XLOC_001192 (gene) - C. hemisphaerica

Overview
NameXLOC_001192
Unique NameXLOC_001192
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:528105..539762+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001192 ID=XLOC_001192|Name=XLOC_001192|organism=Clytia hemisphaerica|type=gene|length=11658bp|location=Sequence derived from alignment at sc0000019:528105..539762+ (Clytia hemisphaerica)
ACGATAGCTGAGCAACTCCTGAGTAACGAGCAAATGAGACTCTATTTCTT CATGGCATGAGTTATCTTATGGCAAATAGATAAAAATAACCAGACATTAT CAAAATAAGCAATAAATTAGCTTAATTACATCGAATTATACCGTTCATTG TTTGTCTAACCTTCCGTCgactaattttcattttaaaaactaaTGGTCTC TACTAGACCTTCCAATTAAAGTACACTATCGTTTGAAGTTATAAAGGTTC TTATATATGTATGTAAAAATTGTACAAATTATCTATAATATTATAATACT GTATTATCGCATCTGCTGACATCCCTGTTCGCAGCCCCAATGGGAATATA AATTTCTTACGAAagctaaatgaaaataaaatcaaagtcaatttctcagt gagAAATTTTACCagtgggacgatattttggtcaaactTTTCCAAATGGG ATGTCTGACAAGGGTTTGCTACTGCTTATGCAGGGGGTGTACCAGGTTTG CGAGACGAGCCAAAGTACGAAAATAGAACCTGCGAGAGACTAAATTCTTG ACGTTTTTGTCACACTTAGAGAGACAGCTTCCCTAAGATTTcaagcaaaa ttttcaaattctagtccaaattaaaaaaaattcatgatctTTTGAGGGAG ccgatttttcattttcgtgattttggaacACTTACAGAGACTCGATTGCT TTTAAATGATTATACCCCATATGGCTCGCACTTACCCGGCGCCCAATTCG CCTAAGTATCCCCCCGTCGGTTACGCCATGTCGAGTATAGAATATTCTTT ACATTAATATAAAATTCTTTGTGTTCAAATTAATATTCATTGATTCCATA TCGAAATCTTCAATGCTgtgttctttattttcttttgatcatttgGTAGA TTTCTTATCGCTCTTTTCAGTTTTCATTGGTATAGACAAATGCTTTGTTA TTAAAACAAAATTCATCAGACAATTTTCCCATTTTGTGTATCTTTAGAAA ATTCAACTGAGGACAATGACTCCTTTTCATTCCGGATAATATCAACATTG AAAGTTTTATTATCAAATGAGAAATTTTCGACTGAGGTTTGTTTTGGCAA TTGCGAAGAATTTACGTTCTCTTTAGAAATTTTCTGGTCAGTAATATACA CATCCTTTTGTAAGTGTGATTCCTCCAAGCTCTCGTTCTGGTCAGTATTG TAGACATCCTTGAGCTCTGTGTTTGGAATCTCTGATTGACGAGTTCGATT ATGTGTGATCCGTGCAAAGTTCATGAAAATACTTCCAAGGATGAATGTAC CACCAGTAAAAACAAACATGTAATTTGCACTCAATAATTTCGCATCGTTC ATCGCACCTGTTgagaaaaatatattgaaaatgaaTGGTAGAGATTctca aaaagaaacaaaatctACCTAGAAAATGAAGATATCGGAAAGATTTTGAA GACTCgagaaatttcctaaaattttgcaagatTTTTTCGTGTCAGATATT ATTGACGAATTCCACTCAATTCTAAGAATGTTTATAAAAAGTAGTCACTA ATCCGGGAGGATCTATTAACCAGTGGCGATAAAAAGAACGGACGGAAACT CAAAAGTgagaaaaagaaatatattttgcAGAGAAgatttgtttctttta