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XLOC_000717 (gene) - C. hemisphaerica

Overview
NameXLOC_000717
Unique NameXLOC_000717
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:118743..129909+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000717 ID=XLOC_000717|Name=XLOC_000717|organism=Clytia hemisphaerica|type=gene|length=11167bp|location=Sequence derived from alignment at sc0000010:118743..129909+ (Clytia hemisphaerica)
CACGTGTCAAATGCTGAATTTAAAGGCTGTTTAAACATTAAGGCATCAGG AAAAATAAACCTCCATGGTCTCAAACCCTTTTGAACGAGGAAGTTACTAT ATGTCAGGTAAATTTAGATTTTCCTACCCTGGTTTTTCCCAAGGGTTAAA TGGTTAAATATCCGGTATCTGGGATGGGAgaaattgttgttgttgttatt tcGGTATTGTAGATTTCCCCCTTTGCCCTTAGTCAGGTAGAGTTATGTTT ttcctttgaagaaaaaaacctGTGACTGATATTTCACATACATAGAATCC TCGggcttgggggggggggctaaaccatttttgcttgattgggggctgta tttttcgaaaaatacttAATACTTGATACTAAATGCttgctagggggggg ggggctaaaccatttttgcttgattgggggctgtatttttcgaaaaatac ttAATACTTGATACTAAATGCTTgctaggggggggggttaagtGTTGTcg tgtaatagaactgggggcagagctgatagtttgagaatattttaaattat gttaaaaatctatgctgtgaGGAAGGTTTTATCCCTTTATTTTTGCCTGC GGTGCAATAAATTCATTGAGAATTTGCATGCAAAATCTCTTTGATACTTT GCTTTGTGAACGTCGAAGGTgggggctatgtttctagaGTTTAGCTGGGG TTATttttcttagcccccccccccccctgaaaaatgctgggggctggacc cctATGCACACTACCGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTAtgtaattttacaattttcaaacacctctga catctttgcccttaaaaggacaacacattttgctgattcagcatttcatc gtttaaaaaattgccgttttcggcaataatttccgaaaagagcaataatt gcagtttttatcttaaacacccgactgataACCTGCATTCAATATGTATG ACCATGGATGGTTTCCCAGGCGGGCCAAAACATTCTTTACGCCCAAACAT TTTTGGCCTAAGTCCAGACAATCTCAATAATCTAACAGAACTGATGATCG AACCACAAAACAGTAGAACCAACAGAACACAAACAACCAAACAatgcaat gggctcttccagaaaaaatttgatatagGGGCGGGGTGAACGACAGGAGT TTTCAGATTAAAAAAGCACCAGTctatttttcaaagtgctttcgGAAATT Cctctcaattttttatttgaacccttggaaatttagaaaaaagtatcaga aagatttttccaccaaaaagttgattttgtattggaaatccaggaatttc aaaaaaacatttcgCCTCGGAATTCCGCTGTCGTCCATCCCCCTGTAACA GACTTtaactggaagagcccaatcaaatctcaatcgaatattaccacaAT TTTCAGATACAATTGATGTTTGATTTGATTCAATTGTGTTTGATTGTGTT CCCTTATCGTCTGCACTGTATGTAGATACAAGTGCTTGTTTATTGTACTG TCCTTGGTTGTCAAAGAAAACACACATAACATaaagttcatagttcagct gcttttcaaatttgatatttcaattttttggttttggaaaaaaacagGGT CGTgttcgggcccgtagaacaataaattaatttttcctcgcctaaaatAT CAAACCTATTGAAAGTGCAAGAATTTGCCATTAAAAGCTGAacaacaatc aaatcaatcaaatatttacccaaaattttgactttcaatTGAGATTGGAG CATTCGACAATCAAATTTTAATCTTTGGATCGCATTCGATTTGGTTTTAT