XLOC_000996 (gene) - C. hemisphaerica

Overview
NameXLOC_000996
Unique NameXLOC_000996
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:258311..268179-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000996 ID=XLOC_000996|Name=XLOC_000996|organism=Clytia hemisphaerica|type=gene|length=9869bp|location=Sequence derived from alignment at sc0000012:258311..268179- (Clytia hemisphaerica)
TGTAGTTTCTTGTTGTTTCTTTCAATCAATTGTTGTTTCGAACCAGCTCG GTAAAACGGTATGTAAATTTTGGTCAATTCTTGATTACTATCTAAAATAA AGTTATAATCGTAAATAGCTATTATTTTCAAGTTGATAATTGATGATTGA TTATATTTCAAGTTTCACATTAGAAGCTCTTCTGAACTATTGATCCTTTG GTCAATTACCGTACGATTCTTCTACTTTCTTGTTCCCGGGAACACTTTCC AGTACTCTTCTTTCAATCCAAGTTGAAAAAGTTGAATGAATTGAAGTACT CAAAGCAAGTGACTTACCGTAATTGCGGTCAATCTTGCTACACTTTGTTC GCTTATACTATAATTTCCGGTCGAGTGCTCCCCCAGATCGTTAGTCACCC GACTATGTTTCCGATAAACTTTGACAAAATCTGAAGGTATAAAAGAGTCC CCAATAGTCTTTAGCTCCAAACTAATCAGAGCTTTAAAGCATCTCCAGAT TCAAAACGCGGACCATAAAACCTTTTCTTTTTTTTAAGAAACCCATAAAA TTCTTTCACGGCAATGAAAAGTTTTTTTCGTTTATTTCAGCAACCGATAA CAGCTATCATTGACAATGCTGAACAAATTCAAGAATCGTACGAAATTATC CAAGTGACCAATACAACTAAAGAACTTCCTACATTTTTCTGTCATTCAAA CATCTTATCAAAGAATATTTCCTGGAAACCTTGCAACAAAGTTGCTTTGG AAGAGCAATCTCATAAAATAAAAGAAGTTGGACCAGGACTTTATCTAGAG TTTAAGAAACATGCGAGTCCAGGAAGATATTGTTTTGAATGTGAAGTAAA TAAGGATGGTGTTGTGGCTACTAAAAACATAAGCGTTCTATTAAAAGGTT AGTACGTGTCTTACTGTCGTTTTGCTTGATTTCTATTCTCAAAAGTAAAA CTCTACTGGCCTACAAAAAAAGACAATGACTCCGGCTAGTGGAGGAGAAC TTAGTAAAATAAAAAAAAATAAAAAAAATAGTCAGTCTCGTAGTTGAGCA CAGAATTTTCTTTAAACTTCTTGAAGAAGCCTTCTACTACTTTGAGCAGG CTCTCAGACAAAAGTATATGAAGCGTTCCGGGAAAGATAATTGCTTATGA TAATATACCCATAGAGCGCAGTCCTTTTATATTATTTTTTAATTTTCTGT TACTGAATGTCAAACACACTCAAAACCAAACATAAAAAAGTGAAACCTAT TTCAGCTTTGAGTGCTAGACAAGTGGCAAGTCTTTCTAGAATGTATAGTT TTAACCAGTACGCCACCATTCAAATTATAGTTTTTGAATATTTCTTTCAG ATTCATTCTGTGGCACTCCAACAAGAGAACAGGCGTTGAAACATTTTCAT GGTTTGTGAACGATTCTGATTTTTGTTACCCTGAGAGAGATTTTGGAATG TTGAAAAGCTACAATCCATTGACACACACCTGTGTCACAGACCCGCTGGG ACCCCAGCAACACTGGAAAATTTGACCAGAATTTTGTCTCCGGTGGGAAA AATACCCTGCATTTTCAACCCCACTGGAAAATAGACATTGATTTCGTCCC CATTTCAAATTCAATAGAAAAAATTGCACTCTAAAATCATCCCTACTGAA ATCTTTTACCTGAAAACAATGGAATTTATATACCTTCTTGGATTAGAACT TTCCATCCCCATGTGGGAAGAAATTTCACCGGGGCTGTGAGACAGGGGTG