ttatttcaaCCAGCGACAAAAATTTGAGTGAACTTTTCCACTGGCAagaa tattttggccattttttctaGTGGGAAGGAGCCCAATCGTGTCTTTAGAA TAGAGGGTGTATAAAGGGAGTCTTTTTCAAACCCAGGGGGTTATTTGGCG AGTAACGGTACTGGTATGTGCCGCCCTCAAGGATACCTTTTTGGACCTGG CAGTCTCCGTAAGGtctggaaaaatcagaaaattaaatctGAGTCCAATT AAagatcggaaaaataggaaaattttcaatttctgccCCTAAATGCATTG AAATTTGGTCATTTGTCCCATTAAAGTACAATAAGGGTCGTATaattaac aaatatttccaattttttctcctCTTTAGTCCCTCTAAGGGTCCAAAGGT CACAAGTTGCACACCCCATCCTTTCTCAAACCTAATACCTACTGAGTTTT CAAATAGCAAATAAAAAGGCGAAAATTAACCATACCGATCAGTACAGGAC CAGCAATGCTTGGAATCCCATTGATCGTTTGTTGCATACCCCAAGCTGCT CCCAAATCAAGTGGACTTGTCAAATCAATCGTCACCAGACTGGCTAGTCC AATATTCGAACTATCAAAAATTCCATAAACACAACAATAGAGAAACAAAC TCCATGTATTGTCGGCAAAATAAGCTGCAATGCTGACCACTCCGCTTAAA AACATCGAGATTTGATATGTTGCCAATAATTTTTCTCGGTGATTTGCAAT AAAGCAGCCATAACAGATCCGACCAAACAAATTACTTCCAGACCATACAG CTAACATAAGACTAGCTGTTGAACTGCTTATTCCTATCGTCATTGCGTAT TTGATCTGAAATTGATACATTTATAGATTAATAAACCATTGTTGTATCGT TGtatcgttgtatttcgctgcagcttAAGCTTGCAATGGGCTCTATGTCT ATATGTACACTGCATACAATTGTGTTTCCAAACCACTTTCCcacggcaat ttctattttttataagaactctttatagATAAGCACTAGTCCCGCGTTCC TgtgacagacgcttgctagtctaatACATTTACAACCCAATTATATTTAA CCCCTAAACTATCCAAACTTGCAAAAATTTCTCACCGGGTCACTTATTTG ATTCGAGCTATTACCTATTAGGAAAGTGTTCAAATTTCTTGGAAGAAGGG ATCAAAAATTTaggatttcaaaatttaactCTAACGATAGGGAGAAAGTT TTACCAcatttgggcaaatttgagcAACAAATCGTATATTATGCAATCTT CTGTCCAAAACAAAGTTAAGTTTTATGGTAAATTTTGGTAAGACTAAAGA ACTTTATAACTTACCAAGTGAAACAGGGGGACGTAGGAAGACAAGATTGC AAAGAATCTGCATGCACAGAACAACCACAATGCGTTGTTCCTAAGTAAAT TCTTACGGAACTTGAATCCACAATCAATTTTATTCTTTTCCAATTTAGAT TCTATATCAACATCTTTTTTGATAAGCTTTTGGCTGAAGGGAAGATAACC AAAAGAGCATATAAATGTTATTCCCAGGAACATAATACCATAGAGATTCA TCGCAGACCTTAGGTTATAATTCTCCATGATTTTCTCCATCAGCGGGTTA AATATAAGCGACCCTATTGGAGCTCCAATCATCATAAAAGTTGTAGCTTG CGTTTGGTATTTGTCAAACCATCGTCCAACCATGACCAAAGTCGGTGTGT AAAGAAGGGCTAAACCAATGCCTAGCAAGACTCCAAACGATAAATAAAGA TGATAGATATTTTGAAGACGTGACGATATTATGAGTCCTGATCCGCACAT AATTGAACCGAGTATGGACATCGTGAAAACTCCAAGATAATTGCACGATA CTGATGCAGGCATTGCAAGTAACACCAATAAACCACTGGCCATTGAAACA ACCCAAGCTACATGaaaaaaagtaagtaaaaaAATTAAGGTCAAAGTAGC ATGGGCCCTAATATCCCTAATAACGATATTTTACACAATAACTCCGCAGC ATCAGCATTCTAGAGATGGGTGATGGCGTAAAATAAGACCTTCAGTAAAC