XLOC_001354 (gene) - C. hemisphaerica

Overview
NameXLOC_001354
Unique NameXLOC_001354
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:998405..1002485-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001354 ID=XLOC_001354|Name=XLOC_001354|organism=Clytia hemisphaerica|type=gene|length=4081bp|location=Sequence derived from alignment at sc0000020:998405..1002485- (Clytia hemisphaerica)
NAGTTTTTCCAGCATAAAGCTGACAGTCTCAATTGTCTTTTCTATCTGCC
TCCATCATGACAAGCTCAACAGGTTATGGGCCCAGTGCGAACAATCTTTG
GCAGAACACTGCTTTCGATGGAGATGAAAGAAAATTTGAGCTGTGGGAGG
TGAAGTTCTTAGGATACATGAACATTCGTAAACTGAAACATGTTTTCCTT
TCTGAAGATGAAATTACAGCTGAGAAAAACGAATTAGCTTTCTCTGAACT
CATCCAATTCTTAGACGAACGTTCCATTTCACTTATTATGAGAGATGCAA
GAGACAATGGTAGACTTGCATTCAAAATCCTCAAGGAACACTATGCTGGT
TCAGGATAATAACTTTGTACACTCAGTTGACCTCTTTGATCAAACGAAAC
AATGAATCAATCACTGACTACATCTTACGAGCTGAGTCAGCTGCAAATGC
CCTACGTACCGCCAAGGAAACCGTGAGTGATGGCCTTCTTGTGGCCATGG
TTGTAAAAGGACTCCCAGATCAATACAAATCCTTTATAGCCGTTACTACC
CAATCAGAGGACGTAGTGCAAGATTTTCAAAAATTCAAACAAGCCCCCAA
GAACTTCGAGGATACAGAACAGACTCGTAACAAACGTCCTGACTCAACTG
AAGGTGATAATATCATGAAGACAGACTCCTATCGTACCAAGAAACTCCCA
TGCTTTAATTGTGGTGCTGCTGGCCACAAATCAACCGACTGTCGCAAACC
CAAAAAGCAAAACTACGACAAACCGTATTGCTCATATCATAAAACCAATT
CCCATTCGAACGAGACATGTCGCAAACAAAAACGACAACACATAGCTAAA
ACCGTTTTGGACGAATCAGAAGGACATTTTCATTTGTATTCACAGTTGAG
GATAGCAACAAACTGCTTTTAAAAACTTCATCAGACAAATTTCTAGTTGA
TTGTGGTGCAACCACCCACATTGTGAACACAGACTCAAACTTTATTGACA
TTGATACAACTTTCAAACCAGACCAACATTTCATCGAACATGCTGACGGT
TCCAGATCTAACAACCTAGCAAAGAAAAAAGGGACAGTGTCAATTTCTTT
GTTATCTTCCACTGGAAAAGTCGTTAATGCAAAATTAGACAATGTATTGT
ATGTACCTTCATTTCCACAATGCATTTTCTCAGTCCAAGCAGCAACAAAG
AAAGGAACAAAATTGAACTTTGAAGGTGATCATGCTGAACTTATTACCAA
TGATGGTACCACATTCCCGATCGAGCAACATGGTCGATTGTACTACCTCT
GTAAGACATTAATATCCGATACCAGAACTGAATCGCTCAAGACATGGCAC
AAACTTCTAGGTCATTGCAACCTTTCAGACGTCAAAAAGCTAGAAGGAGT
CGCCCAAGGTATGAACATTTCAGATAAAAGTGACTTTGATTGTGAAACAT
GTATTCTCGCCAAACAGACCAACACTCGTAACCGAGATGCTGACATCCGA
GCTACCAAACCCTTCGAATTAGTCCACACTGACCTTGCTGGTCCTGTCGA
TCCTGTAGCTAAAGATGGCCACCGCTATGCTATCATTTTTNCCAAACCCT
TCGAATTAGTCCACACTGACCTTGCTGGTCCTGTCGATCCTGTAGCTAAA
GATGGCCACCGCTATGCTATGATTTTCGTTGACGATTTTTCAGGATGCTC
GTTTACATACTTCCTGAAAAACAAGTCAGATGCATTGCAAGCAACCGAGA
AATTCTTAGCGGATACCAACCCATTTGGTAATGTTAAAACTTTCAACTTT
CATACTGAATTTCTACCCACAGGAGATACCGATCGTCTACGTAGTGGCAA
TGGGGGAGAGTATATATCAGCTGAATTCAAAGCACTTTTGTTAAAGTACA
ATATCAAACATGAATTGACATCGCCCTACTCGCCACACCAAAATGGGACA
GCAGAACGAAACTGGAGAACACTTTTCGAGATGGCACGATCTTTGTTAAT
CGAAGCCAACCTACCAAAGTCACTATGGACTTACGCTGTCCTAACCGCCA
CACATATTCGAAACCGTTGCTATGTGCAAAGATTGAAAACTACACCGTAC