TATTCACGAAATTCATTTTTTCACTGTAAATTACAACAAATTTTCTCAAC GAGTTCATCCAAAAATTAATGGGTGAATTATTTTTCCGCAAATTATAGCT CGAAAGAAAGGTCAAGTATTCAAGCAATACATCCAATGTCCAAGAATGAA CATTGAGAATCTTCATCTCCGTGACTTCATGGATAAATATGGTCGAACTA ATTTCATGTTATCCTGGACAAAGATAGACAAATTTCATGGTAAATTAATT ATTGAATTATTAAAATTTAACAAGCGCGACAATTCCATTTCCATCTTAGG GGTGAGTTAAAAAAATGTGTTGCTTTAAAAGATTTATAGCCGTGTCAAAT GATAAGTATATATATAAGTCGGATGGTACAGTAGTCCCGTCGTATCACAA ACTTAGTTACGGGGTACTACTAATAACAGACGATGTCGGCTTAAGGGCTC TGGTCATAGTGAAAAATCAATTTCAGAATTTTAAGATAAAACCTTATGTT TTCGCTTCTTTGACATGTTTAAGAACAAACTGCTTTTGAAAAAATTAATC TAAGTAATTACATCATGAGTAATTAAGGAATAAGTGTGGCATGGACCTTA ATAAAACGATATAACGACGCTATTCATATACTTTTCACAAAAAAAGCCTA ATCTCCTTGGGGAAATCATTGGCTACATCCCAAGTTATAGCTGTTTTCGT ATTGAAATTTAGTGGCGAAAATTGCCAAAAATGAGGTTTTTTGGAGATTT TAAAGAAAAGATACTTCCACAAAAATTTTCCGAAATTGTATTTTTAGGTG CTAAATAGTAACATCGCCTGAACCAAAAGAAATTCCAAAATGTTTGATTT TCACCGAGATTAGGGCTTTGAAAGGTGAAATACTCTTCTTCGAAAAACTC TTCATTTTCTTCTTCATTTACTTTTTTCATTTCAATTTTTTCGATTTTTA AATTCTAAAAAGGTAGGTTTAACATATAAAAAAAGTTGTACATTATTCTT TTTAAAATGCAGAAATTGCAATTTAAGTTGGTGTAAAATCGAAAAATTGG GTATGTCCAGAGCCCTTAACATGAAAACTCAGATTTGACCTCCGAAAATT GCCCACAATGCTTTGCGCAGAAAAAAGTTCACGGTGAAATTTTTTACGCA CAAAGCATTGTGGGGAATACTCGGGGGTCAAATCTGAGTTTTCATGCGAA GCCGATATCGTCTATTTGAAAGTTGATGTTGAATCCCATTTACAGTCGAC GTTCTCTTTATTCGATAATTATTTGTTCGACAAGTTTCCGTTTTCGATGA AATTCAAAATCACCGTCGAATTTTCTTAAGAAACTCTGCTTTTCGATAGG CTCCTTTTTTCGATAAACCTCCCTGAAAGTTTCCGATACCTAACCTGTAG AAAACTCTTTCAGAATGATTTTTGAAAATAAAGATTTAAACTTTTATGCG TTCAAGTTAAAATTTTGAAATTCCATTCCTCAACATTTTTCAGCGAGACC TTCAATATTTGACCTGACAATCAAAACATTTGAATCTGACTTCTATTCTT CTTCCTCAGTTTTATGATTCACTGATAATCTGATGTGTATTGGAATTTTT ATAGATGAGAATCAATTGTATGGTTTCAAGTTGACCATCGACCTTGATGG CCATGGCTTTTCGTTCTCTATGTACACAAAATATGGTTTTAACAAGCAAC TGGTAAGACCTGTGAAATGGAGTATTGTATCGTTTGAGTATTTTTCTTTA TTCGAACTTTAACTTCTAATTTGCAAAATTTATGGAGAAGGGTTTAGACA AGATGGCTTGGAGACGTATTGTGTAAGTTTTAGCCTCAAATATTGGCTAG CCCCTTATAAATATAAGTTTTGGGGTAAAATTGTCCCCACCTATACAATC ATATTTTTTATTTATAAGGGCTGCCTGCAACCATAACTGTAGGGCGGGAG GGTGGTAAAAAAGATTCTCATTTAGCTTCAAATCCATCGCTGACGGATCG AATGAGCCCATCTTTTGGTTCACTTCTGCTATTATGAATATAATATAGAC CCGAAGCAATGACATTTAGACAAAAAGGGTGGAAGGCGGCCGCCCATTCG