XLOC_001410 (gene) - C. hemisphaerica

Overview
NameXLOC_001410
Unique NameXLOC_001410
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000021:24130..29675+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001410 ID=XLOC_001410|Name=XLOC_001410|organism=Clytia hemisphaerica|type=gene|length=5546bp|location=Sequence derived from alignment at sc0000021:24130..29675+ (Clytia hemisphaerica)
ACCTATACCCGCAACAtgtctctaatcttaattttaataaaacgaGCCTC TAAGTATTCAATCAAATTGGTAACATAATCTGTCAGTTATCTATCATGTT CACAATTAAGAATTTTGGCTGTTTGGGAACACAATATTTTTTATACCCTA AaggtttttcattcaaaaaaatattcttttcttaGGACATACAACAAGTT AAAGTTCAAGTACAATACAAAATGTGTGGCATTTTCTGCAAAATCTGCAA AAGGCTTGAAGTCAAAACAAAGCCTATTGATGATAATATCATACCTCTTA TTCAAAATCGTGGTCCAGATAGTTGTCAATCATTGACACGCATTGTCAAG GTTGGATCAGATGAATTGGAACTAACATTTTGTAGTACAGTTCTACACTT ACGAGGAGAGAGTGTTACCAAACAACCATTAATAAATTCAAATGGTGATG TTTTGTTGTGGAATGGTGAGATATTTGGTGGACTTGATGTTGGACTACAT GAAAATGATACTGAAATCCTCATGCGACATTTGACCGCAATCTCTCAAGA AATGCTTGAAAATGTTGAACCAGCTGAAAAGAATATGGCTGATTTGTTTA CAAAGATACAAGGTCCGTGGGCTTTtgtattttatcaaaaatcactgAAT AAACTCTGGTATGGTAGAGATTATTTTGGTAGAAGAAGTCTTATACAATC TTCTATTGATGGTAATTTCCTGCTAACATCAGCTATTTGTGGAGATTTTA GAGAAGAAAGTGAGGAAATCAAAGCTAAGAGTATTTATTGTTTGAATCTT GTTGATTTGAAAATTGATGATTTGTCATTGCCAGCTTTTAAAGAAGCAGC AAAAccgtttgaaataaaaatactgCCTCCAAAACCCAACAAGCACTCTC TTCTTGGATCTATACATAGATGTACAATTAATTACCCTCCAAgcgaaaat aaaatttcagaGGGGTTAGAACATTTGGCAAATATCACTTGCTTTGAGAA CGACTCAACGATAGATTTAGCTGACTGTGTTGGGAATCTTTCAATCAATG ACAGTTCTATAGAAAAAATACAGGAAcaatttttacaagttcttaGTGAC TCAGTTCGAACTCGAGTTGAAACCATCCCTCGACCACTTTTGCAAGATGG TAATCCAGAAACAAGTCTTGGAATCCTTTTTTCAGGAGGGATTGACTCTG TAGTTTTGGCAGCTCTTGCTCATAGACATGTTCCCCCAAATGAAAGTATT GATCTTATCAATGTCGCTtttgaagagaaaaagaaaatacctcaaaatat gaaaaagaagtATGCTAATAAACCTGGTAATGATAATACTGATGTTAAAA GTTTTAATGTTCCTGATCGATTGACAGGAAAAGAAGCTGTTAAGGAACTG CCAGAGGATCGACAATGGAATTTCATTGAAGTAGACGTCACTTTAGAGGA ACTACAAGCTGAAAGAAAATCTCGCATAAATGATCTTGTATGTCCCTTAA ATACTGTTCTTGACGATAGCATTGGTTGTGCCATCTGGTTCGCTGCTAGA GGTATGGGAAAGAGGTATGGTTTGAATGATGAAAATGAGCTGGAACTTGT AGATGAATGTTacaaatcgaaagtgaaagtattATTTACAGGAATGGGTG CGGACGAACAGCTTGGTGGGTACGCTAGACACCGCACAAAGTATGAGCAT GGCGGTTGGACTGCATTACGTAACGAAATGAAAATGGAAGTGGATAGAAT TTCTTCTCGTAATTTAGGTCGAGATGATAGATGCATTTCAGATCATGGGC