XLOC_001216 (gene) - C. hemisphaerica

Overview
NameXLOC_001216
Unique NameXLOC_001216
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:142830..152341-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001216 ID=XLOC_001216|Name=XLOC_001216|organism=Clytia hemisphaerica|type=gene|length=9512bp|location=Sequence derived from alignment at sc0000019:142830..152341- (Clytia hemisphaerica)
GTGTCAATCTAATGTGAAAAAGCTTGTGAATTAAAATTGATGAGTAAGCA AACGATATCACTCTTATATAAAAATAAAACCTTTAATGCTGATATTAATT TTCTGCATTACTTATGTTTAGATATCCACCATTTACTTTAATATAAAATG TAATCTGAAATAAAAACAATGTTGATTCTTCAATTTTAACGACAACAAAG ACGACATTTTGGTGGTCAGTTAAAATGATGTTGGCAGAATGTCAATCAGC TTGTGTACTCCTAACCATTCTAAGTAAGTTTTTATTTTATATCTTGCATT ATAAACTTTATCTTTCTTTTGTGAAAGAAGTGAGGCTTTTACAGGCCTGG AATGGAAGAAGGGGAGACTGGGGAGACTTCAGCCTCACCAGAATCACATA ATTCCCATTCCTGGAAAATGTTCTTCCATATCAATATAATATAATACCAA GAGGCTGGCTTTGGTATTTGTTTGCCTCACTAAAAATCCAAGTTACACTT CTATGTGAGTTGTGAGACCATAAAGCACAAAAGTTGTACATTTTTCTTTG TTACAGCTCTTATTGTCAACTCACAAGCTCTACTATTCAACCAAATTACG AGTTATGATGCTTTCTGTAAACTACCATCCAATGCCATTGTTGTCATATC TTCTCACGTGTGTGAAGGAACTCAACCGTATCTCTCATTGACTCATATAT CAAATGATTTCAAGATTATCAGAAAAACGAATTTAGAAACCCCATTCCGG GTCAATGGTTTGTATATTCTTATTTCAAATTCATTATATACCAGTCATCG CTATTTCTGATGAAGTTTAAGGTTAACAAAGTAGGCTTTCCTTTCTGAAG GTTTTAAATAAAGCATGATATTTTTCAGAGTGATATAATTTCTCATGGGG TGCACCAAAAAGTCTCAAATTCCTAGTTACTTTTTTCGAATCAGTCACAT GCGGCTTTTTTTCCCACAAAAAAGGTTACATACCCCTACTATATTTAGAT TGTTTTTATTACTAGTTGCGTTTTGAGGGTCGAGAATGACTTAAAAAACC TAGAAATACAGGAAAAAATTCTTCAGTCTCTTGATTGTAACTTTTTATTG ACTGAACCGGTGATTCATTAAGGTCCAAATTTTTCTTTTCCTTTTTTCTA TTCCTAAACCAAACTCTTGATCACGTCATCATGCAAATTGCTATAAATAG GTCCTCGAAAGACACTGATCTCGGGGGGGGGGGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNGAGGGGGGGGGGGGGGTGAAACCTTCTGAAAAATCATTTAA GAAGGGGGGATCAGACCCCTTTCCGTACTACGATTACTGAATGTAGTGTA ACTTATTTTATCAAATCGTTTCTCTTGTTAGATGGAAAGACTGACGAACA CGGAGATTTTTCAACTTCCCTCTCAAAGACTGATGGATACCTCAACCTCA CTGTAAGTAGCCATAATCTTTGTTTTATACACTTTTGGCCTTAAGAGCAC AATACACATCCCTTCTCCGGGTATTGGGGTACTAACTTTGACTGCTAACA TGGACCTTCTACCTCTAGAGTTTGAAAGATGGACCTTGTCAGAAAAATAT CCAAAGAAGATTCCCTTGTTTGCTCTAAATAATCTGACTTTCACTATAAT TACGAGGTCATTTTATGGGTCATAACAATAACATAGTCCTCGCCTCGTCA CGTCATTTTTTTGCAGTTGTCCAAATTTGTCAGTTTTGTTAAAAACATCC AATGTTTTTTTAAGCCTCGGATGTTCTTAACTTTTTGAGTCTCAAGCCTA AAAAAGTTCTTAACATGATCTTATTTTCAATATTTTGTGAGTATTTTTGT CCATTTTTTTAAAAATATTGGGTGGTTTAGAGTCCATAAAGTCTTAAAAT