XLOC_001343 (gene) - C. hemisphaerica

Overview
NameXLOC_001343
Unique NameXLOC_001343
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:543191..550725-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001343 ID=XLOC_001343|Name=XLOC_001343|organism=Clytia hemisphaerica|type=gene|length=7535bp|location=Sequence derived from alignment at sc0000020:543191..550725- (Clytia hemisphaerica)
TTTATTTTGAACGTTGAGACGACTGGTCACGAAGATCATGGCATTAAGTA AGTATTGATTTAAAAATTTTCATTTGAAAAATCTTATTAGCAATTTCTAA ATCAATCAATATAATAATGTATAAGGATTAGAAGAATCCTGGAAAATATT TGAATTTGAAAATTTAAATTGCTAATAACTCCTGGAATATTTATCAAAAT GAACTGAAATTTGGTACGAAGGTAGTGTTTATAAATATATTTTATTTCCA AAAAAAAAACTTTCCAAAAAATTGATGACGTCAGCATTTTTTCAGGAAAA ACGAAAATTGCTGATATTTGCTGACGTCATCAATTTTTGATTTTGTTTTT TGGAAATGAAAGACATTTATCCACCCTACCTTCGTACAAAATTTGAGCTC ATTTCAATAAATATTCCAGGAGATATTAGTATTTCAAATTTTTGCTGACG TCAGCAAAAGGTGTTTTGCCTTAAATTTCCCCAAATGGCTGAAACAGAAT TTTTGGTATTAATATGAAGAGTGAAAATAACAAAAAATTTTCCCATAAAA AGGGGTGGAACAACTGGCCGTCACGGCCGTCACGATTTATCGAATTTTTT GCACAGGCCTTAACTTGCCTGAGTTCGCTCCCCCGATAACGTTGAGCTTA GCAAGTAGGAGTACACGAAACAAGGGTGTTCCCGCCAAGGTTATAAAAAA GGAAAGAAAATTCGTTTTTACTTCTTTCGCATTGCGTGAAGATAAATTCT TGAACTATATTTGAAACTTTTTCCTACCTCTGCACATCATTGGCAGAAGG GTGTAAGAATAAACATAAATTTTTTTGCGTAATAAAACAAGGCAGCATGA AAGCCATCGTGAGCTTAATAAGTAAATCGGCTATTAATAAAATAAGAACG ATTTAAGTGTCAAAATAAAGGGACCCGAACTCCACCCCCTTTAAAATTAT GTGACTGTCATTGCAGAAATTAGAGGGTGATTTTCGATGATAGGTTCAGA GATGTAGAGAGTCAAATGCAGTGGTAGAAAATTTTAGAAAAATCATACTA TTTAGCTTTAAAACAGACATTAAAATTTTTACATGGACTGAAGGAGAAAA TTGAGACGTCTAGCGAAGCTTTTAGGCACTTCTTTGCATATAATTTTTTT TACTAACTGTATGAGTAAAATAGAGGGCAAAGGGAGAGGTCAAAGTAATG AGAGACTGTTCATTCATTCAAAGCTCTCAGAAACTCTCTTACACGTTTTT TCATCCCATATAAGAAAATTTTTGAAGCCTTAGGATGTTCTTATTTTTTG AGTTTCAAGTCTAGAAAATTTCTAAGCATGTTCTCATTTTCATGTTTTGA GTATTTTTGTCAATTTTCCTTAAGAAATCAGGTCTGCAAAGCCTTAAAAT GTTCGTAACTTGTTCTTAATATTTTGACCACAGAAGCCTTATGGTCTTAT ATAGTTTGTTCTTAAAAAAAACAAGTATGACAGGTCAGTATACAACTCAC ATGTCAACTTAAAACAAAAAAAGTAGAAACGCATTATTTTATAAGGATTT AAAGTCAATGGGGAAAAAGTAAGTAACTTTACTTTTTAAAAGATTGTTTT GACAAGAAAATGTCCATTAAAAAAGTGACATGTTCCCATTAACCAAGACC TCTCAGCTTTTTGTATCAGGTTGACAATTTTTTCTAATTACTGTACGAAA AAAGAGATTTTTCGTTAAAAGTGCTATTAAGGAGAACTAAAATCAAGATA CAGTATTTTAGTTTCTTCACTGCCAAAATGAAAAATGTGAGGGAAGCAAA AACGACCCTAAGGGTTTTTATGCAAGAAAAGGGTCAGTGATTCTGACAAA TGCTGGCCATGCATTGAATGACAGTTTAGAATTTACGTAAGCGACGCGAA AATTAATAATGCATCATATAGAAAATGAAAAAGAACGCTCTCACTTCTAG CATTAGTATGTGATATTTTAGTCATCCCCACCTGAAGACAATTTATAAAA CAAATCAAATGCGAATTCATATAAAACGTATCAAATATGTGAAAATTTTG TGAAATTTCATCATTCCAAAGATGCGGTAGTTTGTTGAAGGTATCAGCGC ACAGGGAATTATACCGATATCGAAAAAACTATTATTTATTATATAAAAAT ATTTTAATTATTTTCGCGGCGGCAAAAATGAACGAAATTGCAAAAGTCGC AGCTACATCAATGATAGATATTGCAAATCAAGGTAATTATTGAATAGAGA CTTGTCAAAGTGTTGTAATTATTTTAAAGTGATATGAGATTTCTATTTGT ATTGTATTATAGGTTACCGTGTTACTAAGAATAAAGGATAAATCAAAAAG CGTCAAATGTAATCAAGCGACGGAGTTTTTTGACGATAACGTTTGTTTAT TTGACGGCATTTATAAACAAAACAGATCAACTTGTCAAGGTTTCTCTGCT CTCTTACTCTATTGACGTACTTATTCAGTTTCCATTCATAATCCAAAATT