TGATTTGATCGTTGATTCTGTTTCTCTTGCCAAGTTTGGGCCAcaagatt ttagattttcgtaTCCAAAAACCTGGCTCATACCTACTCAGAAGATGCAT TGACCAAGTCTGTGTTATGTTTAGGACTTCTTCATATTCAAAATTGCCAA GTGGCCTGAAAAAGTTTTGGGCATACTCTGGGTTGTCATTtaatttgaaa ccttttttaagGCATTTTATGATGATGTCAATTTCAAATAAACTTCCCTc ctaaaaagcaaaaattttaaacacctaatgtgttattcgaagtaatataC TCTTAGATTCCAAATAAAgggtggttggaaaattttccagattttaataa acgagGGGCCTAATTGTGgtggggggggttggaaattgtacttagGCTAA ATAAAGCTAAAATcgggctatttagagcaaaataaaggggccttctcttt ctCAATCACAATAAGGGCCGTGAGTCTTTTTTCCAGAGTTTTTGGGACAA TACACAATACACAAGCCATTGTGAAATCAAATTTTACATTATCTAAATCT TTCTGACACCAAAACTCTTTCTAGTTTTATTGACTAAGTGTTCAAAAAGG AAGTTTTACCTTCTCTAGGACAATAaacatgtttcttagttttaaaACCA TCCATTTTGTCCATTTAGTAAgaaaaatgatgttttttgaCTTTCGCATG ACAAAATCTAAGCCAAACCCTTGCATGTTTGGTACCGACGGAAAGAACAG GGAATTCCCCATCAGATCCTGTTTTCGATATTTTAGTTTAGTCTTTTCAG GGGGTACAATAGCTTCGAATCTACCAAAAATGTGTCTTCTTTCTCCTTCA AATAGTCATAAAAGTTGACTCGgacaaattgaacaaaaagtaaGGTCAGA GGCATATGCACAATTTATCTAGCTTTCCATCGGTTATACTTTTAATATAC TTTTATTGTGTCCCCATCATGcgaaagtaaaaaaacaacCCCCTGGTATG ACTtattctgtaatttttttttctaaagaattttgtttttatttacaaag atCTGCAGATCAGATATGCGCGCGCACaagttttaagaacaatttatatA CAGACCCATTAGAAAGCCTTGTATGATATCAGTCTTTAATTTCGAACGTC TGGTCTTTTTTTCGAAGGTCGAACAAAAAGATTCgtaatctttgaaaaat aaacaaactcagTAGTAGAGGAAGGAGGAAGAGAGTTAAATgtcagaaaa aataaaagtttagaAAGTCTGATATtgtttcagcttttcaaagaaattta tcatAAGTTTTTGGGCTTCAAGTGGAATCTTGGAATGTAACTTCAGTAGT CTTTTTACAAGTATTGAATATTTTAACTCGTTTAACACCTCTTCAAGCGA TGGTTTACAAATCCAGCAGCAGCAGCACTCAACAGAAAGCAATCATGCAA AGCAGAAGactttggtatttttttatGACACAGGGTTCTTTAAAAAGGTT GGTCACACATTATTTATTGGAATTTTTAAGCTGTATTGAGAGTGATTCTT ATTATTTACACAATCTTTGGGGTACTTAGCTAACCGTAGGTGGTGTGGTC TTTTGTAGGTTTTGCTTTGGTGAAGGGGGGAGTCTTTTCTGACAAAGGAT AGTTAGGGAGATTGACTCGAGCGAAAAAAAGATGTTTCAAACCCCTTATT TTAATTGagttgacagctgaaaatattcttaaaaattaataaacaggggg gggtcCTATTAAGGTCCGGGGGGAtggaaaatcttcgaaaaatttaACAA GCGCgggaccgtttatttggaacctaagagtaatacAGTATACTGGTTTT TGAATGAATCAGCCATTGTTACATGTCATGTTCTCTGTCAAAGTCAGAAA ACGTAAACCTAAAATTGCagcaaaaaacacacaaaataAATACCCGGGGG GCAACTAGAGTTGCGAGCTGAcaggggtgccgcccgactttctaCCCTTG GACTTAccaggactaaaaaggagaaaacaaaggaaaattttgtgaatttt gcgacccttattgggacacATTTGACCATCTTTccggggtaaaaagttga aattttccatttATATGACACTTGGTGGGACTGAAAatcgattttctgat ttttccgacccttagcagAACTTTGTAAATCCAagaaaggtacccttaag ggcggcacataccgtaccctccatttgcctaagtacctccCCGGTTGTAA