XLOC_000958 (gene) - C. hemisphaerica

Overview
NameXLOC_000958
Unique NameXLOC_000958
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:477915..487235+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000958 ID=XLOC_000958|Name=XLOC_000958|organism=Clytia hemisphaerica|type=gene|length=9321bp|location=Sequence derived from alignment at sc0000012:477915..487235+ (Clytia hemisphaerica)
ATTGTTGATTGACTTATTGAAAAGAAGTGAGACTGAAGTTTGAGTAGAAC TGTTTGGTTTATGTAAATAATGTTTACTTTGAAAGGAATTATGTTTTGAT AGGGTAACAAGTCGAGGAATAAGTTGCTACTTACAGAAAGGAAAAAATTG TTTGACATTCTACTTTGGGTCATTCTATTTTTATCAAGCAATCCAATTCT ACTGCACATTGGTTATGAATAAAATATTGACGCATCGATTTGTAATATGG TTTTTGATGTTATATCCAGCATACATAACAATCGCAAGGGTAGGTTTCAA GAAATTATATcatttctgctgtttttttaTGGACAACGTAATGTAAACAA ATAAACATCCTTTCATAAACATAATTTCTTGAGTGCAAGAGAATTGACTT TGGCCAAAAGTTATAAAGAGCAAATTAAAGATCTTTAAAAGAGGCAAAAA GAATTGTGGTTATTTTTAAGCATGTACACGTTGTTTTAGCTACAGTATAC ATAACTATTTtattctaacctaagaatatcataagaatattttggaattt ttcccaaaaaggtaagaatatccataatgaaattgataaaaactattttt ataaaaaacgtgcattgGTATTCACTCCACTGGGgagggggtcccaccgg gtctgtgagaagggtgtaTGTCTAAGACCTTGGAAAGACTTAACTTAACT CCGATGTATTCTAGATTCTAGACCAATGAATTCTTAGCAAGCTCAGTTTA TTGTAATTGCTTTCGTGCCTTGGACCAGAAAAATAAGCCGTTTTTTTATC GGGCCAAAATGAGACACATATGCAAGAACTTATCCGGCGGttataaaaac atgtatgatttttctaattttaaaactttgaagaGGTCACCTATATTATA TAAAATCAAGAAGATctaaaaattcatgaaatatttACAGGTTTCGATCG CGCCTGCATACACTCACTCATAAGACTTCCTAGCCATAATGGCTAGCTTT GAGATTTTCCGTTTATCAGATTTGCTTGAGACAGCTAGGTCATATACTTA GTTGCTTGGTACGTCTTTCCCatcttttatataagaaccattAAATTTCT TCTTATGGTTTTCTATATATACATACTCTTTTTATTGGAACAATTTTGTA AGAAAAGCGGGGCTCAAATATgctagaaaatgaagaaaataagcAAAATA TTCAAGATCAAATTCAATACTAGCTGAAGCCTAGAATGACTTAATTTTAA GcaactttaaaaagtcaaagttAAAAAAGTATGGCGTTAAAGTTTAAAGG GGTACAACGGTAGTAAACGAAAACATTGGGGACCTTTAGCATATAGGACG GCAGATTTGAAAAAGTACGGCAGGATTGAACTAAAGGAAAGCTCTAAGGA GTTGATATCTGGATCGCAGCTAAATTCAATCTATTTTCTCATGAGAATAG AGAGTTTTAATAGGGTAATTAATAGACGTTTTCAAATCTCAAGACGactt caaaattcttttttgacgtcGTGTTTAGAACAAAGACGGTAAAGGAAGAG TACAATAGCTTTAAATGAATGAATCCCTCGAGAAttataacgtcattttt tataaaaacttgactgtatttcaaatttttccatgTGATATTAAATCTAG