XLOC_001349 (gene) - C. hemisphaerica

Overview
NameXLOC_001349
Unique NameXLOC_001349
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:760645..769624-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001349 ID=XLOC_001349|Name=XLOC_001349|organism=Clytia hemisphaerica|type=gene|length=8980bp|location=Sequence derived from alignment at sc0000020:760645..769624- (Clytia hemisphaerica)
GTAATAGACAGGGTAAGTGATAATTATGTCACTCGTTAATTAAACTATTG
ATGGTACTGATCAAGGGTGATCTGGTGACTTGAATTTTCAAAAGAGTTCA
AATATTGAAGATTTAATATGCGGGCATTACAGAGCCAAACCTTGGGTAAG
ATTTCTTTTTTCTCATTTCGGATATAAAATGGAAAAATATTTTAAAAAGT
CTTGATATACGTATAATCTATATTCATCTTTGAGTCATATTTAGTTTTTG
ACAGGATAATCAACAAATTGCTTTGCAAAGTTTTGAAGAGAATTTTACTT
AAATTTCATTGATCTTTAAAACACTATTGTCTCAGTGACCCGACGAGAAT
CTTTTACACAGCTAAATACCAACAGGATGGAAAATGTCTTGTGTTGAGGT
TGACCAATATCATTATTCTACTTAAATTTAATTGGTCCTTAAAACACCCC
TGTCTCAGTGATCCGGTAAGAATCTTTCAGCCATTGGGATAGAATCCTGC
AGCTAAATTTGGGAAGATGGGAAGGGAAATGTCTTACGTTTAGCGGGTGA
TGATTTTAAATTCTATTCTTTACAGATTAAAAGTTAGGATCTTAAAATAA
TAAGACTTTCAAACTATGATAAGACTTTCAAACTATAATAAGACTTTCAA
ACTATAATAAGACTTTCAAACTAGGACAAGATTACAGTGTTATTTTCAAA
TGTAGAAAAAAATGAATCAGGGATGAATTTTTGGCAGATTTTACCAGTTG
TTAAATGGTCCACCGGGTCTGTCAGTCTGTGACACTTTGTTGTTTTTTGT
AGCTGATAGAATGAATCATAGTACCTAATGTTCCTAATAGAATGATAGTA
CCCTAATACTACCTAATAGAATGATAGTACCCTGATAGAATGAATCATAG
TACCTAATAGAATGATAGTACCCTAATACTACCTAATAGAATGATACTAC
CCTGATAGAATGAATCATACTACCTAATAGAATGATAGTACCCTAATACT
ACCTAATAGAATGATACTACCCTGATAGAATGAATCATACTAGAATCATG
AAAAAAATTAGAACTTCATTGACTTCTAATACTGTCTACCAGAGTCTGGA
GATGTTGCTTATGTCTCAATAGAATATCTTTTGGATGTTCTGTTCGAACT
CTATGACTTTTAGAAGTAGAAATACGACAGAAAGATTTTAGAGAAAGTTT
ACAAAATTGAAATTAGAGTAATCCTTCAGCTAAGGAGCTTTGAAAGACCT
TCTTGCAAAAATTCTTAAATCATCCAATTAGAGCTACACTTCAATCTTAT
TAAGATTTCGTGTCATGTTGCATTCCAAACGGTTTCAGAAAATGATTTCT
CATATGTAATTATGTACTGCAATGGGGGCGTCACTTCCTAAAATTTATAT
TCCTAACCAAGTTAAATCAACAATCAAGAAGATATTTAATTCCGTTCAAG
AAAAGGCGTAATAGAAGACACCATCGTGTCACGGACCCGGCTGGATGTAT
TTTTATTTTACTGATAAACGTTGATACAATCGTGTGCGCTATCAGAATCA
TAAAAAAATGAATGAAGAGACCGGGTTCGAGTTTGGGTGGAACCCCTTCC