ATTCTTAACTTGTTCTTTAATATTTTGGCCATCGAAGTCTAATGCTCCTA TATAATTTGTTCTTATAAAAGATCATATAATGGTAGACTGTATTTCAATC TTATTTTCTAGTTGAGTGTGGGTATTGGTCGTGGTGTCGATCCTATCAAG CATTCGTTCATTTTCCCAACAAAATCAGTTGACTGCCATAGTCAGGAACG TCCTAAAAGTAAGACCAATTTATAAGTGAAAGTATTTCAAATCATTTACG AGATAATGCTTTTTTTGAGATCTTGATCAGAAGAGAGATGGAGCATGATT CTTATATTCAAAACAGCAGGAAAGGAATACCCAAAAGTCAATCAATATTT AAGGGGAAAACATCAGTGTCTCAAGGCATCTTTGATAGGCCTAAACCGAA AGACTCCATTCGAAAAGTACAATGTATTTCTAACCTTTCAAAATGGAGGA CTCATATCAGGCCTGATAAGATTTTCTATCATCAAAATGTGTGACATGCT TGTTTCTCATTTTAATTTTTATACTTTTTTAACTCCAAGTAGTCATAGTG CTAATTTGGAATTTAGATGTTTTTCTTTCCATGTAGTGACCTTGTCCAAG AGTTAAGTCTCCCCAGACATGCCCCCTACCAATAGGTTTCCTTTATGGGT GGAGGAATACTTATGAGCGGTTGTGGTTTTTTAATCACTCTTAGCGTCAA CATTCTGTATTTATATTGTACCGTACAAATACATGACCGCGTTTAAAAAA GGGGTCTGGTAAACGAGAGATCATATTATTTTGTACAATTTTATGATTAG AAATGTTTTCTTTTCGCTTGCACAACAACTGATCAAAAGAATGTTTTTAT CTTTTTGATGAACATTCGATTCTTTTTCGAATGTTTTGATGTTGATTGAA AATGATATATATCTTGCGATAATTACTACTTTTTTCATGATTTTTATAAT CTGAGATTTTCAAATAAACGAGTAGAGAAAGGTTTTTAGGTTAGAAAAAG TTTTCCATATCCACCTTTATCTATCATCCATATCTATTCCGTTTTAATTT CAGAACCATCTATGGAAACGCTGAGCCAGCGCCTTGGTACATACTCAAGC GTAGTAGTGCCTTCAAGTGCAACACCAAAATCAATTCCAAAAATGATATA TTTCTTATTTGTTGATCCTTGTACTATACCCTATAGTTACACAGTATTAA CTTCTAATGGAGCTGACACTAAACAGTTTATATACACAGACACTAAAAAT GATTCTTTGATCTCGATGGCACAAACGGGTGTTTCGAACGGTGGATTACA CCTTGTCATTGAGAATCATAAGATACCATCTACATTTCAAGCTAAATTAT CATATTTATCCAAACAAGATGGTGTAGCTGAGACTTTAATTGCTGATGTG TACGACACCCAGATAGGTCNAAACAAGATGGTGTAGCTGAGACTTTAATT GCTGACGTGTACGACACCCAGATAGGTAGAATATGTCCTGCATCCAATTG CACTAATAAGAACCATGGCTTCGATAAAGAATGCATTGTAAATTGGATTG ATAAATATAACGAAACTCGGTACGTGGAAACCGGCCTTAAATTCAGACCT TGTGAACGCCCTATGTCCGGTAAGGTCTATTTACACATCACGAATTCTGA CGAACGAATGATCTTTAAGGATTATCTTGACATCGCATCACTTCGTGACA ATGATTGGTCGGTTGAACGAGTCAAAAAGAATATTATGCGATTGGGTTGG TATCCCTATGAGCGAACATTCACTAACAGTGATGGCTATTTGAAACTTGA TGGCGGTGTGGCGAGTTTATATGTTGCATACAGTGGACTTGGATCTCAAG TCATGGTATGTACCCACAGATCTGTAAAGCCCGAAGGGCTAGATTATGGC TTTTATCTAAAAGTGAGGCCTAGGTTTGGAAGGATTTCCTACCAAAGTCA CGTGACTAAAATATGCAATTTCACCGGTTTGAGAGATGTGAAATAGCGTT TGCCGCCTACTTTTTTTGATCTCGCGCTCCGAAAACAATTAAAATGCTAG ATCCTATCCATCGGCACGAAATTTAAAAAGTCAATTTTTGCTTCACTTTT TTTTGCTGGAGAAAGCTTAAAGTTGCCTATCTAGCCCTTCGGGCTTTACA GATTATATGTGAATGTACCACTCTCTATTTACGATGTCGGTTACCGACCT GGTGGGACACTCGATTTCAAATCAACAGCAAAATGGTTGCAAGTCAAAAC GATATATCAGATTTTTACTGTCAGACTTGCAATACAGCAGTCCCAACCCC CGGGGTTACTGGACTTTGAGTCATAATTAAAACACAGGGGGTGGGGGTCG