTTCCATGTTAAAAAAATTCACTTTTCACATTTTAAAA GGGGATGAAATGAATGTCAGAAGTCTCACCGGGTCTGTGATTTGGATTCA GTAACATACGTACACAAGAATGTTTTTTGCCTAGGAACAACAGCAAAATG AATAAATATTGACTTGCGTATTTTCGAAGGTAGAACTACTACGGTACCAC ATATATCTACTTTCATGCAAAAACATTGTAATGATGTGAAAATACTTATC ATATTGCCTGCTGAAGTCAAGTCAAGACTTGAGAAATGATTCAGCTCGTA CATTATACTTTGATTTTACTTCGAGTAACTTAACTTTGTCAATTGACGCT GAATGAGGAATGCCAGTAGGTTTCGAATTTGTAAGATTTTCTGCTAGAAG AAGTAAGTTTATATTATCCTCTTTTTTGGTAAAGTTATGAAATGCCTAAA ATAAATGACCTAATATTAAAAAAAATCAACATTTTTCAAAATTAAAGTGT TTGTGTATGACATAAGCGGAAGTAAATTGGGTACATTGATTTCTACATAT TTTGCATTGGTTTTAATTCGATATTAATTTTGATTTGAGATACATCCTGT ACACAACCAACACGTTTTCTAGAACCTTTCTTTTTCTTAAACGACCGGTC TCGATCATTAACTGGTTTATCCGACAAACATAATAATCGAGCAAAAGCCG CCCTATACCTCCCACTCGTCAATGCGTAAACGGGCGGATTAACCGCTGGG TTAGCGTAAGCTAACATTAAGGAAACTTTTATAGCGACTAATGGTACGAT CGGTTCATCGCTTAACGTATCGACGACGTCAATGGTAGCTATCGGCATCA GGAGAACCGTGAACAGGAAAACAATGATACAAACACCTTTAGCGAGTTTC ACTTCACGAGTTATTGTTTTCACTAAATGTACACCACGGGATTCCTTACG TGATCCGTTCCCGTTCCCGTTACGAGTTGTCGGAGACCGATCGTTGAGTT GAGTCTCAGATCGTAAGCGACTGTTCCGAGAGCTGTAAAGTCGTTGTAGA ATAACCACATACATTATAAACATCAGTAAACATAGCGTGAAAAATGATCC GAATTCGATGAACAGTACATAGCTAGGACATAAAACAGTCGAGAAGGTAC AAACATGTATTCGATCGCTACCCAAACTGTCTTTGTCACCGATGATGATA AATGGAAATGTCGCAATCACCAGAGCATACAACCATGATAAAATAACAGC TATCAAAAGTTTACGTTTAGTCATCAAGCCTCTATACCGTAACGGAAATG TGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002670TCONS_00002670Clytia hemisphaericatranscript
TCONS_00002669TCONS_00002669Clytia hemisphaericatranscript
TCONS_00002668TCONS_00002668Clytia hemisphaericatranscript
TCONS_00002667TCONS_00002667Clytia hemisphaericatranscript
TCONS_00002666TCONS_00002666Clytia hemisphaericatranscript
TCONS_00002665TCONS_00002665Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002668-proteinTCONS_00002668-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:264065..271818 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.69 4.49 2.69 2.34 1.67 1.3 2.7 3.56 2.04 2.05 3.19 2.94 2.83 2.76 2.05 2.93 2.31 2.68 1.25 1.01 1.68 1.61 5.16 4.41 4.95 4.96 1.26 0.78 2.87 2.88