ATACTTTTTTGAGTATGACTGGTAAAAATTTTGATAGTGTAAAATTCTAA TTCATTTATGctgaaatttcacaaaaaataggGTTTAGGCTATTTCGTGC AAATGACTTTGTCCACTAATTTGAGGGTCCACTTGTTGAGTGTCCgtctt ttggaaacttttttatgagggtTTGACTAGGAAATGGCTGGGAAAATAGA ATTGTctgctaatcagaggtgtctgccttttagagtgtcTGTTAGTTGAA GGTTTTACTGTAAGATAAATATTCGATAAGTATTCCAAAAGTTACCAAAT TGTTTGTTTAGATCTATAAGATAAGAATGAAAGCTACCAAACTTAGTATT GTTAGAATCGAATATCACTACTATCACTACTCTAAAGTAAAATTGATTAG TTCCATTTGTCTCATGTTATTATTATCCCCTGATCAAAGTTAAACCTATG CTTTTGAATGCGGTGAAATCAGTCAGATAAAGGACCATATTGAAGCATGT TCGAGGATTGAGAAACTTTGCCCACCATCTTTGCACCTCCTAAGTCAGTA AATTATatgtaaaaaatatattttcgagTGGTGATGTATATAAATTTACA ATCAGTGGTGATTTTAACCATATAACAGAAAGCAGGATTACACCTTCTTG TTAATAGCAGCCCCCTCTGactatcatttttaatttttcagcatGTGTAA GTATAGTATAATAGTAGGGTCATGCATGGGGAAATTGAAACCCTCAAGTA TGAAATAGAATGTTTTAGAATGGCAAATTATCATCTATCACTTGCCTTTA AAaggaaattatatatttttttaatttcaaaaattaaaattttgcagaCA TCATATGAAATAATTGTTGTGATCTTTAATCGCATGTAATTGGTATATAT AATGTCTAAAATCTTGAGACTGTAGAACAACCTGgtgggaacaatagaat ttctatcccaattgggattttgagagaaaattaTCCCTACTGTCAGAAGA AGTTCTACCGGTGGCGGGCTGTTTAACCCAATCTTAATGATTATTTGAAA CCTGATATGCAAATAAGAAATGTTTTGTTTACTGCAATATTTTGTTTCAA CATATACCATATCATGTTTGTATtatgaaatttgcaaaaatatttgGTAA GTTTTCTAGGTTGTACAGTTTACTTTTTTGTGAGTTTTTTATGTAGCTCT AGAAAATTGGTTTCAGATTTTTAATTTGGTGTTTGCTTTAAATGCACTCC AtccttttgtaattttttttcataattatgaTTTTATCTTGTCAAGAAAC TAAAGttcaagtttttataaaaaacagaaCAGTTTCCTAGGCTTCTTTGT AATTTAACTGTGAGCCACGCATGGTACTTTTGAAAGTGATTCAGATGATT TTGTATGTCAAAATATAATGACTGGTTTATGACAGTTTCAATTATGATAT GCTATCTAAATCAATTACAAAAAATGGATTATAAGAAATCACTTAGTGGT TTTTCTGATAACTTTTTTGTGTTTCAGATGTAACAAATTTATTGTTTTAT GAAATGGTATAACTCATAAATCATATAttccttcttttcttttttgtttt gctctaaaagacTAATGGTAGGGTTTATGAATTTGTTAATCAAAGATGTG tattttgatttgcatttaATTTTATCGAGACCCTCAGAAAGGCTGTCAAT ATTTTAATGATTCACCTTTTATCTACAGCTTTCCCTTTCATACTTCTTGA AAAGTTTCGATATCCAGAGATTTTTCTAAGCTCTTTGAGCCGGAGCCGCT TTTGTAAACTTAGATTGAATTTCTACTATGCCTGTAACTTGCTCAGCAAA GCTGTGCATTGATGAAGCTGGGGGTCTTGTGGGTGTTCAGAGGGCGAAAG TCCCAAAAAGTATGTAGATAATAATTAGTTATTGTTGctcataaacaaca aaaaagattaATTTCGCTAGAAAATTTGGctagaaaaaatctcatttatt TTGGATTGAGTCTCAAAAACTTAATCTTagattgagtattttggccCGTA TACAGACATAAAAAGTGCTTTGAAAAATCCCTGATATCATATCTCTAAAA TTGGTCAAGAAAGTTGATGAAGTCATATTTAGTTGAGATAATGAAATTAC ATTAATGAGAGCCTTTGTTGTCTGCGAGTAGTAAAAAAGTAATTATAGCA TGAGATTTAAATCGTAGAATGCCTCATTAAATGGACAATTTGGAATGTCA GATTGTCTGGTTATTTTGAGCTTAAAATTGaactattttttattatttgt