CCAGGTCTTGGCCTTGAGTTGGTTATTAGCTTAAATTGCAGTTAAATTAC AATCTAACGGGTTAAATAGACATTGCTCCACTTTATAGACAAAGTTTTTT TAGATTTAAACACCTTCTTTGCATAATTTCTAAAAATTAGTTTGAAGAAA ATAAACTTTGGGTATTGAGTTATTCAAATTTACCTGATATTTCGAATTTT GAGACGAAAGAAAGGGCTTTTTTTCGTTCGAAAACCAGAACTTTCTTCGA TCAAACTATAATCTGAAAACATCCTTAGCAAGACAGGTTTGGCTCTGAAG TATGAGTTCGTAAGATTTCTTTCGATATTACGCTAATTTTTACGCGTTGA TTTTTTTATCTTCGCTGGAATAAGATTGTCCTGCAGTGAACTTGTGAATT ATAGTTATACATCAGTTCTTTTCGCCACAAATTCTTCTTTTTATAAGCGA CCACGTTTCTAAGACTCGAGCTTTTGTACTTTTCCGTTTAAGCAAGCTTT TCAAATAGTCTATTATTATGACAAATGATAGAACTTGACCCAATAGGCAT AAATATTGTATAAATAAAAGGAGTGGTTCAAGCAAGTTTCTCCGAAATTG AGCTGGATTGTTAAGGACTCCAATCATGAGTCATCAAAGTCGAATCTGCT TATAAAGAAAAAAATGTGTATTCTCAAATATTATTATTTTTTAGAAAATC AAAAAATCAACAAAGACTATGAGAGGTCATGTGACTCCAATCACAAACTA TTCAGTACCCCTGACCGTCTTTGGATCCTTTTGGATCAACCACAAACGAC AAATCAGAGGTCACACCACAAGCTATAAGATGAACATCGATTTCCAAGCA TTACCGAATTCTAATGAACTTACTGCCAAAGTCCATTTTCGATCTCGTGA AGGTGAGCCAAGGGTGATGTCAACCTTTTTTGTATCTTACTATCATTTCA TAATCCAAGCGAATAAATTTGATGAAGCATTTTCTGTTATATTAGGGAGT GTAAGGGGGTCATGAACATTAGGTTTTTGAGTCAAAGTTAGAAAATTTCA AGGTACTTGCGACCCTTTTAGCGACTAGTTTTTGCTCAAAATTACCAGAT TTTAAGACCTTTTGAAGGAGTTCGATATTTCGTAATTTTGGGACCCTTTC ATAGATTTGTAATTTATCGTTTTTGTACCCCTTTGAGAGACTGCTTATGT CAATATTTTCGTCATCTTTCGTGACTTCATCAGCATCTGCATTGCACTTT TTATACTTTAGTGTTATGTGACGAATATGCTGAATCTCATAATGGCTCGT ACCCAACCTCGTGTTGTAAGTACAGTCTTTCTCTATCTCGAACCTCTGGA ATTCGAATTTCTCTATAATTCGAACAAAGACTTTGGTTCCTATGGCATGA AAGTAGCTTAATACTACTCAAATCTTCCCTATTTCGAATAATTTCTTGGT CACTTTGAAGATCGAATTAAAAAGAGTTAATTGAGAGATTTTAATTTTTT AAATTTCCAGTATTCTGGCAAACCCAGTGTTTACTTAGTGCCAGACCTGT CTCATCTGATACTTATTAGAAAGGCAGTAACCTTTCTAGATGCCTTTCGA CCTAACAAACTCACATATGTACGCAAAATGATAACAAAACAGATCTAAGC GCTGCACAAAAACGCCTATTCACAACGCCCGAAAATCGGAGTGCTTTTTC AACCCAGTTTTATTCTCAAATATTTGACCTGTGTGATCAGTATCAATTTC CGATCAATTGATATAATGATAAGCTCACATTCAAAGTGAGAGATTTTCAA CTTTTGCCTTGGTGAGTTTTTGGAGGCCATATTGTCAAAAGTCCATCACT ATGGATTTCCTCCCGTGACAAATAACGACACCTTGATTTTCTGACTCCCT AAGGGTCATATAAACATATGATCAGAAGAGAAGATAACAATACGCGGATG TGCATACGGGAAGTAACTGAGCCCCCGGAGTACAGAGAGAAGTCGGTAAT TGGCTCTCAAATTTTAAATCTCTATAAAGTGTTAAAAAGGCTTGAACCGC GATATCATACAAGTCCTTTAAGTTGTTTGATATGTACAAAACTCGATCAA CTTTTTGATCGAGCTAGTTTAATTTTTATATCCACAGATCCATTCAAGAA