ATAAAATTGGATAGAATTTGCcatttgattttaagatttacttCACGTCC TCATTCAAGTCGCCGTCCTAGATGCTAAAGGTCCCTATTGCACGGGACAC GGCTATAAAACGAGACAAACAATCCATTTATCCATTTATATCTTCCCTAG GGAACAAGAACAAAAGACAGGACAAGAAGAAcaggtaaaatttcaaaata attaattttatactTTACACATCTTTCCCCCATTTTGCCCTTTCCATATT GGAATTAAATCGTTCTGAAGTTACCTTATGGTCAACCAGCAGAGCAGCTA CCGACGAATTTAGAAAGCTCACCAACAATGATGAACCATAAAAACGATTC CCTCTTTCAGtatttttgaacaatttccagggtggaaatttttcaatttt tcatctacttCGTAATCATTTCTCCACTTTTTAGGGTGAAAAAGGTTTCG ATTTTTTGCTCTGACAGGGTAAAGCTTACCAAGCATTtttatctgacagg gtccacttttcaaactccaggggcacgtccccgtcggccgtcaaggtcag tgccctcCCTGGGTAGAAGCCCTTAACCATAAAGACTTAGTTTAGCATAC ATTCTTgatatataaattatttttgtttcttataagAGACACGAGGGATC AGTGATGCTTATGGAAAATTGTgcacaaacaaaacaaagtttGAAGAAAC ATTAGCATCAAACCATCTCTACGACGGTAAAAAGTACAAATTTGAAGGTA ATTTCCTCTACTTTCATTCCTGAATTTGACTTGTTTACGTAGGCAGTTAA CGTACGGGAATGataaaaaactaagaaatgCAGAGCGATGGCTTATGTCG TAAAATATATTGTACTGAGATTCGGAACATTAATTTTTTGATCAGAGAAG TAAGTTTTGCAACCACTTTTAGCGCCGaagcagtagcgtagacaaggggA CGCACAATTTGTGtaagagagcagatttttatgccaGACGATGTCAACCA AACGCTATCGAACCAATTTTTGTaattgaacaatcaaatttTATCGAACT AATCGGATGATAACTGTTCAAttaccgaaccaaatcgaacagtaatcgaa ctttaccgTAATTTTCTACTTGATCCATTCAATTGctttcgattagttcg atagaGTTCGATGCGTGTTCGATAGTATTAGATGAGTGTTCGATAGATTC GATTTGCGTATCACGAGTCTAGCTCATCAGTAGACTGCTAATACCCGTCG TGTTTGCGTGATATCGctggaaaagtgagcgtaggagctAGGTTAGCGAG AGAGGAAAAAAGTCAGCGGCAGGGGTTGAAAACCCTAATCAGCTTATTTG ATATTctgatggcgtattggcggccgcccacgctgaagctctaaaggagc gggatAGTAGTCGCCAATTGATGTGCCGAAAAGCGCAATCGGGCTGTGCG ATTGGTAAGCACCCAATACGGGGGCTGGCGTCCAGACCTCCACGCCCAAT CGCTCTTTATCTTGCTGCTCTCTGAGACAATTAATTAGCAGGCTAGTCCT AGCTCATCAGTGGTTGTTTTCCGATCAAATCCAgcagcgtagacaggagg ggcgcaaaatttttGTAGGAGAGCAAATTTTATGACACtctaattatctt tttacattatgaatagataattacagtttCATGAAAATCTGCTCTCGtat acaaattttgcgcccTTCCTGTCTATGCTACTGAAATCTCTACCTTTTCA TTCTTTGTGCGCACCCGTGCGCTTTGACGAACAAAACTACCAAAGTGGAA TGCAGCCTTTAGAGTAACATGCATGGCAATCGAACACATCAAACTATAAT CGAACTgaatcgaacagtaatcgaaaTGATCGACTTGTAACCGAACAGTA ATCGAATTTTACCGGAATTTCTCagttcgattactgttcgattcAGTCAT AAAtgtcactttttttatataatgaGATTAAATAACCAGGTCAAAGACAA GTCACTTATTCTTTCGTACATAGAAACACAACTTTTCCTAAATGAGACCA