AGCGTAATCACTGGAAGGAAACCCGACATCTCGAAGATGCATCTATTCGG
AAGTGTTTGCTACCCTCTCATCCATGACCCAAAGAAACTAGACCCTCGAT
GCAAAAAGGGTTATTTTGTTGGGTACGATCGTGACAGCCCATCATACCTC
GTCTATCACCCAGACAAACGTACTGTCATGAAATATCGACTCGTAAAGTT
CACCGATAAATTTGAAACTAAACCGGAATCAGATCTACTCTTGCCTCCAA
CTGAACCTGAGGAGCAAGAAGTTAAGACAGAGACAGAACCATTCAAGCCA
GTAGTCAGTCCAGAGCAACGTAAAAGCTATCCATTGAGGAGCCGTCAACA
ACCAATGAAAGATGAAGATGTGAAAGAGGACACTGATTCCATCAACCACA
TTGATTTTTGCTACCTGGTGAATGCCCCGCTTACTTACCAGGAAGCCATG
ACCAGCCCAGATTCGCAAAAATGGGCAGCCGCAATGGATGATGAAATTAA
ATTGATTATACCGAAACGTTCTCTCCGACAGCCCGCATGGAATCAGTCCG
TACCATAATGCAAATCGCCATACAGAACGATCTAGTACTCCATCTAATGG
ATGTCAAGAGTGCTTAACTTCACGCTCCAATCGATGAGGACGTATATGTT
ACTCCACCGAAAGGATATGAACCCGTCAATAAAGTGTGGAAGTTGAACAA
GTCGCTTTACGGATTAAAACAGAGCGGTCGTAATTGGCACACTCTTGTAC
ACGATTATCTCATTAACGAACTATCCTTCAAGCAATCATCAGCAGACCCA
TGCGTCTATTTTCAACAGGGTGGAACCGCCATCCTACTCGTTTGGGTAGA
CGACATTATTATCGCCACACGTACCGAGTCCCACATGGCACAACTGAAAT
CAAAATTCTCATCAAAATTTAAGATGAAAGACCTCGGACAACTATCTACC
TTCCTCGGTATTAACTTCAAACAGACAGAGGAATTCATCACCATGTCGCA
ATCACATTACCTTGAAGCTGTTTTAAAAACTTCTATGGGACTGTAAACCC
CGATCTACACCACGTGAGCAAAACCTCAAAGCTTACAATGATTCGAAATC
CGACGAGACCGACAACCAGAAGTACCGTAAAATGGTTGGAAGTCTAATTT
ACGCTATGACGTGCACAAGACCCGATATCGCTTTTGTCGTGACGAAATTA
TCTCGACATCTATCTTGCCCTGAATCATCAGATTGGGCAATGCTCAAACA
CGTCTTCCAATACATCAAAGGAACTGTTGATAAACATTTAACTTTCCGAA
AATCGCAGTTCAACCTTCGAATCCACGCATTCTGCGATGCTGATTGGGCG
TCTTCAACTGATGACCGTCGTAGCATCACTGGTTATCACATTAGCCTCAC
CGAACATGGTCCACCAATCAGTTGGAAATCCAAGAAGCAAACCTCCGTTG
CACTATCGACTTGTGAAGCCGAATACGTTTCGTTGTCAATCACATGTCAA
GAAACCATCTATCTTGCTCGTCTTCTAAATGAACTGACAGAGCACGATTT
ACAACCAACCATCATCAAGAACGACAATCAAGGAGCATTGTCATTGATTA
AGAACCCTGTTAAACATTCTAAATCGAAACACATTGATATTCGTTGCCAC
TTTATTCGAGAAGTCTATTCGAATGGAAATGTAGTTATTGATTATGTACC
ATCTGATGACAATGTTGCAGATGTCTTCACCAAACCACCAAAAAGACATC
TCCTAGTCAAATTCGGACAATTTCTTTTCGGACAGTAAACGAAAATGAAA
GTAATCCTAAAGAGGGAGTGTTGATATTTTTATTATGTTTTTAGCTTTTA
TTTGTCTTATTTGCTTTTTGTTCCGTATTTTATTATGTCATTTTCCATAA
TGGTAGATTAGCTACGCATAACGTTTTTACTATCGAATATACTAGTTTTT
CCAGCATAAAGCTGACAGTCTCAATTGTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002534TCONS_00002534Clytia hemisphaericatranscript
TCONS_00002533TCONS_00002533Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002534-proteinTCONS_00002534-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:998405..1002485 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.82	2.05	1.09	1	6.31	5.31	2.69	3.94	0.66	4.37	2.33	2.4	2.01	1.56	1.95	2.85	1.72	2.5	1.62	2.44	1.44	1.53	2.1	2.13	2.49	2.26	2.69	1.7	1.35	1.14