AGTAATCCAGGATTTTCAGACattctttcgattgtttttacAGGCCGCCT CAGCTACCTAGAACTGAACGTGGGATATTGGAAAAAGTGGGGATTTGAGC ACCAATGCCTTGACCTAGTGGTCACTACTCTGATTAAAAAGGAGATCTTG ACTCCGCGCTCAAagctagacgatgctatcgtccgttagagggATAGCGC GGGAAAAGTTTACAGCCATGACGGTGGTTTACGAGAAAATAGAAGCAGTA GAGTTTAgaacactgtaaacacctccgcctCTGTTTACTCCATCCCATGC TAAACTCAATTTTCAAATCTATCCCGCCTCccgatttattttctttttca gtgacatggtgtagacgataggatcgtctagctCAACGCCTAATTTTCAT TGGCCATTCtgaattaacattttcaaacaaaaaaataaacgaTGACACTT ACCAGCTTGTTCttgattgcaattaaattcttccATGATTCTTGGCAGCC AAACACCGTAAGAAAACAACGTTCCAAATAACAAGAAATATATAGTAGAA GACATAACAAGCATAGGCCAGCAAAAACCTGCGTCAACGGTCGGTGATTT GAATCTTAACATGACGATAAATAGTTTTTTAATTGATGTTTCTAGAAATT AAAACGATATATATTTCccgtttataagaatatcaaacAGGGAGAAAATA ACCCTACATAGGGTTTACAGCTAATAATGGCGATAGCCTACCCATCTGCG GTATTCAAAAATAACTATCTCTGTCCGTCTTTGTGTATTACCACATACTA CTGGGCCACTTTAATCGTGTCATCAGTCTATAAAAAAGGCTTtgagtgga ccccgggctagatCTTTGCATTattaaatctttctttttgttttcatatt aGATCTGTgtttaatttccaaattcgttCATGTGTTTGGAGGGGAGTAGA ATAGATTGAGACATTTTTCAATTAAGTTTGGCGTTCACATATTTGGCTAA CCCATAatcagttttggggaaaatttagtcCCAACCGAAGGTATCCCCAA AACAAGACAATGGTTGCAGACCAGACCGCCGTCAAGGTTTCTGAGAGAAC CGAACCGCCATTCGAAATTCCCTCAAAGAAGTGACTCCCTTTGAGTAGGA CCGGACCTGAGACACTTTTAGGGTTGAAACCAGACCGCCGTCAAGGTTTC TGAGAGAACCGAACCGCCGTTCGAAATTCCCTCAAAGAAGTGACTCCCTT GAGTAGGACCCGACCTGAGACACTTTTAGGGTTGAAACCAGACCGCCGTC AAGGTTTCTGAGAGAACCGAACCGCCGTTCGAAATTCCCTCAAAGAAGTG ACTCCCTTGAGTAGGACCCGACCTGAGACACTTTTAGGGTTGAAACCAAG CCGCCGTCGAGGTAACCAGACCGCCGTCAAGGTTACCAGACGGCTGTCGA GGTTTCTGAGAGAACCGAACCGCCGTTACGAAATTCCCTCAAGAAGTGAC TCCCCTTAATAGGACCCGACCTGAGACACTTTTATGGTTGAAACCAAGCC GCCGCCGAGGTAACCAGACCACTGTCGAGGTTACCAGACGGCTGTCGAAG TTTCTGAGAGAACCGTACCGCCGTTCGAAATTCTCTCAAAGAAGTGACTC CCCTTAACTAGGACCCGACCTGGGAAATAAACACACATAACACACTCACA AAGCTCTCGTATTTATTGTAACATCTGGAGTGCCACTGGCCTAGCCTTTG AATTAACCAAGAACTAATTTCATGATTTTCCAAGATTCAATTTTACTGCA GAAAGAAGACTGATTTTGCAGTATGCGTAAATAAACGGAATTTTCCCTTA AACTTTCATTTTATGCCTGTTAATGTTGGTCGATGTTCTGTGTATACTTT GGTCTGGAATATTTCCAGAAAATTGTTAGCTCATCTTCTATGCCCAAGCT TTATTCAACTAAATTGTCaccctttaaaacaaaaacactgATTTCCTGGT TTACCATATATTATTCTACTTGAGTTGTATTGGCTTTTGTCAATCTTCTG