ATCGACAATGTGCATCGATTTCACAGAGCACGTGCAAACTGAAAATACAA TGGTCATTACAAGATGATGAAAAAACTGGAAAAGAATTCTACCAAATCAG TTACTCCTTACAAAGTATTGGTAAGAAGTGGTTCTGCACTTTTctcaaaa tgggcttttccagaaaaagatttCAAGAGACACCCCCTTGGATTTCTTTG TAGTTTCAAAGACAACCCCTAATTTTCCAGACTTTTATGGAACCCCTAGA TTTTTTCGTGAAATTTTACAGGATTTTATAATATAAGGGATTTTCcaaag tatttcttatcaaaccTGCTTAATTCATTGCAAGCAATTTTTTTGTCTAG ATTGTTGGAAAGTAGGCGTTGTCGTTGAAACAGATGATCAAACTGCAAAG CAGATCAAATTCAACTCCAACAAAGATGTAAGAACCTACGACCAAGGGGT AAACCACTCaaaaaaatctcgtacacattttcaaaaagtcaaaaaaaggt ctgtaaaaagtcaaaaattctcaTCAATCAGCGAATGGGCAGAGGAATAT TTATGGACGGTGGTTATTGAaactattttttcggaaaaaaaagtcaaaat aaaagtccgaaaaagtcaaaaaaagtcaaaaaatcaaatgaaaattcaaa gtcAGAAATTATCGTACACTTTTTTTCAAGTAGTTTACCCTTCGCCTACG ACATTATATTTTTGCGTTTATATCACTCTTTTACACGTTTATTGCGTTAA TATAGTGCGTTGTACAGAGGATAAACTTTAGACATTCATTTCTTATTACG GCTTGATTTAAAGcaaaagatgaattttcaatGAGTCTAGAATGTAATAA AAGGAACAAGGTAAGAGAGACCAGCCCTGGGTTTGGTACAGGTTACTTAG AATCGTCTTTCCTCAAAGTTAAGAACACAACTGACACTACTGGACAATAA TTATTTGATGTCTCTTTCTGACTTATGTAGGGTGATTTGAAAATTAACTT CATTTTGTCATTCCGTTATCAAATCTCAATTGTACCTTTACCGAGTGGAG AGATCTACCAAGAACTATTTATCGCACCAAGTAAGAAATACTCTtaacat aataactcgtacactCAAATTCGAGGCCAGTCCAAAAGTTtgctttttaa agattttgatagCGCTCACCCAAGCCAAGGTATGTATCACGTCCATCAGA AAATCAgtggtgcaagtggctctggTTACAGTACACCTTTTTAACAATAG AACACCGAATTAGCAAATTACGTAAGGGGAAAAATATAATCTAGGAATTT TTTATCAACCTCTGCGACAAACTCTATCGTCGTTGACCAAGGATAGAACC CTACCTTAACCTGATTAAGTATTTCAACAATTGTCTTACTGAATAAGCTA TTGAATATCTTCATATCTACAATACAGACACCCTTGGCAGGTAGCTCTAC GGAAGATCTGATATTCACAACTGGTGACAATTTTATCCCCTTTCATCTTC TTTTCAGCTATTTGCGAATTAGAAGCAATATATGACATTTTGGAAAGTAA GTACAAACCTAACTCGTGGTTAAAGTTTTCAGAATTTAATCTTTAGAAAT GTAGAAAAATATatgacacccctttctcacagacccactgggaccccttc ccactggaaggattggcaaaaatatcgtcccggtggaaaattacagctaa tttttgtccctgctaaagataatcagataagcaaatcctcacaaaatatt gtactattttttccatccccactgaattttctggctcgaaaacaatggat ttCAAATCTGTAGCCACAAAAAATTGGGAtaatcaatccccatcgagtta tggtccgttatttttatccccactggctaaaataaatctcaccgggtctg tgagaagggttgTTATATGATTGATTCGTATCGAGAATTTCATAGATCAT ATACGATGTGCAAATGTTGAATAAACCTAACTTATCTTATCAACTTGTGA