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XLOC_000945 (gene) - C. hemisphaerica

Overview
NameXLOC_000945
Unique NameXLOC_000945
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:141795..148643+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000945 ID=XLOC_000945|Name=XLOC_000945|organism=Clytia hemisphaerica|type=gene|length=6849bp|location=Sequence derived from alignment at sc0000012:141795..148643+ (Clytia hemisphaerica)
CCACGGTTTTTggagttaaaaaaaaagaaaacaaaataacaaaCCAAAAT GGCGGCGAGAACTTGACGCAGCAAAAATTCTAAAGAAAGCAGGACTTTTT ATATTTCAACTTTAATTTTCTTATGTTTTTACAAGATGAAGGCAAATGTC TCTGCTCAAGATAAATCTTATAGTGACTTAGATCTTCCGTTTGAAAAACT CAATGTAAGCTATGATAATAATGAGGAAGACTCAAGAAAAGAAACGTTGA AATCAGCTGATTATCATCAGCCGCAAAGCAATACTGCAACTTCAACCAAA GAAACAATTTCAATTCACCAGAAAAGGTAAATATAAACTGTTTATATGTT TTTACAGATAATTAagatttagtttttgttttgtttttggtgTTTGGTGC ATAGGACTGAAGATAAGTTTTAGGTTTGAATAGTCGTTTTTGTTGTGGGA GAATGTGACATATTTACGAGGACGCCCTCCCTGCGCTCCAGAAACGTCCG GAGCAAAAAGTGCCGTTTTTTTCATGCTCCGGAACACCGGAAGATTCCGG AGCACTTCCGGTGTTCCGGAGGTAGATTTTCGGCGATTGGTCTATGCACC GGACAGTCAGGATTAAAACTGCGCTtaaataggaacaaatttttcgattt cacaaatattcttatctaggcatattttttattctaaggttagaatattt tagagatttttattttacactaaaactaaaaaaagtcgCATGTATCAATT AttatctatgttttcatttaggTATTTTCTAACTGTGTCCCAAATTTCAG AAAGATTCATCAATGCAGTATTGAATTATTGCATTTTAAAGTTTCCATGC AGATTCCACTGCTTATTAATGGTCTATTTACACATCAAATCCCGTTTTTT AGtaaagaaagccttaaaatgttcatatttaggatattttttacaaaagc taAGATTCTCCACCCTTCCACCCACCAAAAGtgctgatttttggaaaaag aaaccACTTTGCattaccgtgagaggtcctaaagccgacagcccagccta attccgaccccccgaataactgttatgaaaaaaaattctatgtttacaaa cattccctctccaagttgaacgataaactattgctagaactctcgaaaca aaacatctaacaagatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGCG CATAactttgtgaaaaaagttttgatttttattaaatttctaaactttgt gaaaaatgttttgatcttTATTAAATTTCTAAACCAGGTATGATTTTAGT ATGCCTGACCAAATTCTAATAACACTTTGTCACAATTCTTCAGGTGCTCC TACTAGAAATTCACACTCTAGAAATTGTAACTGACTGCCATTAACAGTTA AGCTAGTCACATACTCTAGAAAAAACTTTGCGAAAAGTAGTTCAGTCTCT ATAAAATTTCAACAGAAACTGTATTTTAGTAAGGTAGGTTACCCTTTTAT GGACACCCCCTTTTATGGACACCCCCTATTATGGACAAACCCTTCTAAAA GATTACAGTACACGTAGTGTTCATATTATATCATGATAATTTatataaag attttatttttttatttttgataacatAAGTAAAGAAGTAAAAATCAGAC AGAAAATGTTGGGAAAAAAATCGACATGATAAACTTTAAAATGTCTCCCA TGTAGTAATGGACTTGTGGATCTGTATTGTCTTCTAACATCATCAAAGTA ATTTATTTGACTAATGATTGGTGATGAAATTATGGTAAAATAGTGTTTTA AATGGGCGGGTCCACCCATTCTCTAACATGGATGTTTGTTACCTATTATG AACAGGTGGGTGTttccaaccaaaaaagcccaaaacATGCGCCAAGGTCa caaaacacaatctgcgtccagatgtgtgaacaataaaaaaataatatgtg GTTGTCATTTTATCCAGTGTTCTGGCGGCAATCAAATATATGTTTCGTTC GTgtcaaaaatcttcttaaaattgaGTCAGTCAGTCGGTTGGTAGTAAAT