GTAAAAAATGAATTTATAGATGCAAAAATCAGCACTTTTGAGAGAAATGG TCCAGGGAAGACAGATTTATCCTGATAAAACAAAATAGGTTGATCACTGT ATCAAAATGTCCCTAAAGATTTTAATACATTATAGTGTACTAAAAAAGCC ACTTGTCTGAAATGGCGGTTATACAAAAATTCTCGAAAACCCTTTTAGTA CACATATATGTCTGAGATTAGGTCCTGACCCCATTTGATTAAAGCTAGAT TTACTTAGGGGTCAAAAAATAACTCCTGCAGGTTTGTGGAGTCTCTGAGA TCGAAGAAATTTGAAAATTTTTGCTTCCTTTTTGTATGTATGTATGTAAT AGTTTATTTCAAGTTGACGAACAGGTAGCAACAAAGGCTAATAAAAGTCA ACGCTACTTTACAATTTGTAAGGTGATTACAANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCATCGATTGTTGTCACTCGCATCTTCATCAGGGA TCAGGATCTTGCCAGGTGATGTCGTTTTTGGTTGAAATTTGGCTATTTTT TCCATATTTTTAAAATTTTTGAGTAACAATGACCAATCAGATCAGAGCCC CGTTTAATAACATAAGTTTTTGACAATTTTATTTACTTTGTCAAATTCTA AACATTTTACTTTTACTCGAAATGAAAAAAGTTCTTAAATACCAATAGAC GATGTCGGCTTAACGAAATTCTCCCCGAATGATTACCCATGATACATTGC ACAAAAAAATTCAGTAAGTCAATATTGTCCGTGAATTTTTTTGCGCAATG CATCATGGGTAATCATTCGGGGAGAATTCGGAAAGCTGATATCGTCTATT ACAAACAAACCTTTTTGTATTTCTATAGATATTGCGTCACTTCAATGGTA AAATCATTCCATTATTGAATGTCTATTTCAATGAAACACGTGATTCCCTT TGTCAAGGTAAGTTGTTGCTTTGTTTTACTTTTTGTTTGTCTCTGTCATC AGTAACTTTGAAGTACTCTCTGATACCTAATAAACGGGGGGTTTGGAATA AGCGGAGTGTTAAGCTAGGGAGAGGGTTTGGAATAAAAATGTTCTGGGTG GAAAAATTTTGAAAAGGAGGCTAATAAGCAGAATTAGGGCAAAAAAAAAA GAACTTTCAAAAACTTTTTCCTAAAAATTAATAAGTCGGAGGGGGGGTTG GTATACTGTAAGAATGTCCTAGGTGGAAAAATTAATTAGCGGGGGCTGCT TATTAGGTACCTGAGAGTAACTTTCCTCGATAATCTAAATCAAAGGACTG AAGACATCTTTAAACTATATAATTCAGGATCCTTCTAACAGACTTTTTAG TTTTCTTACATCAGATTTACCGTTAGTGATTATTAGATATTAATGATTAG AAAATAAATTCTTATTTTATTACATGATATAACGTTTAACGTATCTCCTA CCATTTGCTTACACAGCATTTTTAGACAAAAGAAAGAAGTTTTCCCCTTT CAGCGCCGCGTTGCGCGAGCGAAAATTTTAAGAAAATATTTTGTTCAAGA AAGACTCAAAATCCTATCTACTTTCGAACCGATCACATGCGGTTGAATCC ACAGATATCTAAGCCCGAAGGGCTAGATTTGCAACTTTAAGCTTTCTCCA GCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTCGTGCCGATGG ATAGGATCTAGCATTTTAATTGTTTTCGGAGCGCGAGATCAAAAAACGTA GGNNNNNNNNNNNNNNTTTCACATCTCTCAAACCGGTGAAATTGCATATT TTAGTCACGTGACTCTGGTAGGAAATCCTTCCAAAGATGAGCTTCACTTT TTGATAAAAGCCGCAAATTTAGCCCTTCGGGCTTTACAGATATCTGTGGT TGAATCCCACGAAAGATGTTATACGGATCATAATGGTTGCCCCCTACTAT TAATACTTTTTTTCTTATTCAGCAGAATGTCTTAGTGGTGTTTTTTTTAC CAGTGAAATAAAACGCCGATAATATTAATCGATTTTATTATTTGTTAGCA TACAAACGTGAAGTTGAAGGTGTTACAACTGAAAGTCATCTCACGTCCAT TTTGATTGGTGTTTTATCATGTATCGCTGTTGTATTACTTGTGGTTGCCG TGGTGATCTATTGCCGGCACCGAACGCGTTATTCACGCATGCGCAGACAC ATGGATGATTCGGTTGGATTACCACACCGTATACAACTGGCTGATGATGA ATTCGATGATGATCTGTAAAAAATGAAAAAAATGAAATTTGACATTTTTT