XLOC_000616 (gene) - C. hemisphaerica

Overview
NameXLOC_000616
Unique NameXLOC_000616
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:152852..159470-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000616 ID=XLOC_000616|Name=XLOC_000616|organism=Clytia hemisphaerica|type=gene|length=6619bp|location=Sequence derived from alignment at sc0000007:152852..159470- (Clytia hemisphaerica)
GAAACCGTCTCGAATCTCTAGCTCGTGATTATAACATTACGTCATTTGAA AATCGCATTATCAGCACAAAATATCAAAACAAATATTGCAGCCTCCTCGA ACAGAAAAAATGTGAAAGTTCAATTTTTTTGATTTTGGAGAATAAGAACA GAGAAGATAAAAGAAAAAATTATTTAGTTTAAAGTTTGATAGTTTAAGAA ACTATGGATGGTTTTAGAAATGAACTACACATGCTTATTAATGAAATGGG ATTCAATAGAATCGAAGCAGAAATGGCTCTACAAGAATCTCGAGGAGACG TGAATGCTGCCATTGGTAAATTAACTTCTGGAACATATGCCCCTCCTCCT TACGATCCAGTTGGCATTGAACAAACTGCTACAGCATCTTCGAACATTTC TGAGAAAAACAGAGTGGACGAGCCTTCAAAGTTGACCTTTTCCAACCTTC TGGCAGACTTGAAAGGCAGTCACAAAGCACCCGTTGTTGAAGATAAACCC ACTGCACCATCTTTTTCAAATCTGTCAAATGATGTGAATCAAATTAAACT TGAATTGCCAGAAACAGCAAGAGAGATGCCACCCCCTTATGAAGTGGTTG ATAAATCACATAAAGTTAAAGCTTGGGAAAAAGAAGCGAATGTTTTCTAT TTTGATGCACCATCTTCACGATCTTCATCCTCAGCATCACCTTCTACTGG TGCTTATGGAGGTGGATTCAATCAATTCCAAAGTCAATCAATATACCTCA AGCAAGGAGATCGATGTGATGCTTGTTACAGTCTATTGGAGACCACAGAA GATGTTCTTACTCAAAATAATAAGGTAAATTAAAAATAACTTGATTCAAG GGTTTTTTGACAAAGTGTGTGGTAAAAAAGTGATAAGTATTTGTATATTT CAACTCAGAATAATTTGTGTTATTATCAACATCAAGAGACAAAGGCGTGT ATGCTATAAAATAAACTTTGAATTTCAGCATATTTATTTCAAAGAATTAT TAACCCATTTGAATTTTAGCACTATCATTCAATTTACACTGCACTCTAAA CACTGCATTCAGTCGAATAGCAATGCTAATTAGAATTACATAGGATCAAT GTTGCCTTCATTTGACTTTAAAAGAAGAAGAAGAGCATAGGTCTTCCCTA AAAGGGGATAGGCCTCCTGAAAAAAAATAGTCAAGAGAATCACAGCCCAA ACTCATCCTAAAAAAATATTAGCAGAAGATTGTCATACATAAGAAAATAC TAAAAGAATAAATAAAAGTCTAGTTATGAATTCAAATCATTAGATTTCTG CATTGAAATCTACCAGAAGCAAGAACATGCCAAAACGACTTACGTAACAT TTTTTGAAAGTTTTGAACAAAAATCGACCAAACATATTAGTCCGGGAGCC AAACCTGAAAAATGGCATTTTGCTTAACCCAAGATTCTACAGGATAAACT ATACATTTTTGGAATTCTTAACTATCCTAGTTTAAGAAATNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTAAGGATTTGTTAAGGAAAATATCTTTCCATGTATGATATAAT TTGCTATATCTCATGAATAAATTGACCAATTGCTTTGAAACTTTGCCAAA AGTTTCAAGATATATTGGTGATCATCATTGGCAAAAAGGTTTTCCGAAAA ATTATTTTTGGGGGTTTACCTGGGGGGAAATAGGGAAAATTTGGGTATTT