CCTTGACTCGCCTTCTGTACATTTAAACCAGCCTcttctgaagaagaaaa atctaaatctagTTGATCAACAAATACTCTAGATACACTACTTGTCTGta taaaattttgattactTGTTGTTGACCGNGTAgatctaaaaagatattta accaTAGGGTGGCatgcttttaaaaatatttttgctaccTCAACTCTATC CGTATCAGGGGGTGTTATAgtcgtagcgagataccctgcaaaatttatgt atgagagcggtttttacggcactgtaattattgtctttgttttatcaaaa gataatgaatatgtcataaacgtctgcactccctcaaaAATTCTCGATAC GCCTATGCACGAGtacgttatatgataatatgatGATTTTTACAATTCCT CCCTTCCATNATAGTTTAACCTCTTAATGACCTTAATCCAAACCAAAAGG GGGCCTCAGTGCAAGATTATATTGTAAAATAGATGTAAAGGAGAGTATTT GAGCTCTGCCTGAGCCATGAATTCTTATCCTCTTGTCgaatctcaaaata aaatccacTCAGCTGAATTGAAGTTTCaaacatgtgttttttttttatga gtACTTTGTAATATCTATCTCTCCTTACACAAGAACATTTGTCAAAATGT CAAAGTGAACATGCCATGCAATATTTGAGAATAAGTTAAGTGGTCAGGTG TGAAAAGTTTTAGTTAGACCAAACTAACATGTAGTTCATCAGTTCCGTCT TCAAGAACGTTTTCGAAATATTAGAAACTAGGCTGACCCCAAAGCTGTAg atctaaaaagatatttaaccaTAGGGTGGCatgcttttaaaaatattttt gctaccTCAACTCTATCCGTATCAGGGGGTGTTATAgtcgtagcgagata ccctgcaaaatttatgtatgagagcggtttttacggcactgtaattattg tctttgttttatcaaaagataatgaatatgtcataaacgtctgcactccc tcaaaAATTCTCGATACGCCTATGCACGAGtacgttatatgataatatga tGATTTTTACAATTCCTCCCTTCCATTATTTTTGCGAACCgtggtgcagt ggtagagcatccgacTACGGTtcaggtcataccaaagatcctcaaaatgg tacttgatgcctttcTGCTCTGCTTGATGCCCAACATTTAAGAAAAGGAC CAAAGGTAAGTGAAGAAATCCAGTGAGAAAGAGTGACAAACTcctctacc ttcgggtagatataggtgtatcgaaagaggagccttcgggtcgcttCCGA cagcggtcgcagacttacttacttattttTGCTTATTCGCTTAGtgtcta ctatgtctgaattagtaaTCTAGTATAGCAGACTACATTTGTATGAAAAC CACTTTGACCATGAGACTTATGTATGAAAAAAGTCGTTTCAAACCCTACG TAGGAGATTCGTCTCTAGCTTTTGGCTCACCGATCAGAAAATTTTCATCG GGAGAATTTCTGTCTGCAAAAAAATAAACTATGACGCTTACCAGCTTGTT CTTGATTACAATTAAATTCTTCCATGATTCTTGGCAACCAAACACCGTAA GAATACAACGTTCCAAACAGGAGAAAATAGATTATCATTGAAGAAATAAA CATAGGCCAACATAGGCTTTTATCTACCGTTGGTGCTCTGAAACTTAACA TATTGAAAATATCCTCTTTTCGAAAATCTACGAAGAACAGTAAAATCAAA GAGTTTCTTGTTAAGGTTAAATTGCTCTAGGTATGAGGTCGACTTCAGGG TGATTAATGAGTGCCCTCACTGAATATGTATCATTTAATCAATCTTTGAC TCTAGTATATTTTTCTTATCTAACTTATGATATATTTCTACATTGAAACG GTAAATGTAANCTAGGTATGAGGTCGACTTCGGGGTGATTAATGAGTACC CTCACTGAATCATTTAATCAATCTTTGACTAGTATAATTTTTTGTCTGAC TTATGATATTTCTACATTGAGACGGTAAACCACATGTATGGAGAGGAAGA