atGATTTTTTGTCATCATTTTTTGTGTCGTTCTTCATATTTTTAggaatt tattttctaattatATAACTTGCAATTAATTACAAAATAATGAGGATTAC ATTTCTGTTGGATGGCTGTGTTTCCTTGATTAATTGTAATTTCCATGTCA TTTCCTTTGTGTTTCATCttcttttgaagaaaatttcattatgttttttg tttgaaatttttattatgTTGTGTTTGCGTGAGTTGTAGTAATAATAAGG TCTGCTGAGCATTTTTACTTTACCTGATAGTCCAGCTTGAGACTCTAGTA CCAAGGAAAACTTAGATGttatagtttttatttttagagatGCCTTGAAA TTTGGTTTCTATTTCCATACACTTTCAACTTATTagataaaaatgttctt taatgaaaaaggaaatttttttactGAAACAATAATTCTCTATTTCTCAg aataaaatgtttgttttgttacagttttaaatttttcctcgtcaacaaaa aagtttagtgtcaaaaatttttcttctaACACAACCAGTTTCGTTTCATT TTAATAATTCTGCTTTAATTTGTCCTAGAAAAGCACAATTGATACGAAAA AGTCAAACCAAAATGTTAATTGGTCTGTCTGAtctattttcaattatttt cctcctttgaaatttttctcggtAAAAATGACTTTTAATTAGACTTCTCT TTCTCATGGTCATGGAATTAATTAGTGAATGCAGTGTGACCATTTTCTCA ATTGATGTGAATGATTTCTGGTTGGTTTCTCTTTCATTCTGTTTAAGTTG GGTCAAGTTCAGTTGACAATAGGTTTTACACTACCTGTCTTAAACTTTTA GTACTTTTATATTGTGCagttaagatttaaaaaaatttcttgcacaattt ttggtacttttttaaagatttcttagGTAGCTTTTTAACTTATGAGGAAT TACATCATGACAggattaaaatgtttttatttttcacagtAGTTTGTAAA CAGTATCCTATAATTTTGATAAAGGATTTAGACTTTCTGAATTAGAAGAC TTATGTACCTATCTGATAGGGGTTAAAAATAATTCAGATTATGAATGTAT GAAGAATTGATTTGATTGTATTTGACAAATTCATAATTTTATCATCCATA TATTTTGTTAcgaattttgttttgttgatttatAAAGTTGTTTTAAAGTC TTGGTCTTGGATGATTTTTATTAGTGTTTTTGAGTTGTATCATTTTTTAC TGAACTTTTTAACTTAGCTTAATTGTGTGTGTCATGCTGATTTTAGGTCT ACTCTTTTTCGTCATTTTGAATTTATCATTTTGCTTAGTTATTGTAAACT TGtctcaagttttttttcaagaataacACTTTTCCAATTTTGATCGTCAA TGAAAACTCTCTACTGTCTCAGAAAAAATCGTTCTAAAAACTCACAACTT CAAAATATTGTGCCAAAGAATAATTCACATCTCTTGAAAAACGAAAGTTT GGGTTTGTACAAATGTATTTTTTAGGACATTCTTGACTTTAATGCGTGTA TAGCTGCCAGTCTTTTAAAGTATCTTTTTTTATAGAAagtttttcaagga aaatttccTTCTTTCAGTCACTGTTATTCTGATATTTTGTGTTCGGGTCG AGAACTCGAGTAAATCAGTGATTGGTAATGTTTGTTTGATAGGGAATCAA GATTGCAGTGATTTCCATGTGTTTTTACATAATACCCTCTTAGCTTAGAT AACTGATCAAGTTTAATCTTAGCTAATTATTTGAGATTTAGAAATTAGAA CGGTATTGATTTcagtagattttcatttatcagtttcttattatttgatt ttttcgtcTTACAGTTATGGTcaatttgcacgtttttttataaaaacatc caaaatatttgaagccttgggatgttcttaacttcttgagttttaagcct aaaaatgttcttattttcacatatTTGAGcacttttgtccattttcctaa gaaaaatcatctcaaatgaaaaacttttaccacataaatccacacacatt tttttttcaagaattgttTTTGAGCGgggaaaaattataattgcaatatt gacacttttcttttgttatttggagTTAGTGCGCAAAGgcttctagacga ctaaaattgttccctccattacttttttctttgtttcgctactatgtctg aattattcgtctagcttgctagactagaaaGCCTGTAATTCTCCACTTTT