GTGATTGTAAAAAAACATTACATTTCACATGCTCAACATCCAACCCAAAA AAATTAGCTACGAGCCGGAAATACAAATCGAATTATTCGAAACTTCCGAT GAAAAATCGATTTGGATATCTATTTTTTTCCTTGACCCTTCACTAACCCA TTTTCCAAGTTTATTTTTTACCAGTGTCAAAATCCAATATCACCAGATAC TTCAGAACTTATTGCTATTACCTTTAGAAAGAGCTCAAAAAGAAATTTCA TTTTGGTGGACTGCTTTTGAGTTGTATTCGTATTATATAGTTATTTTTCA TAAATTACACGTTTTTTTTTTTATTAGAACACCTAAAATTTGGCTGAGTC CTGGATGTGCTTATTTTTTTAGCAATTTTCAGGCTAAAATGTTCTTAAAT GCGTTCTTAATTTTTCAGACTACTCTAAATCGACAATATGATAATAAAGA GCACTTAAATTTGGCAAAATTTGGACAATATTTGACTCTCGATTTTTTAA GATCCACCCCTAAATTCGGTTAAAACTGCTTAAAAAGAGGAAAAAATTGT AGTTTATTGTCATTTTTTCCAAACTGAGGCTGGACATGTTCTTAAAATGT TCTTAATTTTTCGACGAATTTCAGCCTAAATGTTCTTATAAACTGGGTTC TAATAAAAGAAAAAACGTGTACGTTACGAACATCGAGACATTAAATGATT TTTTTATGAATAGGAAGTAGTTTCGATAAAATTCGCTGGGAGTTAATCAC CATGGCAATAATTTCAAAACGAGGCAAGTGATGTTCGTAACGTAATTTAT GAAAAGGTCTATTAGATCTAATTTTTGAAGACTCTGTGATACACCCAGGG TAGTCTAGGGTTGGAAAGATATTTAAAGTTACCTGTAAATTTAAATTGAT GAAAATCATCCTTGTCAGTATTTGGCTGACTTTTTTAATGACATTATTGT GTTTTTGGCGAGACCAATTTGATTAGTTGTTTTACCGGCCCGATCGACCC TGAAATTCTGAAAATCGAAATAAAAATGAAATTGACTTTGGTATTAAATT TTTATTTTCATTGCTTTACAGATTGCCAAATTTTCAAAATTTTGGTTGTT TTTCCAAGCTTTTTAAAATTTGATGTTCAATTTTTCATTTTATCCATGAA TTCGACCTCTTTGTGTATTTTCATTTTCCAATTTCCATTTTTNGGTTTTC ATTTTATCCATGAATTCGACCTCTTTGTGTATTTTCATTTTCCTATTTAC ATTTTTGTCAAGATATAGTAGTTTTTGCTGCCTTTTTAGGAGATTTTATA GCTACTTTTATTTTTATTTTTTTCGCCGACCGACACTCTTTTTTGGGTAG CTTGACCCGTAAAACAACAAATTAAATTGGCCTCGCCTTATGTAAATTAT TAATTTTTTTTTGAAGTACCTTTGTATTCTGTTCTTACTTTTCTTTCATA ATCTTTTTTTTAAATTAATTTTTATGATGTTTACTTTTTGGTATTTTTTC CTCACTAGTATATTACACTCTCTTTTGATCAATTTTATCTACTGCAATAT TATACTGTAAGAAACAACTTTTTCAAACATTATCTGAAAAAAAAGCCTGA AAATTGTCTTAGAAACTTCTCTTCTCTATGTTTTTAGCTGGTTGGTCTGC AACCATTTGGTCTGTCCTTCTAAATATCATGTCGTTTTTGTAAATCCGGT CAAAATTAATCAAAATTTATTCTGCCATATGCATCATTGACAATAGGTTT CTAACACTTTTATAGATATTTTTGCTTCCTTTTTTACCATTTTGATTTAC TTATATCAATCGTTCGAATTTTATTTTACTCAATATGTTCATTAGGATTT TATTTATACATATCAATATGATTGCCGACCGAAAATACAAATATATTATA CTCCAGTTTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002292TCONS_00002292Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002292-proteinTCONS_00002292-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:142830..152341 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.92 6.1 5.98 5.92 22.56 15.97 22.74 24.36 15.17 14.15 10.37 11.11 15.74 13.61 7.97 7.99 14.18 14.41 14.57 17.86 16.06 15.34 11.77 13.89 18.85 21.67 15.21 13.7 8.45 8.56