TCAATGAATTTTGACACTTTATAAGACTGGGACCTACTAAAACAACTTAA ATTTAAGAATCTTAAAGAAAAAAATTGATGAAGAAGAAAATGAAGACTTT TGCGATGAAGAGTATTTCAACTTTGAAGAGCTTATTTTCGGCGAAGAAAA AACATTTTGAAATTTTTTTTGCGGTATATAGATGGTGTATCTTTTACCGA ACTAAAAATATATTTTCGGCAAATTTTTCTAAAGCAGGCTTACTTGTCTC AAAATCTTGAAAAAAGTGCTTTTTGACGAATTTTTCATCCCAATTGTTCA TAAAAAACTGCTATTACTTTTGATGCATCAATTTAGAAAAATTTTCCGAA AATTTTAAAACAGTTCAATTCTTTGCGGACAGTTTGAAAAAAATTTGAAA CCAAAAGGTTAATTACCCATTAAAACTTAGCACTTTTTATAAAAGAGGGT GATGCAACATATTATCAACGTCTTTTTTAAGTTCATAACGTCATTTTTGC AATTAAATTCTTAATTACTTTTAAGGGATTTGATCAAAAAGCAATTTGTA AAGGCAATTCTTTGTTATAAAGTGTAAAGGAACCTGAAACATAACTTTTA TGTCAATTTTTAAATCAATTTTTTGACTATTGTCAGACTCCTTAAGAGAA CCAAATGCGATGCTTGCTTTCTGGATCCTCATTTGAACGTCACCTTTGTC GGAGCAGTCCTTGTTAATCATACTCCCTAAATAAACGAACTTATCAAGAT AGACGCTGACCAATGATGATGTCAGACATGTCAAAGTTCTCATACATTCT TGGATTTTCATTTTTACTCGGTGGCTTTGGACAGATGAGAACGACTGATT TGGAGTCTTCTCGTGGCTCCAATGAACCAGAATGTACTTCCATCCAAAAA CGAGCAAGATGCGAACTCTGCTTTTTTCGACTGTTAAATAAGAGAGCAGT TTAATCGGCATACTCCTGGAGTGGTAGATCGTCTCCATTTGCTCTGTAGC TTCGACCAGTCATAACAGTATCTTCTTTTGTTTTGAAAATGCATGCTTGG ACTTCGGTTAATTTACGCCAGGTTATTATAACTGCTGCCATGAAAAACGT GACAAAAATCTGACTTTAGATAAACGTGACAAAAATTTGTCTTTAGATAA ACTATTAACCCTTTTGAATTAATGAGCATGCTCATTATTTTTGAATGACG ATTAAATTTTGCCGACAAACACTTAGTTACTTTGATATTGAACATTTTTC GTCCCATTTCTAAATTGATAATTTAGCGCTAAATATTTGGTTTATTTACA CCAAAGGTTTGCTACAGAAATTAAAGGAAATTGCTCAAATTTATTGTTGT TCTCCAGCCTTAATTCCTCTAAAAAAAGCCGAAGTTACTCTGGAAAATAA TTCTTCGGCAAAAACTATACATCAGAAACTTGCTGTCTTTCCGCAAATAC CAGGAAATCATAAATATTAAAAGCTTCATTTTGTTACAATCTAACAGTTA CTTGAAAGAAAAAAGAGCTCTTTTTTGGCTATACTAGCGAGTAGCTGTCG CTATGAATGCCCCGCGAACGCATTCTTAATCGAGAATGAACGTTTGAAGG CCGCATTCCACCAGATCGTTTTCTTGGAGCGCCATCCAATAAGCGCACAG CTAGAAATTTGTATTCGCTGAGCGCTTGTCTCGTCCCTTTGAAACCATTG TGAGCAGCACAATATCGAAAATATTTTTACACAAGAAAAAAAACACTAAA ATCAAATGTTTTTCTTCTCTCTGATTGGCTGACAAAAAAGAAACGAGGTG TACAGCTTAGCGCACACAGTAAAATATCTTGATATCCCTTGTTTACTTCG TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNATCCCTTGTTTACTTCGTAGGAACTAATTACCGAAAGGTA TATGGCTGTCTATCAAGAGTTATTGATCTGATTCTTATAAACTAGATGCT TATAAGAACAATATATATCCTCATATTGTACACTGTCCCTTGTTTGTTTA CTTTGTAAGAACTAAACCGAAGGGTATATCACCATCTATCAAGAGTTATT