CTAGTcgggttttttggaaaattgtttcaaagtatagtttttaatattta ttcgcTCGCTTGATGAAAAATTCTGACAATTTTCTGACTCTTCCGGCATT TTTGTCTGCCAAGTTGGTTGGATTGGTTGGCCGACGCAAACAGCCAAcgc gaacagaacatatttttgattgtctCCCTCTGCTGTTGTTGTAGCCACTT GTAgccaaacacgtccaagtccaaaaacatGATTGCATcctgtctttatc aaatttagacagtagctgtacttttttatactttatcatattgcaataac attataacatgATCAATTCCACCTACAGCTAGAAGCAAACAggaaaaata tgtttatttATTGCAAAAAGCTGAAATTCTTGGAAATTCAACTaggtaaa aataacaaaaacttgagcaaattgcTAAACCttcaacaaatataaaaaag gatctccttgatgaaaatcatgtgtttgatttgccaagtttcaaagtcat tataaaaaagatatgacagaaattgaagcttgcaataTGCATTTACTTCC TGCATTTACACTGAAAACACTGAGCCGCTTGAGCCGTCATCTTGAAACAC CATATCtatgttttctaaaaacaacacacgctaaaagtacactaaaagtt aacccgatcggatataaactttagaaatcggggaaacacggCTTACGTAA TGAGCATATCGGggtaacatgttttttttgcttttggtcTGATGATGGTG AAAAAGCCTATTTTAATAATCAGCTGTTGGCTGACTAATTATTTTTTAAC CAAATTTGCGCTGAGACGCTCATCATGCTGAGAAAAAATCACACTTGTCC CATACATGACGGAgtgaaaaactcaaaatcaGTGATAtctacaaaaaatg ttttgtatttCCTGAAGTCACTTTTATGTATCAAAATGCACTAAAAGTTT TACTATACATATCTTTCGGGATATTTCACACTTTGTGTGTCGCGTACGGG ACAAAATTAGGATTTCCATTTGTCCCGTATAcgacaaaatttgaaattcc ttAAATTTAACAAGAAAATTCTATTTTGGCCAAATCTTTTGCATTGATTG GTAAATCTACACCATATTGCTTCtttaaaatatccaaaaaattttaagtt agtTGTATAAATGAAAGTTATTAAGGGTTAAAGAGTGATTTCCCCCGATT CAAGTACAATAGTGTATACCACAGATAGACTCTGATAGACCTATTTTAGA ATGaaaaagttaagtttttctgaaagtcaAAAGGTTAGTGAAGATTTCCA AAAAGTTATTTGATTCTGAATTACTATTTTCTCTTCAAATTGAGAGGCTG TTAACATAGCTACAATTTTGTCGCGTACGGGACAAATTTTTAGCTGTAAA ACCcgtggaaaaattaaaaacaggaAAACGGCTTGTAAAGTAATGGCTCT TTTGAATAGTTTTACCAGACGATATCTTTTTTGTACAGTAAATGCTTTCA GTTAACATTCTGCATACATCACACTTTCCAAGGCTTTCTTTCCAAATATT GGTATTAATTAAttgatttaaaagattttcaaaaactttgtctgaaaatt gaagaaaatttgaaaaaatttgtgttTATGTCACAGCGTGTCAGTGACTG CTTGACCACCCAGATTATCATTCACTTAATGAAAAAGGGGAGGCTGAAAA TTATAGCCGTGGAAAGATTTAGCCAATTTTGATccaaagatttaaaaaga ttttctactTTCAAATCTTTCAGAACTTTTTCTAAATGCTAGTAggtgct gtggtatagtggtcattgaccttggttgctgcacaggtgactgaggttcg attcccactcgcaacggttcacttggcaagtgaatgaaccttcgcccggg tcaacccatgccatgtgaggggaattggttagtcagtccaaggtgctgac ggggcgctcattgaaagcgtctatagttgcgaaataaggcctcaaagcct cctgcaactcaacgcatagaaaaatagaaatagaaaaattttaatgGGTA TTTGTGCCAGCTAGTACTGTCACAGAAACCTTTTTTGAGTACAGTCATTC aagctcaaaaatattttattcaacTGGTAGACCAAAGGTGGTGAATAATT TGATCTTAACTCTGTCATCATTACTTGTCATTCATTATAAACCTACACCG ACATCTCTTTCTTAATGAGTAGTATTTAGTTAATGGGCCATTAAGAAACA AGTAAACAGTAAATCTTTCGGGGAGCCGTGAGTTTGTAGATTTTTCCTTT AGATAGAAcatttaaatttgttttataattGTATATTTGTTTAATATACT AAAATATTGGCAAAGTGCAATACCAATAGAGGTATTTTCTTGCACTTATT ATGTCAGGAAACCTTGATGTCGTTGATGactgatttgatgaaaaagttgG ATACCACTCAAAACATGagtttttttttccagaaataggGAACCTTATCT AGGTACCTCGGATCAAATTTTATTTAGGATGCGGGGGTGTTGTCCATTAT