CTTTGGGGAAAAACAGTCTTTAATTCATTCATGATTAGAAAATAATACCA
GCAGAATTCCTCATTGGATTTTTTCAAGCCGTAGGTAGATTTGAAATCCC
CCCCCCCTGACTACGCACAAAATATTTTACATCCCCATTGGTACATCTCA
ATCCTTCATTTTATCACCCAATGTTTAAACAATTCTTACATAAGGGCTTT
TAGGACAATACCCTAAAAGTCCATTCACTTTAAGTTGTGCACTAATCTTC
GACGAATGTTTCAATTCAAAAATATTATATACCGAAAAATAATTCAAAAA
ACTTTAAGAACATGAAGATGAAAAATGAAGAAGAAAAAGATAAACGTTTT
AACCTTTGGTGCTAGAAAAAAATTTGGTACAGAAGTGCTTTGAAGCTTTC
TACTTTCCTTAAAATTTTAGGTTTGGTTGGTAGTGCAATCCTACTGATAA
CAATCTTCTGTGCACACGCTGTAGCAGCTGATAAAGATGAATATGAAATA
AGTATCGCTGGTCGAATCGCAGAAATCAATATGAAGAATACTCCTTCTTC
AGGTACACGTTTTTTTATAAAAACATAAGGCATCTCTTAGGAATTCCTCG
AGGGAATTCTTTTGTAATACTCCCGAAACAATCCCACAATGCATCACTTT
TTTAGAAATATCAAAAACTCCGATAAGGTCTATTCAGCATTTCTTGATAA
TTTTTTATTACTTTTTTTTTTGTAGACGATGAAAGGATACCAGTGGAAAT
GACAACCAACCGTAAAAGACGTGCCGCTTTCTATATCTTCAATAAATGGG
ACAAAAGTGCAGATGGGCTCGTTTATGTACCCTACGAGCTTTTCCAAATG
GGCAGTCAAGGTAAGAGGGGGTCTATCTAACAAATACTGCATTACTAAAA
ATAGACAAATAGAACGACAAATTTCATATTTTGCCGCCCACAACCCCGAC
CGAAAGTGACTGTACCCCTACGTATTCATTCCACTTTGTTTATCAATTTA
AAGGAACGACAAATTACGTATGCGTGTTTATTAATGCAGCGTTGTTTCAA
CGTTCATCTAACGTTACATGGACGTTGTGAACATTAGATAAACGTTGAAA
CAACGTTTTTTCTCAGCTTGGAAGCGGTTAAAGGTTCTATTTTTACATAG
TGTTCCCGTTTCATAACAGACACATATTTCATATCAGGACATTGTCTGCC
TTTTGTGATATTATGCTGATATAAGCAAAAAGTTGTGTTGTTCTTTTCCT
CTTTCTGACCAATTTTGCTCCACATTCGTGTCAATCTAATGTGAACAGCT
TGTGAATTAAAATTGATAAGCAAGCAAATGGTATAACTCTTATTTAAAAA
CAAAACCTTTAAATTACAATCTGTCTGTCACCTTAGTGGTCCATCGTTTC
CGCATTTGATTCATCACATTTATTTTTTCACGACACATTCCGCGTGAATA
AAGACGCTTTCTAATTGACTCTAAAGAGCCCTAGGATTTTCGGTACATAT
TTCGTTCGATTTTTTTTTCAGGTCAATTTGCTGTAGCAGCTGCTGCCAGA
GAGTTTGAAAATAAAACGTGTATTCGATTACGCGAGAAGAGACCAGAAGA
TGAACATTTTATACGAGTTATTGACAGCTCCTTAGACGGGTATTAGCATG
CACACATTCATTCGTCATATTCTTACCCTTCCAAAAGCATCTAGAATCTG
AAAAACAGTTTGCTTAAGTAAAATTAGTCAGGTCCAATTGCGCCATTAGT
CTATCAAAACAATTTAAGTGGAGCCTAGGCTACTTAATAAACAGCGAGTT
TATGTAACTGTGTTTTTTGCTATTGAGACGGAAAGTTTCTAATTTGACTA
CATCTAAACTGACTGAGGACAAAGCTGAATATGAACTTTTACCGTTCTTG
ATTTTGCGGGTCAGAACTGCGGGTTTTTCCAAATCGCTTCAGTCACTCTA
CCGTCCTCAAAAGTGCAAATACATAAAATCAGTAACATCCCGGCTTCAAT
GGTTCTCCTTTTGGGAATTGAAAATCCGTTTTTTTGATGAAAAAAGTTAT