AAAGTCATTAAATAAATTCGTGTCTCCATAGCCTCCAATTATCAATGTAA AATCTTAATTGCCATAATTTTCAATTATGTAAGAATGAACACAGCTTGAA GCTGATAAATCTTTGGTGGAATTTTTAATGCCTTATACTCTTTTTGTCTT TTGGAATTCTATAATTGAATAAGGATTTTTGCTACCATAGCAGCTGaaca aaatgaacttttaaatattatattggTTACACATATCATTAATATGGAAA TACAAGCTGTTCATCTCAGATTCTTCTATAGAGACTTATTCTTATTATTG CTGACAGCTAAAATTCTCACCTTGTGTTTCGTAGATACAATCGTGGGCTT TTATGGGTAAACcaactcgggtaacttaatgcatgtcccaaattattcaa aatctgcttttcGTCTTCGCCCCGAATTCCAGCCcttaaaccataacaaa ttaggtatacatttttggaagcgtatttggatatAGAATGTTGGATTTGG TGATAcctaatttttttctcagcataattagagtttttgtaagaaaacct aattatgacgtcattattcatgacgtcataatttaaaaagttgaatatct caagaactaatgcTAATGAAATTTGcaccaatgatagaactcatcaagag taggagaaatgttttcaaaaaaattgaaaattagctgatgtcagcatttt attgcaaaaattcgaatttctgCAGTtgctgctgacgtcatcaatttttg gaAATACTTTGTACTTTNaagtgcatgacatgacctttcagtgggggcat ttaggatagtgaaagctatgactagtctAGAATTATCTCAATGTGCtcta tcactggtccaaatttcataaagttttgatttatatttcttgagatattc aacattttgtatttatgacgtcatcaatattatgacgtcataagcaggtt ttcttaagatatctctaattatactgagaaaaaatttaagtaacaccaaA TCCGATATTCTACATCCAATTACGCtcacaaaaatatataattttttatt gtttatgaACTGGAACTGGGggcgaaaaattaatgcaattttgGGACATG CAGTTACCCGACATGCATTAAGTCtcgcattaagttacccgagaagGCAT TCGGGTTAACATTGATGCGGTTTTCCAATAAAGATGATATACATCTATAC TATTGCCATCGCGGGATTTTGCGcacgtttttcagtattttagttccggt taaattgtgtaccggtaacattcttagcttgactgtattgtacttttccg gattttttttgatctgattacccattttcaaagctctatatgtctttttt tattacctcagggagtcgaattaagggaaattccttttttgttgggaaat tccctatttattaaccgctctgagcaacgcaaattagaaattttcatcct ttcaaaaacttgtcgtttgcatattacagtaaaatggcagtttagtacag tagcgtttagtatgatataaacaaaccataatataccattattttggtaa tattcggtgtttgaagaaaaaagtgacggtatttcggtgtcaaacatgcc atACGGTGACAAAATTaaggattttaccaaattttgctgtcggtgttgac ggtagtccaagaaatatgcgtaggtatttcggtgtctgtgacccccgtac gccccctcctaatatttgtagactaaattttgcttcagatgagatgccaT TCAAACTGAAGTAacggctatcagtaacatttctttccaaattcaaaaat ttatttgaccattcttctgcggtggcactttaatgaaaattatggctagt aaGACATTTAAATCGGAACTCTCTCATTCTGGCATGAAgcttttcgctag cgatttttaagcaTCTAGGAATTATTTCTGGCGCCTTTTCTGTATTGATC tttcaattggtcaattttcagcctcaaaaTGATAACTGTGAAAGtgtgta ttttttttctttttctaatcttcttatttgaacattttcaagagcgcttt