GATTTGATGCTTATAAGAAAAATGAAAATGCTCATGTTGTGCGCCATCCA TTGTTTACTATGTAAGAACTAAAACGTAAAAATCAACACAAGTCGCAACA AAATAGATAAAACGATAGGTGCGCGTGAGCATTTTATTAACCGCGGCGGC CTGCTCAGAATCGAAAGAAACAACATCATCAACATCATGAACATGAATAT TTTTCTGGCGAACAAGCCCACCACGTGAAGCAACAAAAGCCCCTGCGGGG CAATAATGAGCAAACTTTAAGGATAATTTAGATATCATCATCATAACATC ATAGCATGTCGCCTTTATATCATTCGGCAAAGCAATATCAAAATATTTCG CACATCTAACAATTTATTTTATCGCTCTTTAGATCTATCATGGTAAATGT TTCCGAAAGAAATTTGGTCCAAAATGTGCCTATTGCTGTTTCCCGCTATC TTTACCGGACAAAGACCACGATCTATCAGGTCGATATCTTGTTTATAAAA AGAAAGACTACCACGTGGAGTGCTATGAGAAATATGCTGGACCGCGATGT ACTTACTGTTTCAATGTCATCATCGAACGACCAAACGGTGAATTTTGTGG TAGTTGGATCGTCGATGGAAGTCATGAGTACCATACAGAGTGCTACCAAA AGAAACTACACAGTGCATGGAGGGCTCAAAATTCATGAATTATGGAAGAC AGTTTGTTTGTATATGGCGTAATTTAGTTTGATTCAAAGTTGTTTCAAAC TTTAAAAAGAAAGGTATAAAACTTTAACTCGATATCGTGCTAAATTTAAA CAAGACCTAGCTTTATGTTTAAAACAATAAGTTCAGTTGTTCAATTTTTT ATTTTGCAATTTGAAAGTAGATGGCAAGGAAGGACTTTAAAAGTTAATAT GTACAAAAAAGGGTTAAAAGAATCACCGTAACCACTTGTTCGGATGTCGG GGTGAACACACGATGAACAGCCAATGTGCTGAGTATCTATTGAAAATTTG ATTTTTTCCTCGTAAAGGGGTTGAAGAAATGAAGTATAAATAAGCCCGAA GGGCTAGAAGTGAATCTCATTGGTAGTAAGGTAGGATTTGAGGCCACTAA ATCCTACCAAAGTTGCGCGGACTTGAGCGTGCCCGTGTGGTTTTATACAA ATTACGGATAGACGGCTAGATTTCAAAAAAAATTCCACTCGAAAACAAAG AAATCGGTAAATCCGATCCGTCATCAAAAACCTGCGAAAGGTTAAAGGTT TGCTTCAATCCAAGGCCTTTTTTTGGCTTATACTTCATTAGGTTGAAGTT ATTCACCTTGAACTTACCTTAAATGACACGACCAAATGTATTGATTGATT CTGGTGAAGGCCAAATGTTAACGGGGTGCCAAGTAACGGATTTTCCATCC CCAACCAACAAAATCAGATTACTATACTATACTATACTACCTTATTACTC TAATGAAGAATACTTTGGTTAATCATGAGTTCTCCACTTGAAGCCACTTA TTGAATAAGTTATTTTTGTAAATTTATATTTTTAATCTAATTTTTGTCTT TTATCTAGATCTATTTTTATAGTTTAAAATTCAATACACTTCCTCGCAAT CTTCCAAATTAGTTGCTTCTAGAGTAGAAAAATCCGCTTTGCCCTTAAAA AAAATCCTCGTTTAAATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001098TCONS_00001098Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001098-proteinTCONS_00001098-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:152852..159470 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.75 2.42 1.52 1.14 15.92 12.01 8.37 10.39 8.13 13.08 19.24 8.35 21.2 15.52 11.96 16.05 6.36 10.98 21.38 25.29 13.11 13.62 8.58 9.26 16.28 18.45 35.48 31.04 24.26 19.7