TAAAATGCTATGAAAAAGTTTTAATAAAGAAAGGAGAGTGAACAATAAGG
TCATTACTGCGGACAAGGCTTGAACATGAAAAATCAATGAAAAACTATTT
TTCCTTTCTTTTTTATAGGTGTAGTTCATCAATCGGGCGAGTAGGTGGTC
GACAAACTATCTCCTTAGCAAGTAATGGATGTCAAATAGAAGGAATAGCT
ATCCATGAGTTCCTCCATGCTTTGGGACTTGGACACACGCAGCAACGTGG
TGATCGAGATCGTTTTATGAAAATTGATTGGTCAAATATACAGATAGGTA
TAAGATTCACCCAGCTCTAACAATGCCGGTTACAGAAAGTACTGAAAGTT
TTCATGGGAGAGTATTGATTTTCCATCTGAAATGAAAAAATGGATTTTTA
CACAACAATTAGCACATATTCTTGAAATATTGGCGAATAATACAGAATTC
CAAGACCGAAAAGCTCTTTATACTTTGCTGAGACGGAAATCCGTCTGAGA
CGGAAGAACTCCCAGCTGATACACAACGTTGTTTCAACGTTCATCTAACG
TTATATGGACGTTATTAACATTAGACAAACGTTGAAATAACGTTGTGTGT
CAACTGGCTATTAACACGTCACGTAACACGTGATTTCGCGAGTATTTTCT
GTAACCACCGTTGTCTAAAAAATATGAAATAGAAATCTTTCAGATGGCTG
ATACGGAAAACACCACAGCTGCAAAGGGCTATGGCGTAATGTCTTTAATA
CGGAAATGCCCAAAAAGACCGGATTTTCGCTACTAATTCTGATGAATTTA
AACAATATAACTAACTAGCCGTCCCGGCGTCGTCCGAGACGACTTCTTAC
TCCTTTTAATACGCTCGCTTCGCTCGCTTTTCTATTTTTCAGAAACTTGT
AGGGATTTGTATACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCTGTTTTTTGGGATCAATCACTTATTAAC
TTTGTATCATAACTTTTTATTGAATAAATATTTTAATGAAATTTCTTCAT
AGTGATGACCTCCTAAGATCAAAGAATCTCTTCAGTGAAAATGACAGTTA
TAGCACTTTTCTACAAGATCTTCATTTTTTCTTCTTCATTTTCATCTTCA
TTTTAGAATTTTTTGAAATTTTTTTTATTTCAAATTGTTCCACTCACTAA
TATCTTTCCAACGATACCAAAATTTTAAAGATTGAAGAATTCCTTCAAAA
GTTATAGGTAAAAGAAAAAAAGAGTGCACACTTATCGTGAATAGACTTTA
GTGGTGAACACCTGGGCTTTTTTGGTTGCTTCCATCTATATCATCAGAAT
ATTATTAAATCCCCCAAAAAAGACATTTTTGCTCCCACGTTAATGTTAAG
GAGATCATCTTTTCTGTCCCAGGAGACGCCTTCAAAAATCTGGTAAATCC
AGGAGGTCAAAATGCGAATTGAAATTCGTACGTTTTAAAACTTGAAAAGA
ACCCAGAGCAGAAAATCCTGGAGTTTTATCAGCCAATTCAATGTTTTTCG
GCGATCCAAAGAATATCTGCAATCTGATTCGTTAAAAAGAGTACAATATA
TCTTGTATTTTACATGTGCAATATAAATTGACGAAAAGATGTTGTTGCAT
TGTAGCAGTAGAAGCAATCTAACGTCACTTTGCTACTAAAGTGCCCTGCG
CTTTTTTCCAACACAAAAAGTGCATTTTTTTGTGTCACCGATAAACCAGT
TATCATACATTTGATAACTATTATATATTTTCAGTGGTCAATTTACTTAT
ATTATTATAAATAACTGTCCTTTCGAAATCCAGGAACTTGTCGAGGCTAA
TCTGACAAACTTCTTATCTGACAAACGCAAACAAAGTATATGTATCCTGG
CTATAAAGATTTATTACAATATTTTCAATATAATATTTTTAGGTTTTGAA
GGCAACTTTCGAATACCACCTTTGGATTATTTGGATGTGCTTGGTGAACA