TTTTAGAAGCGGGGCCTGAAATTCAAGAATGCAGTGCCAAATTATGTAAG AATTTTATACTTATTCCGCTTTTCTCGGATTGAATTTTAAGGCTCCTGCT CGTCAGAGTTTTTGTTCCGCCGTAATCTTGTTTATTCCACTCAGTCTACC AAATTCACTAATACTGCACGCAATGAGATCTTGCTGTCAAAGGCTAGAAA AATCCTCAAACTAATATTTGAAAGAGTCTAAGTTCTTTCTTTCTTCCGCG TggtacattttttgaaatctggtGGCAAGATATTACTTTTAAACTAGCGT CTAAATAAAGATAACGCCAGGCTGCACAACCTTATTTAAAAATCAACTTA TATCGGCTTCAAATTCTACTTGAGATTTACCTCTAGTATCTTATCAGCCA GCCACTGAATCCTTTATCAAAAAAACAGACGAAGAATCATGGTGACTTAA AATTTCTTTCTAGCTTACAAAAGGATCCTGAAAGAAGCTAGGGTATTTTG CGGAAATAATACAATCCCTAAAGAACATCGGCGCTCCAAAATTCGTAACG AGTTGCATATCACCGAGCAATGTACGATCGTTTACGATGAAGATTACGAT ATGAAAGACAATAAAATCAATGTTCTTATGGTTTATTTAATTGTGGCAAT TCTTTTTGTGATCGTGATGTTAGGAGGTTGTATAtggtttttgaaaagaa aaaaatcgacATCGGATCAACAACAAAAGCTGTTTGGCAAAGGCCTTCAA GACCATCAGATTTCTGAAAAAGGTATGGGAGAAAGCTGAAAGATTGAATA TCATTTttattgttatcatttcatttTTCGCGACTTCAAGACCtgaatgt ttttaacatgtttttttatagattACTTTATTGATATATCGGCTAAAAAG GTATTTAAATCAAGCTAAAGAATAATTCAATCTGAGTTTGTTCTTAgggc aaatttcagcctcatACTGTAATAAGATTTTTATTATgaataaaaaagct tgtattttcttcttcatttaaggTATTATATCTGTCATGGTTGTTCATCG TCCTGGATGTGAGTACTTGGACAACTTGGTGCAGCAATTTTCAAGTATGT TGAAATCGTATGGCGTGAATGTTCACGTGACCTTTGAGGTGGACGATTTG TCAGCTGAAGGCGGTATCGCATCATATTTACAACGTTATATGCAAATTTG TGATTACGTCATCATGTTTGTAACAGATAACCACAAAGGTAAAAAGTTCT TTCAGAAGAGACTTTTTCATCTACTCCCCAGTAGATAGAGGATATACCAT ATTTTCCAATCATCTATTTGATCCATTTTATCCCCTGGATACGTGTTTAT CTTTAACTCTTTAACAAACACAAAAACGAACTAACATTTATCCCGAGTCA TTTATTACAAATTCACCCAATAGACTTTCTGATCtttatctttctttctt tagACAAGAACATTCTACTGAAACATCGACCGTACGAATTTGGACTTCGT ATATTAGAAGGAATGGCTTTACACGAGACCACAAACCATCAAGCACAATT CATTCCTGTTTACATCATAAAATATCGGAAAGCCGTTCAAATGTTTCCTA CATTTCTCATCCAATCAAATGCAGGTTATGGATTCCAGCTCCCAAAACAG GCAAATGATTTGATACGAAGGTTACGGCAGACGAAAACCAAATCTAAAGA CCAATCTATTAAAGATGGTCTCTTTATAACAGAGATGGGTGATCTGAGCA AGCAGTTTTTAATGCAACAACATTCGGATTGTAATAGTGAACATTGTCAT AAGGTAAACATTTTATCTTCAATAACTTTGATTAGTTCGGGAAATTGCAT AGAATGACAGCACTGCGAAATTCCGTAACTTTAGCGTTGTCAAATTTTGC AGTTTTTTCCACTGTAAAATTTGACAACGCGTCATCTTTCACAATCATTC TTGGCAGTAAGgctactttttttaaaagagcgCTAATTTATTCTAAAGAG TGAGATTTTGTCTGGTTTCGCTtgttatttaaagaaaaattcccGGGTAT