ACTCATAACAATAGATAAACAGAAAAAAAACAACATCAAAAAATAACAAA AACAAATCTTTCTTTGTTTCTCTTTTTTGAGTAGAGAGAGAGAAGAGAAT CACGATCATTTGTCACGAATTTTAGTTTGTTATGATTGGTTTATTTTTAG CTTTAACTTCAATTTGATTGGTTGAGAGAGAATGAATGGCCATGATTGGT CGAGTGGTTTGTTTTGACGTTTAATTGTCTTTTACGCCTTTTGAATGGAC CCCTCTTTTGTTCTAAATGATAAAGAAAGCTTTTTAAATAATTGTTAGAC CGATTTGTATAGAGCGAGTAAGAGAGAGAAAAAAAAGCTATATAGTTGGA GTTTTTAATTGAGCTCTATTATAAAGAGTTTACTCGAGAAGAAAAAAAAT TAATCAGTCTTTTAGGAAAAAGGCCGTATATAACTGAAGGGAATTTTAGA GAGAGTGCATTAGTTGAACAGGACACTTTCATGAGGTAACATCTCAATTT AAAATATTTTTTTTTTTGGAATTTTTTTTCTTAATCTTTTTTATATAGGA TATTCTTATAAAAAGATGACCTTAAATTTTTTATAAGATGATGATTTTTT TCTCATTTTTTCAATCCCTTGTGCAAACTGTTTTGGGACAAGGGCTTGAT AGAACATCACAGGGGGACCTGAAAGGGGAGGAGATGTCCATGCAGTGTTT TTGACATTCAGGGAAAAAACAAAAAGATTGAAGATGAAAAAGGTCACTTA AAAATTAATGATTTTTCTACACTTTTGAAGCTATAATAAGCTATTTTCTA ACTTTTTACGGTGATAAAAATTTGATGGACCATTCATTTGCATTTGGGAA AGTGATTTTTAATGATTGACAAAAAAATGGGACAATTTGCTTTTTTTTCT TAATTTTCAACTTCATTATTCTTAATTTACTTTTCTTTTTGATGGTACCT GCCAATTTAATTACTCTTGATAATTATTGGTACTGCTAACAAAGAGAGAA GACAAAAAGCGGAGAATAGGTGGTAGAACAATAGAATTGTAATTAAGAAG ACTCGATCGGAAATCAAATGACCAATTTAAATTTATGATCAATAGCATCC GTTAAAAATATTTTCCTTTCTTTTCAATACTATTGTTCTACTTTCATCCG CTCATAAACGACTCTTTATTCTTCTCCTAATTAATAAAAGTCGATGAAGA GAATTAATTTAGTTACATTTCAAGCATTGTCGTCTAAGCATCAAGGTCTA AAAAGCAAACATCAATTCAAACAACACATTAATTATAGACTGAATATTTA TCTTATCTATAAATGATAAATTTCAGTATTATTTTTAATTGATCGTGTTC ATGTATTGATAGCTATACCTTATACTTAGTACATTCGAAGTGATTACTGT ATTTGGTTTTATATTGGTGTGGTTGTATAATTGGTTTCAATATTTTATCA ACTCAATAGAACGACAAGAGAAGCTACGAAACGATTTAACATTTGCACAC ACACAAATATCGACACAACAACAAAACAACAAGATGTTTGCGGGATCAGA TCTCTCCAATAACGTTGTTCCTGACCCAACTGCATACGCACAGGTAAGGA TAGAGAATTCTTAGTAATTAGCTATCTATTTTAGAAAATAATAGGATATT TTTAATTGACTTGAAAATGTTTTTTCTACAGTAGGGTATCGATTTTAATA TGTTGTTTTGATCAGTGAGACGCATGATCAATGAGACAAAAAACGTCTTT TTTATTAAATTTTTCTATTCACTTTTAAACTCAATTACTGTTAGCTGGGA GTCTATCACGGGACGAAAAAATAAGGAAATTAAATCAACGCCTACTATAG AAGTTGAAAATGTTTTCAAAAATTCTCCCGTTTGCTTTTTTTATAATTTT GGCAGTTTCGGACATATCACGAAAAATAACCTCTCGAAAGTCATGCTTCA ACTTGTAATAACCCAATTCAAAATATGATTACGTAAAGCACTTATTATGT TGAAATTGTTTTGTTTATTATATTATTCATGAATCGTTCAACAAAATAAT AAAAATTGAATAGAAAGAATAAAAGAAAATGATAGAGAAAAAAAAATTTT CGAAAAGATAATTACTGTATTGAAACTATTATTAATTTTCTCTTTAGTAT TTTTGCGAAATAGTTAATGACGCTTGAAATCAAGAGGTTCTTTAATTTTG AAATCAATTATATAGTGCATTAGGAGATCGAAAGACCGAAATTTTGTGCA AAATAACAAAATTGTTTAAATAATTTTCATTTCTCTTTTGTAGGAAGCAC TATCAATGGGCAGTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAAC CAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATG GTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGATTTTCATATACCAC CAAAACGAGCTAATATGTTTGAAAATGAAACTAAACCTGAAATTCAACCT GAAGATGACAAGCGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAA CGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAA AAGATGTTGACGTTAACACCTTTACAATGACGGGACAAGAATTATGTAAA CTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCATACAACGGCGATAT ATTGATGGCGCATTTATGCGTCTTACGCAAAGGTATTGATGTGTTCATTT TGTGTTTTTCTCATTTTTAAAATTGCCACTTTTTTTCATTGTCAAGTGCT