CTTTTGTTATGAATCAGTTATGATGTATGGAAGGTAGGCAGATTGAAGGG
GACTTCCTTATACGTTATAAGAACAAACCATATAAGAACATAAGGCTTCG
CTTTCCAAAATGTTAAGAACAAGTTAAGAACATTTTAAGGCTTTGTGTGT
GGACTCAAAAACATCCTATTTCTTTGAAAAATGGTCAAAAATATTCACAA
AATGGTCAAGAACATGTTAAGAACATAAGAACATGTTAAGAGCATTTTTA
GGGCCTAAATCTCAAAAAGTTAAGAACATCCGAATGCTTCAAAATTTTAG
GACGTTCTTATAAACAAAACGTGCACTTGCCGTAGAAAAAAAATCATGCA
CTAAAATCACAAATCTTATGAATCCTATTAAGGTTGAATTTTGTAAAACG
AACCTTAGGCGGGACTAATTTACCCATTTTCCTTGCTCTATTGCCTTAAT
TCCGCCATTGAAGGAGAAGAGCTGCCTCGCTATGCTTTTGTATCATTATA
ACTAAAATTAAAAGAGTGAGTGAGTTGCGATATGAGGATTTGAAAAATAT
ATGCAGTGTCTCCATAGCTCGAAGCTCTTTAACTCGAACATTTTTTCAAG
ACTTTTTAATTAACAATAAACAAACTTGCGTTCCCCATGCAGTTCGAGAC
CGGGGAGGGGGCACTCGAGGTAAACGACCCATCGTACGTGCGGCCCATAT
GGCCCAGGGTTCTTTTTCAAAACTTCCCAAAGTGCACTGTAAGAGTCGAA
ATGAGCAAAGATGAGAAAAATTGTACTCTAAGGGTGTAAAATTTGTAAAA
TATGACCATATTTTACCTAAGAAAGGTAAAAAATTCTCAAAATAATTCGG
GTCGATTTTCCACCAAAATTTACTCAAATTTGGCCTAATCTTCTCTACAC
TTAAGGGTCCGATTCCAAAGGCCTAATTTTGGGCCGCATTTGTGGTCTTT
TTCGAGTCCCCACCCCGGGAGTTCGAGTTATGTAAACTCCACTGTGTATA
CTTTTATTTCGGCTTATAGGAGGGATTTTGCAATTGACCGGTCAAAAGAT
GTCATCTCTACACCAGGATACGACGGAATAATTGGCCAGCGAGTGACATG
GGCAAAATGTGATATCGACCAAATTAATCGTTATTATCATTGCGAAGATT
ATGTGAAAATCAAGGGCCCTGGTGAATAACCTGGAGATGCTGTAAATATT
GAAAGAAAGAGAGAGACAAAATTTATTTAAACAATATTTTATATTAATGT
TATGTGTGCCTTTTTTTTTGAAAAGATACCACTGTAGCCTGGGGGTACTA
GGTTTGCGAGAAGACGGGTATGTCCGAGCCAAAGCGTGAAAATTGTCCCT
TAGAAAGACTGAATTTTGTCAATTATTTTGACGTTTTTGCCTCCCTTATT
TAGACAGTCTATTATCATAAGTCACAGTCTATATTATCAAATTTTTGGTC
CAAATTTCAAAAATGTTTCTCTTCCTGGGCGCGGTAGATAAAATCTTCAA
TAGAAAAAAGCACACACCCCTTTTGGATGCCACTGCTATAGTGAGATGTG
AGAATTTGATTTATTATGTTATAACTGGGTTTATTATTTATATGTAGAAA
AATAAAGAAAAAAACATATGATACTGTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002523TCONS_00002523Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002523-proteinTCONS_00002523-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:760645..769624 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0	0	0	0	0.03	0.08	0.14	0.15	0.25	0.06	0.1	36.57	24.61	0.05	0.02	0.02	0.07	61.75	123.61	0.03	0	0.07	0	0	0	0	0	0	0