XLOC_001092 (gene) - C. hemisphaerica

Overview
NameXLOC_001092
Unique NameXLOC_001092
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:844239..850717+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001092 ID=XLOC_001092|Name=XLOC_001092|organism=Clytia hemisphaerica|type=gene|length=6479bp|location=Sequence derived from alignment at sc0000018:844239..850717+ (Clytia hemisphaerica)
ttttactaaacaaacaaacttataATGTCTAGCAGAATAGCAATAGCAAA
AAGAGTGCATTGCATCATAACAAACAATTGTGTCCTTGCATGTAAACCGA
ATTTATACTTGTCTTTTAGAGTGAATTCATTTTAAGTGCATTCGTGCACA
TAGTTAGAAGGGTAAAGAATTACCCAAACTGGGAGATTGGAGATTTCACA
CAAAATGGAGCTTAAAATCTATCCATGTATTGGGCAGATCTCGATTTTAG
TTCTTCTTTTTTGGGCACAATCAGTGCACGGTCATGGAGCTATGGTCAAA
CCAACGAACTGGCTAGATTTTGAAACACGAATTCAATTAGACAATGGCTC
GTGGTTTACAGGTTTTGCTGGTATGAAAACACGTTTACAGTGTAAACCAG
GCCTAACGATCCCAAGGAAGATCATCTGCAAAGAAAACAATGATTGTGAA
GGTTATGCGTTTCCTGGTCCCATCTGTAACTGGTTCACAAATGAAACATG
GATACACACGCCCACACTTTTTGATCCCGCCCTTCGTACCTTCAGTCGCG
TTAGAGACGAAAGTAAAGTGTTGTACACACCCTGGCGGGCACCAGGAGCC
GCCCCGATTTACAGCCCTTGTGGTGTATCCGGTGGTAACCCGAATGGTTG
CGGTGCACTGAAATGTGGGCAGAAGACCGGCGGTTACGGTCACGGTCAGA
GAGCAAAGGATGTTGAATTCGTGCATAATATTTCTGTTACGACATGGAAA
CGAGGCCAAGAGGTTGAGGTAAAAGCACACAAAGTTGACtgcttgttttt
ctttacacaaataaaaattaattaacttttttagtcGTGCTTTTTGTCTA
AAAGATACCGAATTCCATTCTCATCCAAACGAACGATGATTAATctaaaa
tttaatcatttttaattgCAGGTGGCTTGGGCGATCTATGTGAATCATGG
CGGAGGTTACTCTTATCGGCTGTGTAAAATGCCAAAAGAAGGACGACCAG
GTTAGCAATATTGTTTTATTGTAAGGTTTGAGAATTAAAAGCCGTAAAGA
GATTCTATGGAAACAACACTAATGATATCCTAAAAGTCCTTAAAAATAAA
CGGTTTGTGATCTTACAGTTAGATTGTTGTATCTTTAAAAATCCTTTTTG
GCTGCTTTACATAATGAAGAAAAAGCTTCAACTGAGAGTTTGGCATAGTG
ATTTATTATTACTGTTTACACTgtctgcaccccaaaatgttggtaaattt
tgtttttcttctgacGCGAAAGAAAAGCTTTGGAAAGGAAAAAATGGACT
TGTTACAACTTATTTACCCCCATAAGAATCTTTCCTGTTGCATTATTCAT
TCTCAAAGTTTTTCAGATGATCAATATacaagtttgaaatttcatatttt
tacgtcactgcaccccaaaatgtaggttcACTTTTTCATTCATAACTTTC
TAAAAAATCGACCAATATTCATGGTTTTTGGTACGAAAGTGTCTGATAGG
ATTGCGAAACGATATACCTTCTTGGAATCGGTAAAGGTAGGAAAATGTTT
GCTAAAACcgaaaaaaatctatttttgcaccccaaaatgtaggtaAATTG
CAGATCAAATAACGACGATAACGTCAAGTTTTTGGTTATCTGGCGTAAAC
CTAGCGTAAGCTGAGgtaaaaagaagtcattgtaatgCACTTTCTATTTT
TGGGTTCAAACGTTAGTGCACTTGCACGATTTCAAGGAGGaaagtcaaga
aaatgactAAGAAAAACTTCACCTTGAAACTACAATGCAATGGTGTAATG
GTGTAGGACTTATCTCTTGATGGTGAAGAACTAGGGGCTCGGAAACCCTA
AACTTGATAGTAATTTATCTCTTTTTTTCGGAAATACCCTCGGTTGATGG
GGAAAATGGGCAAATCAAGGGAATAATCAACATTAAAATTAATCACAAAC
