XLOC_000599 (gene) - C. hemisphaerica

Overview
NameXLOC_000599
Unique NameXLOC_000599
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:1161088..1166368+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000599 ID=XLOC_000599|Name=XLOC_000599|organism=Clytia hemisphaerica|type=gene|length=5281bp|location=Sequence derived from alignment at sc0000007:1161088..1166368+ (Clytia hemisphaerica)
ttttaggcaaaataaaaatttgaacaatGAAATGAATATATCAAATACTT GCTTTCAAGGGCACAGAAATTGTGTCCTTATTTCTGATCACTTAGATTTC ATTTCTATCAATACTGTATCTGATTGGAGAAGAATTTTATTATATCTTGG CATTGAACAAAATATAATCAACAGAGTCGAAGAAGATGGTAATTTGCGGA ATTATGACTCGCGTGAAGTGGCTTATCAAGGAtatttgaaatggaaaaac atcgATCCCTACAAAGCATGCTTCTGTATTATTCAACAAGCTTTATCCAG AGCACAAAGAAATGATGTCACAAAATCactgaaagaaaaatacaaCTTTC ATGGTAAGAATATAGCAAGGCTTTTTGGTCAGTATTTATTTTGTTCAGTT ACATTACTGTGTTTATGATTAGAGAATCAAATAATCGAAAGGTTCTCAAT AGCACTCCGTACCTGAAATGTATACCTTTTATTTAACAACACCTTTAACC TTTAACAAATTTGATGCCAATATTGTGGTGTTTCTAATCAGATTCTTTTA TTTGTTCCAacaagaattttcttttttctttaaagttacctaaaattgaa aaaattatttaaccCTTTGTGTATAGTGCTTTTTGCCCTCCCCCCTCCCA AAAAAAAATACAGATTTTGataacatttgaaatatttatctaATTGACTT AAGAAATTTGAATTGGCACTTGGGTGAAAATTTTGGCATCATTGATGACA TGTATTTTTTGGGCATAGGATCAATTTTTGCCACCGGTTGCTATCGTGTA TTTTTTAGACCAGCCATAATTGCCCTTTTTTGCCTAAATCAACCCTATGA TACTGTATCTAGTGATTggaaaatgctattgacttgGAATTTCGACAAGT GTGGGTATTGATAAAGCTTGCAACCAAAACTTCAGCAAAATGGGACAAGC AGTTATACTGAATGTGAGCTTTCTGTATAAAATACAGGCCAGTCTGTTAA ATACCAGCCGGTCAAGTGAAGAAACTGCAATTTTGCACACTGTCTTCGAT GAATAATAAATATCACTGGTGAAAATATCATAAGTCAAAAGCTCCAATAG TTCCTAATCTCTGACAGTTGGTTAACATGCATTTTACACACCAGTctgca aagtaccaaatactcaagggaaaaaattcttttctgttACTAatctttta tttgacaaatcagcCCTCAGGAACAAATTGCAGTCAAATCGAGCGAGTGA ATTAGTCAATCATGATTTGATtaagtttgatcaattttgtaaatcatTTC CAGTTATTCATATCTACCTTACACTTGTTGATCTTGAGATTATAAGGAGT GCCTCCGGcaccctccccccccccaagaTCCCCTAgtaaaaaaaaggaag atgCTCAAAAGTTTAAAAGCAAAATATCNAAGGATCTTGAGATTATAAGG AGTGCCTTCGGCACCTTCCCCCCCCCCAAGATCCCCTAgtaaaaaaaagg aagatgCTCAAAAGTTTAAAAGCAAAATATCTTTATTGACTTGGGAATAT TAAGGCAAGCAGGGTTTTACCAGGTTTCTTTGCAATTAAGCTTTCTTAGT TTTTTTGCTTCTAAGACCCTACATTTGTCTACATTTTGtgctgatttttt tcttctatttagCGAGAAGAAGCATTCGCCACAATAGCTTCACATTTCCT ATCGAAAATTTTGTTGGTAGAGAGAAGGAGGTGGAGCAGATTATGCGATT TATTGATGATTCCAATGCCAAAAAGAAATTAATGGTTTTGTGTGGTATGC CATGTGTTGGAAAGTCTGCCTTGGTCCACCATGCAGTAAATAAGCTAGTC CAAAATCAACCTGATGTTGATGTCATTCGTCCTCTTTTTATTTCTAAGAA AGGGGAAACAAGTTGGGGTCTTGAAGATATTGCAGTCAATATATTGGAGG AGATACATCCTGATCAAGAGTACATCAGTTACAGAGTAGCTGCTTTGCAT AAAATATTGATAAGCTTGGAGAAACCAATGCTTTTGGTTCTTGAGCTGTG CGGTGTGGAGATCAAGAAGAACACAGTGACAGGATTCTCATTATTTTTAT CCAGCTTATTGCATGCCTCTAACcaacatttgaaaatcattCTGACAGCT TACAAGGCAGCAGATATTTTGAATCCACGACATGAGATATCATATGAAGA AATGCAACTCCAGGGTCTTTCACAACCAGAAGCTTTAAAAGTCCTACGTG CTATAAATCCTCGAATGACTAACATGAATTGCAAACGGCTCTATGATAAA