GTGAAACTCGTTTTCCatttttggatgaaaatgtTGTTAGGTTTTTGGAT TCACTTCCGGTTTGTGTTAAAAGTGATCCAAGATTGGAACGAGGTTATGG GGAGAAAATTCTTTTACGTGAAGTGGCTGAACATCATTTAAAGTTGAATT TCGCTAGTCGATTACCTAAACGTGCAATTCAATTTGGTTCGCGTATTGCT AAGCTGGAAAGTGGgaaagaaaaaggaagtgaAAAGTGTGAACGTTTGAA ATAACAATCACGATCTCTAAATTTATCTTACATTTTAACCATTTGTaaat cattttataatttttatactttatttttgaatttatcaAAGAATCAAAAG TGACCGTCTCGTATGTcttgaaatttcttgaaattgttGCAATTATGTGT TTTCTCTCTTGAAAAACCTTCTTTAAataaacaaacatcaatttcTATAT TCTTATGTCTTCACCAGAAAATACGTACtagaaaaatgagtaaaaactAT AACAACAAAATTCAAATCCAATTCAAGAGAGGTGGACTTGAATCAAATTT ATCACCCTTTCAACGAACTGTTGGATCAACTGAGAGTTCATTACCCAAAT TCCACACAGACGAaagtgaaaagaaatatttacaatcaGCCCCCACAGCA CCTGTTGAGGATGACGACCTTTACGATCCTTTCAACCCTTCTGATGAAGC GGAGCCAGAACCAGAACCGGTTGAAGCGCcacctaaaaagaaaaagaaac gaaAATCGTAATTAAACCTTTTCTATTAAACTCTCTATCGCAGTTAATTT TATTCAAACGTTTCTTCAACACCTAATCATGTTATTGATTCTCAAAGTCC ATAAAGAGATTATTGGTTGCAACTGCAATGAAATATCTGTAGTACTTACG AAATTGTGATTCTTGATTTTTAATGCTACCATTTTTAACCCCCTAATCAA CTGAAGTTCTTCATTCAAAACTGATAATGATATATGTGAAGAAGTAAGAA TTTCTGTAGAACTATGTTCACTATGGACGAAATGCATACACCTGCTATGC CACCCAAAGTGACTCCTGAGTGAATAAAGTTgggcaaaaattttcatttc ttcgTGTATGTATTCTTGATTTATTTATGAATTTCCTGACTCATGGTATG TTAAAAGTATACTGTATAAACAAAATTAATATTCCACATTTTTCACTGAC AGACGATGGGACATGGATGACGAAGCCTCTGACAAATCAATTGTTGAAGA TTTATTGAAGAAATCCACAGTGGACGATCAGATCTCCTCTGTGGTCGCCA AACAAGAAGCCGCAAGACAAGATGAAATGAGCGATGAAGATGAACTAGAT AAATTCATGGCTGGAATTGAGGTTCGTGATATTTATTTTATGTatgctac gtcatatcttccttcgtttcgagcgtaaaactcctactcttcgggatatg agcactgctcttgttttgaatattgagaTTCACCGGATAAATCACATGCG CAccgaggttttaatgaaacaataaagAGTTTCGAAatctaagccaatca gctgtgtatTAAACATtcttatttgaaatctctattgataaacatctttt gtgaaagttgtatattatatttaaacctattaataaggaATCCCCGATGG GGTCACTaatggccgcctatagcagtgcctatagaccaagagtaaggctt aaaagcctggagctgtctattttGTAGATTAtattttctgttgttctatc gaAACCATAGAcaatgttatcgtccgttacatcGATAGTAAAGCCGGGAA AATATTATGCGCGTGGAgtttacggaaaaaaatcggcgggagagtttcga agaaaaaggaaaactaccggctgtaaactctttttCGGCAAAAATCCGTT TACGAATTTTCTTCTGCTTTgcgcttatttcttagatagtgatttttCTT CGACTATAGCATAGTATCGAAACCATTGTTGAGGACTTCTCTGGACTTTC CCATTCATCGTTGTCTAAACTTTCGATACAAGTGACGACCAACCTGGACC AACGACAATTTGATGTTTAAAGGACTTTTGAAGttttacaaatctttttt tgccaaaatacaTTGTACTGATGAAATTGAATTCAACTAAACTGATATTA