TTATAGGCTATCCATTACAAAAGTTTTCGGGCAATACACATACTGAATAA
ATTTTAGTGAACGTCAAACTAAAATcctacattttggggtgcagacAGTG
TAGATATCATGAAAGTAATTGATCAAGGGTACGATGGCCCGGAGATGTCA
CTGTTTCGTCACAAAAATTCTTagtttcatcacaaaattttttggtttCA
TCATAAAAATTCTTggtttcatcacaaaatttttagtttcgtcacaaaaa
ttcttagtttcatcacaaaaatttttagtttcatcacaaaattttttagt
TTCATCACAATTTTTCAGTGTTTCATCACAGATTTTCAGTGTTTCGTCAC
AAATTTACAGGACTTTTCAGTGTTTCattattaatatatttttttatgaa
actaaaaaaaactttttttcttgtggcGGTAGGATCAGGCGAAAACTGGA
TCAGTCACAAGATCCTGTTTTCATATTATTTTGCGaaaaagaaatacaaa
gaaaactGAGAAGCTCGTTTTTCATAGGAATTAGTTTTCAGGAATCAGCA
CATCTCTCTGGTCagccaaaagatttttttctcgccatttaatttcgcga
attaaggggtcattcgcaaaattttctNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAACAAGAAAAGGGTGGTGGA
CACTACTACACCTAAGAGAACGAATAAATTCGTTTGCATCAGATTAAGAG
aattataaatttgaaaaccgagtcgaaaagcttaaaatcatgtATCATGG
GATGTTGACTTATCTTGGTAACTGCGTTCTGAAAAGGaggcctgaaatat
ttttcaatatctcAAGAAATGAGTATCGAAGAGTATCGCAGTGGGAAAAT
ACTAATCACGTTTTCATCAACACCCTTAGATCGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATTAATAATGAAACACTGAAAGTTTCGTGATGAAACACT
GAAAAGTCCTGGAAAGTTGTGACGAAACACTGAAATTCtgtgatgaaact
aaaaatttcatATGACAAAACTAAAAACTTTGTGACGAAACTAAGAACTT
Ctgtgatgaaactaaaaattttatgtgacgaaactaaaaatattgtgatg
aaactaaaaatttcatATGACAAAACTAAAAACTTTGTGACGAAACTAAG
AACTTCtgtgatgaaactaaaaattttatgtgacgaaactaaaaatattg
TGATGAAACTAAAGATTTTGTGATAAAACACTGAAATTTTGTGACGAAAC
AGTGACATCTCAGGGCCATCGTACAAGGGTGAATTAAATTTTGTCAGTAA
ATGAGTAATCGACTTTTAAGACTCGAGCCTCTATGTGTGAGAGTAAATAA
CAATACAAGGCTATCAGCTGAAGGTGTTTCTTCTTTAAGTAAGTATgtcg
aaaaaaatataaaaaagtttaaagagaGGATAAGCAGACTGTCTTTGGAg
caattttaccattttgttaTTTATATTTTGGATATTAGGTTTGACGGAGG
AATGTTTTCAGAAGACTTCTCTCCAATTCGTGGGTGATCATCAATGGATA
CAATGGGGTGAGGACGAAACGTCTAGGAGGGAGATAGCAGCAGTCCGAAC
AAACAACGGTACCTTCCCTCCTAAATCACAATGGACCAAAAACCCAATCC
CGGCGTGCGTGGGTCAAACAGGCGGCTTCTTAGACCCGCACCAATGTCTA
ATGGGTACGCAATTTCCCGCTCCAGGACCAGGCTTGAGTGGATTTGGGAT
CAATTTGTACggaacggagaaaatttttcccTTCTCGATTGTTGATTTAG
TGAAGGTGCCTGAGAATTTGGACGTTGGAGAATATGTGTTGTCGTTCAGA
TGGGATACTGAACAAGGACATCAAGTGTGGAACACATGTGCTTCAATTCG
TGTCGAATAATAAAATGTTGTCATATTTATGTTAATTGACGATTTAAATT
TAGAGTCTGAATTCACTTCCAATGATAAAGTTTATGGCGAGCTCGCAATA
TAAGCAGACCTGAATTCGTCGGGTTTTCGTGtcgtcaaaatcgaaaaaga
cGGACTTTTCATGTCTCAAACTTCTCCGAAGGAAACAAACGTATTCCTAA
GCTTTCTGTGTTGTCCCAATCGAATTTGTTTGTTCCATAAGCCAAGTGAT
TTGCACTTTGCTCGAACCCGGAACTTTAGATCAAGAGTTAAGCACGCTTC
AACTCGAATACCGCTGCTTTTTTATTAATCATACAAATCTGAGGTTCCAA