TTATGATTTTCAATCACAGGCTTCAATTGGAAGCGTTGCGTAGAATAGCA GCGCACCTGTTAAGCACCCCGTGGAAGCGttgcgaaaaatcaaaatttag caGAGCTGTCATTCTATGCAGCTTGCCGTACTAAAAAAGTTGGTGAACAA CATTTGTTTCACGGAAAACGTGGATGTTAAATATACTATATAATGTTGTA TATGTGCGGGGAAGTAGGCTTACCAACTGACGGCTTGTGTGGCGAAAAaa ctggcttttagaatcgcagtGCAGTGCAgctaaaatttgatgaaattcat acccttatagtgcatttttctcaaatttttaactgttttagagcaaaaaa ttcagaattttcGGGCAGAATTTTGCAATTTCCTAGACATTTCCCACATC TAGTCTAATATCCTAGGCAGAGTTTTACATCTTTTTGATAAGTACCTTTA CAAATATTTGTCTTTTACAATTTGTCTTTTACAATTTGTCTTTTTATAAT CATTTTTTTAGGGTATGAGGCACACCAGCACTGCAAATCTATCATCCGTT TGGGCGACAACGGTCCACAGTGAAAAGAACCGGCACCGAAAATCATCACG TGACAGTCACGTGTTTgacgaagatgaagaagaagattaTGATCAACTTT TACTCAAGGAAAAAGAAATGTCAGATATCCaatatcaaaaaacaaaagCA TATCTACAGATGATGAGTCACGAAAGCCAAGCTACTGATCAGACAGACAT TACTTCATTAGATTCAATCGGTGATACGGAGTCTTTATCACCTAACCATT TGAAAAAAACGTATCAGGAACACTGTGTGAGGGATGGGTACAAGAGAACT AGTAGGAGTAGTGATGAAGTTTTTTGTGATCAACAACATCGTCTGTTGCG TGGAGAAGATTGTAGTTTTGATACCACGACACAGTGTTGATGTTCCTAGA AAActgagaaaaaacaaaaattaaaggaAGGTTTATTTAAATTATCAGAA GAATATATGCTTTAACAATTGCTCCAGCCTAGcaatgtattttttatttt catgttttgatgaTTCTGGGAGAACTTGGAAATTTCCCAACATATACCTG TCAAGCTGACATGATTGAAACCGAATagcatttttgattttctaagcgaa ttacaaagatttttaaattaatcaagaattttttgaggtttttatCTCGA CGGGAACTGTGGTTACTGTTCGAACGAAAAGGTTCGATTAATACTTTCGC GAGCTCATGCAAataaaaaagttcgattaaattcgGGTTAGGGAGAGTTT ACTTCAAATCATATCTGGGCGAGGGCGGTTTTAGTTTTTTAGGAGCTAAC AAGAAAGGCGAAAAAAAACAAGGACATTCCCTTAAAGGCTCAAAAATTCC ATTACGCATCTGTTTGTTCAAAGTTTGGAATTTGgcatttaaaatttaat ttagttttttgtattttcatctTATCATATAAAAACTGTTGTACTTTTTT TCTGGGTAAATAATTTTGCAGATGTACATACATATAacctattttataag aacaatctaaCATGATCGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001786TCONS_00001786Clytia hemisphaericatranscript
TCONS_00001787TCONS_00001787Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001786-proteinTCONS_00001786-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:477915..487235 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.75 5.46 1.85 1.07 4.22 3.81 14.06 12.94 9.27 7.71 5.89 7.43 7.97 10.23 4.67 4.95 1.67 1.98 7.15 7.44 1.1 0.69 4.6 3.99 0.8 0.76 0.32 0.52 2.66 2.79