TTTAAGAATAACTGGTATGTGCCGAAGATATAATTACAACACAATTGGTT TGTTTGATTTTATCTACACCAACAAAAGCAATTTGTACCTCCATTGGGAA GCGAATCGAAATGTGACACTTGTAGGCAAAGCGGATAGTGGTCAAATGAA TATGACTCATTTCAGATTAAAAACTGAAACTTGGATAAAGCATATATTAC CATGGGTAAGTTCGAACTTTTCTCAAACTCGAACCAAGTCCCTTAAGTCG CCCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGA CGTTGTGTACGTTAGATGAACGTAAAAACAACGTTGTGTGCCAGCTGGGG CTTCTTTGTGATCTCTTTTGTCGAGCACTTTCCAAAATCCTGTCGTTAAT ATACACTTCTTTTGAGCTATATAAGCTACGGGAAAATAATGCATTAAAGT TTGGTACTTGCTTCAACTCGACTTATCAAAAGCGTGTCTTAAATACTTTT TGACGACTCTTTCAATTATTTCAGAGTCATGGAAAATTTAAATTGATTCC CAGGAAAGACATTGGTGGTGAACCTCCTTTCGGATACATTGAGGTGAGAA TGTTCGATCATCATTAGCCAATTTCATAGGATTATCAATTACATGATAAC ACCCCTGTCTCAAAGCCCCGGTGGAAATTTTTCCCACAGTGGGGATAAAA ACTTCTATCTAAATCCCAATTGGGATAAAAATTCTATTGTCCCCGAGCTT AAAATATCCAGTGATATGATGGTTTTGGGCAGCAAATTTTTGTATTGAAT TTCGAATGGGGCTGAAATTGTGGCAATATTTGTCAGTGTGGCTGTGGTCC CAGCGGGTCTGTGACACAGGGGTGTATGACATTTTTCTACGTCATTGCAG TAATCAATTTTTTATTGTTGAGCACTCTTTTGCAAATTTAGATTATAATT GGCACAAAAATAAATTCCCTGTAAGATTTTAAGAACCGCAACTTTAGTTT AGGGTGATGATCCAAAAGCTTGTGCTGAAATCGAAACATCCGGTTATATA AAGTCGAAAATCTGAAAATGTTGCTCTCGCCCGAACTTTAAATTCTGTGA AGCGCTAAAATACCAAGAATCGCCAACATATTCTGACCACCATGATATAT AATTCAAACCAATGTTCATATGACGTCTCTTTTCCGTTCACAGCGGATGA AACACCTACTGTTGAGGATATTTTTATTTGATTATTTTCAGCGAGGACAA AAATTAGAGTAAAATTTTCTTCTAGGAACGATATTTTGACCAATATTTCT AGTAGGAGGTAGTCCAACCGGGTCTGTGAGGAGGGGGTGTTCTAATATTT GAAAAAAATATTTTTGTTTTTCTAGCTGATCAATTTTCAAAATGGTGACG AAGACAAGATACTACTTACGACACATGTGGTACCTGAAAATTGCACACGA CCAACAACCACACCCACAACCACACCCACAACCACACCCATCACTTCAAA ACAAATCAGTACTACTACTTTGATTTTGATCATTGTCACACTTTGCACAA TCATAATTCTTATTTCACTAACCATGATTTTAGCTTGTCGGCGAATGAGA CGAATTCTGAAGAAATCCATTCAACTACATTTTGGAAAAAATCTTGATCC ATCTTTTGAAAAAGAAATGGAAAATTATGGTGATTAATTACATAAACCTT TTAAACCATTTCCCCCATCATTTCATGATATGCCTCCCTTATAAGCTAAG AAATCATTTCTCTGACTCCCAAGTCTCCCAAGTGTGTAACAGTAATAACC CAATAATTAATCAATTTTCAATCCTTTACCAATTCCTAATTCACAGAAAA ATCTGAATGTTATCTTTTTCATTGAATCTGTACTAAGTTTGTTATTTGTG ATTTGATTGGCACAACTTTATTCATCCAAGATCTTGGATGATGACTGCCA TAGCTATATCTGTATTCTCTGAGTGCATGTTGAATAGAATTGGGTTTGTC TTCACGGTGACATTTCATAAAGTATTTAAAATAGAAAGTGTATATTCTTC TCTTTCCAGAAACAATGGAGATGGTTGAAGAAATTCCTTCAGTGATGCTG