CCAAACTTACATATAGGAAACAATTACATGgtctaaatcatatttctgaG
AATGACTTacaaaaatatatcttttattagaaacttgtgaaTCGAGATGA
GACGTGATCACTTCGCAGATTTTACATATTATACCTAAAGGGAACGAATT
TTGGCGAGCAGCAAAAATCCTAAATAGTTTTGAATTTGCCGAGGAACTCA
ACTTGCAAAGAcgaaattttgtttattttgacgaaaattaatTTACTTTA
CAAAAGCactttaattttcgaaaataaattcccttaaggtatgtaacttt
taatatataataaataaaattttgctAACCAATATGAAAAGGTAATTTCT
TACTTAAAACAAAACTTATGAATACATTTATATGCAATAAATTAATGATT
AGGTGAGAATCCTTTGTTATGTACAATGAaaaactaccgggtgcgccaat
gataacaaaaaatttcctaTTATCTGTAAACATTATACATAATTAGACAG
TATGGTTTTGTCATGACTCAAAATAAAGTCATGAACCTTTTTATAcagaa
atactaaaaaaatacTATACTAAAGTACTTTAGTTTTCTAAAATAAGTTC
CCTTCAAGGTATGTAACTTTtaatatataataaataaaattttgctAACT
AATATGAAGGTAATTTCTTACTTAAAACAAAACTTATGAATACATTTACA
TGCAATAAATTAATGATAAGGTGTTATTTGTTATGTACAATGAAAAACTA
CCAGGTGTGCcaataataacaaaaaatttcctatatcTTACCGGCTCTTT
TTatgccggcccttattggcgttatttttgggaaggtggcgtaaaaaggg
cctaTAAGGTATCTGTAAACATTATACGCAGTTGTTGCGTTTATTGTCAT
GAttcacaaaaaagtcataaaacatttttttccgaatATATACAGAAAAG
AACAAAATCTCGTTTACAACCAGAATCAGTCATTTTGAAGAAAGAATTTA
ATGTTAATAGGAATTTTTTGATCGCATGTTTGGTTTTGATGCAATTTTTG
GATATATTTTAATAAGTTGCTAGTATTGATTTGCTATTTTCCAggaatat
tttaaaacaaaagtgaatATTGTTCAAATGACGACACTTTTACGTAAGGC
CTAATTGCGACGATATCCGAAATTTCTACTAATATTGTCAAATGAAACTT
AAATTATTAATAAGACTTATTTTTGGTGAGGCAAACACAATTTACATTGT
TTTAACCTTCTTTCGtgaaacaaacttttaaaagtgTCGAAGGTCGAAAG
CCTTAGGGGCTaccaaaaatttcatgaatcATTGGGGCAgtttttttgcc
tgggacctaaacctaGGCTGACGCTGACGTTttacttttctaaaaaattt
ttctcgcttgaaaaataaaagtaataaaaccAAATCAAATTAAACGGAAT
CACAAAACTGCGCCATAAATCCAAATTTCTTGGAAGTTTAACGCGTTGTG
ACCGACCACTTGTGGTTGCTCAGCATAAATTCCATCAGCCTGTCTCATAC
ATGAAAAGATTCTGCGTACCCCCATGTCTCCTGTATTCGCAAACCATGTC
ATGGTGGTCTGCTCGTTGACGGCTAGTATGGTCTTCAGATCAATTAGATC
ACTTCGTTGCGCATATTGAGGGTATAAGATATAATCGTGACGATTCACAA
ACACAACATAGTCGATGAACACACGATTGTTGAATTCCGCCTAAATAGAC
AGAAATGAACAAAATTGACAGAACACAGTATTTGAAAACGTTCTCTCGTT
ATCTTCACCACAAAACTGTTCATTTCTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002079TCONS_00002079Clytia hemisphaericatranscript
TCONS_00002080TCONS_00002080Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002080-proteinTCONS_00002080-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:844239..850717 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15	0.1	0.17	0.03	0.65	0.4	4.17	5	2.51	2.5	2.36	2.33	18.53	20.18	25.56	31.8	9.96	8.49	13.16	10.7	1.16	1.29	2.91	3.66	1.47	0.77	0.28	0.15	0.61	0.59