NCGATGAAGATGAACTAGATAAATTCATGGCTGGAATTGAGGTTCGTGAT ATTTATTTTATGTatgctacgtcatatcttccttcgtttcgagcgtaaaa ctcctactcttcgggatatgagcactgctcttgttttgaatattgagaTT CACCGGATAAATCACATGCGCACCNTCCATTACTCGCTTATCctgatgat gaagaagaaatggAATATGATTCTGATGGAAACCCTATCCCTCCTGAACG ATCCAAAGTAAACCATATTATGCTCGTTTAACTCTTTTCTTCGTACTTAA TGTCAACGAACGTAACTCTTCTTTTGTAGAATATTTTGACTTTCTCAGTC TGCAtgtttccttttcttttttattagtTTGGTTTGGTTTCTAAAGGTTG TACAGATAGGCCTCTTAATAACTTTTTTGAACTCTTCTTTCTACTTTGGG AGGGCGTAATGGGATTTTAGTTATCTTGCTTGACCNTATGTTAAAAGTAT ACTGTATAAACAAAATTAATATTCCACATTTTTCACTGACAGACGATGGG ACATGGATGACGAAGCCTCTGACAAATCAATTGTTGAAGATTTATTGAAG AAATCCACAGTGGACGATCAGATCTCCTCTGTGGTCGCCAAACAAGAAGC CGCAAGACAAGATGAAATGAGCGATGAAGATGAACTAGATAAATTCATGG CTGGAATTGAGGTTCGTGATATTTATTTTATGTatgctacgtcatatctt ccttcgtttcgagcgtaaaactcctactcttcgggatatgagcactgctc ttgttttgaatattgagaTTCACCGGATAAATCACATGCGCAccgaggtt ttaatgaaacaataaagAGTTTCGAAatctaagccaatcagctgtgtatT AAACATtcttatttgaaatctctattgataaacatcttttgtgaaagttg tatattatatttaaacctattaataaggaATCCCCGATGGGGTCACTaat ggccgcctatagcagtgcctatagaccaagagtaaggcttaaaagcctgg agctgtctattttGTAGATTAtattttctgttgttctatcgaAACCATAG AcaatgttatcgtccgttacatcGATAGTAAAGCCGGGAAAATATTATGC GCGTGGAgtttacggaaaaaaatcggcgggagagtttcgaagaaaaagga aaactaccggctgtaaactctttttCGGCAAAAATCCGTTTACGAATTTT CTTCTGCTTTgcgcttatttcttagatagtgatttttCTTCGACTATAGC ATAGTATCGAAACCATTGTTGAGGACTTCTCTGGACTTTCCCATTCATCG TTGTCTAAACTTTCGATACAAGTGACGACCAACCTGGACCAACGACAATT TGATGTTTAAAGGACTTTTGAAGttttacaaatctttttttgccaaaata caTTGTACTGATGAAATTGAATTCAACTAAACTGatattatatatatatc atCAGTTATTATTTCTGTGTTTCtagaaaaatcatattttcatcTTTAGG AGACactggaaaaagaagaaactgacagaaaatccaagaaaaagta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002592TCONS_00002592Clytia hemisphaericatranscript
TCONS_00002593TCONS_00002593Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002592-proteinTCONS_00002592-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:24130..29675 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ASNSD1PREDICTED: asparagine synthetase domain-containing protein 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.46 29.09 17.63 13.67 30.53 22.55 20.3 22.2 11.64 14.01 11.4 7.74 9.03 8.67 9.99 13.63 16.21 16.32 6.07 5.25 10.53 9.38 28.19 26.02 13.18 13.3 8.54 6.95 18.61 18.57