GTCCACCCACATGGTTGCATTGAAATGGAGAATCTTGCTGTTTTCTTGGC ATCCCAACTTAATACATTCGGTGTTCACGTTTATTCCGACATCTTACAAA CGCAGAAAATTGCTAATGAAGGGTTGTGTCAGGTTTTGATGGAGAATTTT CAAATAGCAGACTATGTTGCTATACTTTGCATGGAAGGTATGCTGTGCTA ACAATGTTCTTTCAACGTATTATCTGGACGTTCGATTGACGTTGTTTGAA TATCTTGTATTATTAGCCAAAATATTCTGCAAAATAACTTTCATTCAAAC TTTGGGAGCATGAGTAAGGCACTAGTCACTTCTCATAGTTTCTGATTGAT TGATTAAAATCATTAAAGATATTTTGGAATCTAGTCCCTACACCTTCCGC GTCTAGTTTTAAAAATCTTGTCTCCGTCCTAAAAAATCAGTCACTTTTCC AAAAAATTAATTCGACCTTTAAATGATTTATTTATTTCAGTATATAATCT GCCGTGCCATCAACCATATCAATTCGTATTAAATCAGCTCGTATCAAATG AATTTGTTTACAAGAAATCATCCACAAACAACAAAAACACAGACCAGAAT GTTAACCGGTTTATCGCTTTACATTGTACAAACACAGAAGCCATTCCTTC ATACCTCGTTCCAAGATCTTACAGCATTCCACGACAATTTTCAGGATTTG TTCAAAACATCTTCGGTATCAAAACGTATTTCTCGTATTTCTATGATAAG ATTTTCGAACAGAACGTACCCGAATTTAAAGAGCGTAAAGAACACCTTCA GATGTTGGCAGAGAAAATAAAGACACAAATTCACGTCAATTGCTATGCAT CCACGTGCTCAAAGGTAAAAAATTTATGAAGTTTGAGTACTAATCTTATA CAAAAATACTCTGTCCTAGCGCCATCTTTACGAGTAGATCGTATTTCGAT ACCGGCAATTTGTTCACCTAAGACCATTCGCTCGTCTCCTCATTTACTAC CATGTCAGATGTTTGTTCTGACTAAACAAATTGCCGGTCCCAAACTGTAA TGTACTACTGTAGTCTACTCAGCAAAAAAGGTGCATCTATTTTGCTTCAG GGGCCGCCATGGCTTGAAAAAGAAAGCGTAGCCCTATCTAGTGTTTCAAA TAAGCTATCTGTGTATTCCAGTGTATCTAATTTTCAAATTTCATCAAATT TCCCGAATCTGTGCGAAAAAATAGAGCTCATCCCCATCCCCGCCACCTCT AGCTACCTTCCTGTTTCATTTTCTGAATTAATTAAAATTACATTCTTTTT AGGGGACTTTATGTGAAGACGTTGTACCAATCGACCATTCGAATCTCGAT GATGGTGAAGAGGATGTTATTCCAACGGGAGAAGAAAACGAAGAGTTAGA AGATTCAAAAGAGACAGATTCTTTGTTTAGTTATGCGTCGACCAATGAGG ATACGACGACAAATATTAACGATGATAACAAACACGATACTAATACCACC CAAAATAATAATTATGAACAGAATGTTTCAGAAAAGAAAGCAAAAGAACG GAAAGTAACATTTGCTGATGAGCTTGACGACGAAGCTTCNCCAAAATAAT AATTATGAACAGAATGTTTCAGAAAAGAAAGCAAAAGAACGAAAAGTAAC ATTTGCTGATGAGCTTGACGACGAAGCTTCACAATCTTAATGATCAGATA TTGGGGCAACATTCACTTTTTTCAATACGTTCTTCTTTCTCGGTTTTTTT TCCACCGAGAACAAATCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001930TCONS_00001930Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001930-proteinTCONS_00001930-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:258311..268179 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01 0.03 0 0 0 0 0.06 0.02 0 0 0.08 0.1 2.89 4.11 5.51 3.23 0.27 0.21 1.62 1.77 0.1 0.08 0 0.08 0.02 0.01 0.02 0 0 0