TGCTCCCAATTGTTTATTACCACTAATTCAATCTTATTGGACACGATCAT TTTAGTGATGctataatttgtttttctttcgacTTGAAATAACATACGTT AATTCTTTTAAGCGACGTGATATACGTCCAAAAATTTttaagctttcgga tgttcttaatcttttgagatgtaagcttaaaaatgttctcaacatgttct tattttgaccattctgtgaatatttttgaccattttcctgagaaataggt tgtttttgagtccacaaagccttaacaAAGCCTCAACTTGTTCTTGACCa ccgaagtcttatgttcttatatagtttgttcttataaaaaaacttgataT GAATTTTTGGCAGATCTTAATGACAGAAGACAGGTCATCAGTTAATACGC AAATTACGCATTTCATTGTTGATATTTTGACCATTAATCTTCCCACTTGC TtgcttttagaaagattttcgtTATCTTAGTTTGCCTAGTGAGAAATTGT GAATTTGCAATGAATATATTTCGATCTCTCTTTATTGGAATAATCAACTA AGTTTTTCAACTTCTTCTGTGTTTTCCTATCTTAGTTTCTATGAAAAACC ACTTATGCTTAATTACATGAGCcgtgttattcaatagacagatcAAGTTG ACACGCTTCGAATGCTGAATGCTGAATCGCAACGAAAATAATTATGCAAT TCTCAGaactcaaatttttttatcacttttttttcaatttttctataaga agCAATTCTACAAGTTTCTTCAAGAGTGTTAGTAATTTAGCAAGAGAAGC TACACCTTTGAGACatgtttgaatattttttgaaatcctgCGAAACTGCA TGTGACCTGACACTAATGGAACATATTTGagttatcttttcaaatatCCG CAGTAAATAAAATCCCCTTATGTTTTTCTGGGCATTGTgcttatgaaaat taaaaagctcTCAATGTCAGAATATTTTAACTGGGAATGAGGGAGGGGGG GTTGAATTCCTCTTTCCGAAATTTTCTTGACGTAAATATACGTTGTATTA ACGAGAAATACTCTTCTAACGTCTAATTCTTCCATTTATAACTATTTTAG TCTAAAATGGAGTTCTCAttcattttcagcaaaaaactAACAAAGGAGAA ATACAAACGGTACTACACAAAAAAACATCACCATGACAAGTGGGTACAAC TACGGTGGTACAGAAGAAATGACAACCAATGCAACTTCATATGATTTCGC ACAACACGCTCACGGTATGTATTGATAAAATTTCTCTATCTTACCCCTCT CCCAAACCCAACGCCCGTCTCAAAAACTGATAANAGCTACACCTTTGAGA CatgtttgaatattttttgaaatcctgCGAAACTGCATGTGACCTGACAC TAATGGAACATATTTGagttatcttttcaaatatCCGCAGTAAATAAAAT CCCCTTATGTTTTTCTGGGCATTGTgcttatgaaaattaaaaagctcTCA ATGTCAGAATATTTTAACTGGGAATGAGGGAGGGGGGGTTGAATTCCTCT TTCCGAAATTTTCTTGACGTAAATATACGTTGTATTAACGAGAAATACTC TTCTAACGTCTAATTCTTCCATTTATAACTATTTTAGTCTAAAATGGAGT TCTCAttcattttcagcaaaaaactAACAAAGGAGAAATACAAACGGTAC TCCACAATAAAACATCACCATGACAAGTGGGTACAACTACGGTGGTACAG AAGAAATGACAACCAATGCAACTTCATATGATTTCGCACAACACGCTCAC GGTATGTATTGATAAAATTTCTCTATCTTACCCCTCTCCCAAACCCAACG CCCGTCTCAAAAACTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001317TCONS_00001317Clytia hemisphaericatranscript
TCONS_00001318TCONS_00001318Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:118743..129909 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.71 11.52 27.7 22.42 20.47 17.08 16.27 16.24 5.69 5.28 5.13 2.25 8.41 4.66 11.49 11.82 11.4 3.89 5.38 5.63 2.45 3.58 4.84 5.28 21.73 21.01 7.86 5.77 5.62 3.82