AGAATCAGTATATCTATTTAAACAATCTATTTATGTTCTAAACCTCTTTC ATTTTCAGGCTCTCCAATGAAGATTTCGAGCAAGTTGGTCGCGTATACTG TTCAAAgaaaaaacgtaaacaaaaatcaaaatcattattgAGAGAAGCTA AACTTGTCTTACCCATCCAAAACTCGTCACCTGAAAATTCGACAAAGAAA ACATCAccttcatcaaaacaaaaattgaaatcctCATATAGGACTCGTGA TTTGTTTGATAACTCAGAGGAGTATTGTGATTGTGATAATGAGACTTATG AAAAAACCAACTTATCGAATACAAATATACACCAAACGGCGCCCGTCGCT ACTTGTAGTACACAATATATGAACCAACAAAGCCATGGAGGGCCATCTCA TGAACAGACTGATTCTGATCAACCGCCAAGTAATTTAAATGAGCATGAAC TAGCTTCATATTTTGAACAAATGTTATATATACCGAAACCGATGTCCCTT ATGGCGGAAATGATGTATGCCTGAAAAGACGAATGGATGATGTTATGTTG TTCTATTTGTGATTATGCGTCAGCTTGTATGTCATGACGTTTCCCAAACC TTGTCGGGGCAAATGTATCGGAGGAAAGTGACCACAGTTTTGAACAACCC GGACGGGGCTTATTCCGAATATTTGGAAAAGCTATCACATTTTTCTCCGA AGTTACCCCCAAAAAGGTATATGGTAAAAATGGAAGTTTCCTCAACCAAT TAGCACTTTAAAAAGTAATTGAACGTGGATTTGGAAGTCTGTAATGTCAA AACTATGTACAATAGAACACTCCCTTCTCACTGACCcgttagaatttttt cagccagtgggggtaaaaattaaAGACGGAAACTCGATCAAGATTGATAT CTTCATATGATTTATGGCTGTGGgtttgaatttcattgttttcatgtcgg aaaattcagtggggaggGTAAAATAACACGATATTTCGTAGTACATCTAT CTGTAGACACGtgtttcgtccttcccaggactcatcAGTGCGGCTAGACA GCTGTTATCACCAGAGTGTTCAAAACACTGAGTATTTCGTAGTatagatt tgtttatttgattattttcagcaggGACAAACCTTGAAGTATAATTTtac actggggacgatattttagcTAATTTTCCAAGTGGGAAGGAGTCcgccgg gtctgtgagaagagggtgtaatATATAAAGGATTTTTATCGTACTGTTCC TTAAGTGGGACGCAAACCGGCCAACATTTCGACCAACATCCACTGACCAA CATGTTGGCCAACAACGTTGATCGGTTTGCGGTAGGCGCCAACATGctcg agaagaaaaaaaatcaatatttgttaaatatttgATAAATGTTGGTCAac atttccgccaaaatttgaTGTTGGTGGCATGTTTGTCGGTTTGCGCTGAG TAACCAACATGTTGTCCAACATTTCGACCAACATTTTAGTTTtcgaacgt tttttttttttacgtttttcgaaTGCTTCTTCATTGGACGTCAAAAACAA ATGAATGAACATTTCGTAATGTTGGCTGCTTGTTTTTTTAAATGCGCCAC CGCAAACCGTACCAACGTGTTGGCCGAAAATGTTGGTAAAAAATGTTGGC CAATATGTTGGCCGGTTTGCGCCCCACTTTATCCCTTAATGTAAATGCAT TTCTTGACATTCCTAATCATTTTTTATAAACCTTTCTTTTAATAGCAGTG TTGAAATATTTAAATCTCTCATTAAtatttagttttagtttttttttatc cattttcaaCAACGACCCGTGGTATCCAATTATGAGTACAGCATGTCGTA TTTACGGCTGTTTTTCCAAAAGTAAGACATTTCGGAAAGGGCAAAGGTAT ATCCATTTCAAAACCAAACTAAAGtatgtctcaatataatctgcagcgga gCGAAAAAGGCTGTACATTTTTTCGGATACCAAATAAattgcgattttgt gcttgttgaaaagaaatacaagaATGGAATGTTaccaaaaatataaatta actgattttcgttcgtccgttcgttcgtctgttaccagcttttctcggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001761TCONS_00001761Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001761-proteinTCONS_00001761-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:141795..148643 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.12 30.81 16.99 13.91 22.86 16.55 19.94 21.88 19.21 19.76 17.66 16.45 13.16 13.25 8.42 9.78 9.19 12.19 13.53 15.26 15.27 15.28 29.72 26.83 17.73 20.93 26.12 25.53 25.73 27.45