TTTTATTTGAATGGGTTTTTTTCAGTTGATTGTTTTTTTAAAGAGAGTCG TTAGTGGTCTTCAAGTTAATTACAAATCATTATAAGAAAATAGCTTCAAA GCACAAAATAACATTTTGAATGATAGAGAGCGGTCACATCAAATAAATGG TATTTAAAAACGGTCGAAAGTCTGATTTAATTGTCTATGTGGCGATGACA TAAATTTATCTTGTTAAAAAATAAGTGTTGCACAAATAAATAATATTATT TTTTTTGTATCATTTCATTTATAGCACCTTTACCAAATCTCACAACTGAA GATATCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAACGG CGCTAAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGT CGCCACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGAT GGTTCGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTCTTC ATCCTCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCCCTT CAAAATCATTCGAATCACCCCCAACATCTCACAGTGGTAAGGACATTTTC CTCCATACTATAATTTTGTATAAGGTGGCGTTGATTTTTCCTTGAGGCTA AATTCTCACGTAGTTCTATTTTTTTTTTGCCTAATACTTCAAGCTTCAAG TACTCATACTTCTAAAAAACTTCTGACTGTTTCTTAATGTTGACGTCAGC AAAAAAAATCTTGAAAAATTTGTTATGATAACACAAGTATCTAATTGCCC GCCTTCTATTTTGTCATTTAAAAAATTTCAACAAAAAAAATGTTTTCCTT ACTGAAGCTTCTTAAGTCCAACTAAGAATGATAACAAGCAAACTTAAGTG TGGAAATCTACTCTTAAAACTCATAACACATCACATCAAAAATTACAAAA ATTTATAACAGAATTTCTCTTTTTTTTTTCAACAGAGTACAACCCGTCAT GTCCCTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGA AGCGGACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCC ATCACACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAAC TTACCGACCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAA CCCAACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGA TAAAAACATCATGACCAAAATTCACGGCAAACGATATGCATATAAATTCG ACTTTCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAA TTACACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATT CTACTCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACC CATCGTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAAC CAATACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAG CCGACAATCATCGGCACCGTACTTTTAGAATGGATTGATTGACATGTTCT ATAATCTTTAATAATATATATTTCTATATATTCTTTTGACTGTTCTTTGT AACGTACGCGTAACTGCCCTTCAACGTGCTCGTAATTTTGTTGTGTTACG AAATTACGAGTTTTTTTAGAGAATTTATTTTATTTATATTGGTTTTTTAC CAATGCTTACGTATTTTTCCTCTTAATTTTCCAGCGCAGTTTCTATCTGT TATTATGCCTTGAGAATTTTGATTTTCAGTATTTGTGACAAAGGACCTCG AAATTTCGAAAGTTTTTTTTGCGACCAAGTCGAAAACTTTGATATTTTAC GAGATAATCTAAAATTTTACAGTTTCTTTCTGGTTTTGCGGTCCACATCA ATTATAGCATTTATTATATTATTATATATTGTTATTATTATTGTTTGACG CGACTTTTTGTTTCAAGGTAAAAAGTCGATGGACCAAAAAAGCTAAAAAT TCTATTGGTGTATGAAAGGTTTATATTTTTATTCTTTTATCCTAAGTATT AAGAAGATGCATGTGTTTTTTGGAGATGTTTAATAAAAAACGAAAGATTT ATTATTTGTGACTTATAATTGATATTATTACATATAAAAAAAACATTTAA AAAATAAATAAAAGTTGAAAACTTTGTGTAAAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002512TCONS_00002512Clytia hemisphaericatranscript
TCONS_00002511TCONS_00002511Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Erg proteinTCONS_00002512-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:543191..550725 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0.39 0.16 0.13 84.46 66.51 79.85 87.5 114.3 124.5 70.58 220.36 222.85 219.12 384.46 340.38 86.22 152.88 74.38 49.75 25.78 24.96 10.56 13.59 3.94 5.88 32.84 5.47 9.68 10.15