gaaatttgattactcattcttttttccttttccaAATATCAAATTTCGTT CAAAgcctttcaaagtctttcaaggTCACCCTCGAATGTCCACCCTCGAA GGTCGTCCACCTTCGAATGTCCATTTAAAATGGCTAACCACGATAGCTGA GCAACTCCTGACTAACGAGCAAATGAGACTCTATTTCTTCATGGCATGAG TTATCTTTGGCAAATAGATAAAAATAACCAGACATTATCAAAATAAGCAA TAAATTATTACATCGAATTATACCGTTCATTGTTTGTCTAACCTTCCGTC GActaattatcattttaaaaACTAATGGTCTCTACTAGACCTTCCAATTA AAGTACACTATCGTTTGAAGTTATAAAGGTTCTTATATATGTATGTAAAA ATTGTACAAATTATCTATAATATTATAATACTGTATTATCGCATCTGCTG ACATCCCTGTTCGCAGCCCCAATGGGAATATAAATTTCTTACGAAagcta aatgaaaataaaatcaaagtcaatttctcagtgagAAATTTTACCagtgg gacgatattttggtcaaactTTTCCAAATGGGATGTCTGACAAGGGTTTG CTACTGGTTATGCAGGGGGTGTACCAGGTTTGCGAGACGAGCCAAAGTAC GAAAATAGAACCTGCGAGACACTAAATTCTTGACGTTTTTGTCACACTTA AAGAGACAGCTTCCCTAAGATTTcaagcaaaattttcaaattcaattcta gtccaaattaaaaaaaaattcatgatctTTTGAGGGagccgatttttttt ttcgtgattttggaacACTTACAGAGACTCGATTGCTTTTAAATGATTAT ACCCAATATGGCTCGTACTTACCCGGCGCCCAATTCGCCTAAGTATCCCC CCGTCGGTTACGCCCTGTCGAGTATAGAATATTCTTTACATTAATATAAA ATTCTTTGTGTTCAAATTAATATTCATTAAGTCCATATCGAAATCTTCAA TGCTgtgttctttattttcttttgatcatttgGTAGATTTCTTATCGCTC TTTTCAGTTTTCATTGGCATAGACAAAAGCTTTGTTATTAAAACAAATTC ATCAGACAATTTTCCCATTTTGTGTATCTTTAGAAAAATCAACTGAGGAC AATGACTCCTTTTCATTCCGGATAATATCAACATCGAAAGTTTTattatc aaatgaaaaattttccacTGAGGTTTGTTTTGGCAATTCCGAAGACTTTA CGTTCTCTTTAGAAATTTTCTGGTTAGTAATATACACATCCTTTTGTAAG TGTGATTCGTCCAAGCTCTCGTTCTGGTCAGTATTGTAGACATCCTTGAG CTCTGTGTTTGGAATCTCTGATTGACGAGTTCGATTATGTGTGATCCGTG CAAAGTTCATGAAAATACTTCCAAGGATGAATGTACCACCAGTAAAAACA AACATGTAATTTGCACTCAATAATTTCGCATCGTTCATCGCACCTGTTga gaaaaatatattgaaaatgaaTGGTAGAGATTctcaaaaagaaacaaaat ctACCTAGAAAATGAAGATGTCGGAAAGATTTTGAAGACTCgagaaattt tctaaaattttgcaagATTTTTTCGTGTCAGATATTATTGACGAATTCCA CTCAATTCTAAGAATGTTTATAAAAAGTAGTCACTAATCCGGGGGGATCT ATTAACCAGTGGCGATAAAAAGAACGGACGGAAACTCAAAAGTGAGAAAA AGCACTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002254TCONS_00002254Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:528105..539762 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0 0 0 12.11 8.32 4.65 3.77 0 0.19 0 0 0.12 0.02 0.01 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0