TGTGGAGGTCATCcatatattttgagaaaaattggtGCTCATGTCAAGAA TTTCCATTCCAATGAAAAAGAATTGGAATCTTTTCTCAAAGAGCTGGGTA GCCCAAAACATCTTGATGTCTTGCACCCTATGATCGCACCACCAACAATC AAACACGATATGAAACTTGTATTTGATGAATTGGAAGATgtggaaaagaa aacattggtGCAGCTGTGCGGCTTTCCTGAAATCATCCCTGTCGATGCAC TTGAACACATTTTTACATCTTCTGTCTATCATACATGCAACCACTTATGC ATTAATCATTGCATTATTGAAAAGTCTAGCTCCGGAACATACTTCAAAAT GAATCTTTTAACAAGATCATGTATCAAAGACTTCGCACAATCTGATCCAG CCTTAAATCAAGTCCTCACAGAAGCCAAAATAGAGATTaacaaatactat ttgaatCTCATCAAATCCTTGGATGAGATTTTCATATTTCCCTGTAAACT CGAAAAGAAAAGCAATTGTTTTAATTTGGTCTCTGATTATCAAGAAAAAT GCACATTCTGCCCTGAGGACTGCTCCTGTCCGACAATCAAAATTGTAAAG TATCTTTTTCGTATCAGAAAAACTCTGATCATGCGAGCCATTCAACAAGG CTTATCTAGTGACATTCAATTCCATGAAACAGTGGAAATTGCATTGAAAG TCGTACACTTTTTACGATTTGTAATGAGTAAAGGAGATTTGCTGGAAATg tatgatgaaattttcaatatttgtaaaaaaagagGAGAGAAGTTGTTGAT GGCAATGGCTGTTGCGAATCTTGTATTTGTGAAAGCTTATTATCATGTGA GGGAAGGAGTGGAAGAAAACATCCATTACCTCACCAAAGCCATCAATGTG TTAGATGGTAGTCAGATGTATTTATATGGTGTTACTTACACCCTTATTTA TTGCTACATGAAACGTGGTCACTTATATACATTTACTTCTTGTAACCAAA AAGAGTGTCTGACAGACTTCAATCGAGCTGAGATGTTGATCAATAAgttt ttatcagaaaaagaaCGACAACTCTTTCTCATGGTTTTGAGCGGTTACTG TTCAGGTAAGAAAACTGCCGTGAACTTTCTTTATCTCGTTGTTTTAATTC ATTTCTCACAGTGCGTTAGTTACAGGGGGTAGGCTTTTACCCCAACGACT TTTAGAGGTGGTTTTTTTCCTAGAGATAAAAATTCAGCTTTCAAAGATCC TAATTCAAATAATTTTAGTCTTTGAGTCCCTTGAGCTCTAAAACCTCTCA CGAGCCCTCGTGACTTGTGTGCTTCTAGCTTCCTGATGTTTTTAGGCTCT TCTGCTTTTTTCTTTCTAGCGTTTCATTACAGTACGAAAGATTTCCATAA AAGCATCGAAGTGCGGAAAACTCAATTGATTGGCTATCAAAAGCATTTTG GTGTCCACACACATTGTGCAAGAGCTCTACACTACCAAAGTCATGCTTGC GGTAAGGTGGCTGATTATGGGAGCGCTATCAAGTGTGCACGAGTGGCTTA TGGTATTTACCACAAACTGTATGGAGATGGAGTTGAAACTATGAAGGTGC TGTCAACCCTTGGGAAAATGTACAtcaaaaatggccaaatcgagaaaggt tttcaaaagttagacCATGCTAAAAATGTTGCTGAAAATGCACTTGGGGA GCATGAAAAGGTTGCACGATGTTATGAACAGCTTGCTGTCGTCAAGAAAA GTCATGGCTTCTCCCTAGAAGCTGACGAATTAGAGCTCAGAGCAAAAGCC ATCCGTACAAACTTTGAAAGAAAATCAAGCATTAACATGAAGAAATATAG TTTGCAGTTGTCAAAGGATCATTTGGGTCATGACATTTATGCACTGAGCT CAGATGAAGTGCCAAAGAAGGATCATTATACACAGGTGGTGTTTTTGACC ATGTTTATTGCCATCATATGGCGTTGCTTTGAAATTTATTACACCTGTAA TTGTGATCGGTTTTCATTTTAATGTCTTTTTATTGAACTTTATGTACGTG TACTTGCATACCCGGGGATGGGGCACTTAGGCAAAATTGGGTACGGGACG TGTcgctggtcagggtcccttttttaggctctgaagatatctgacagggt cccaaatctACTAAATTTCAATATGTGTATctgaaattttacaatttttc gtctacttttctACGTCTacgtcatttttgccacttgttAGGGTGGAGAT tggaaaaactttcaatttttcgttctgacaaggtcaccattttaccaaaa attcataCCTGACAGGGTCAACTTTTTAAACTcaagcggcacgtccccgt cggccgtcaaggccAGTGCCCTCCCCGGGCTCGCATAAGACATCTCAATG TCAAAAATGACCATGTAGGATAAAACAACATTTTCTTCCAACATTGAGAG ATGGAGTCCAGGGTCAGTAAGTTAACATTTAAAAAAGAGATGCTACGGTC TAGATTGTATTTATGATTGTCTACTACATCTAGCTTTTAAACATTCCGAT AGCCTTTACTTTTAAAGTATTTCAAGTTTACCATGATTGACAATTAATGC TCAATTTcagtatttaattttttgtttcgattATTTGTGTAGTTTGAATT TATTGCAATTAGATTTTATATACCAGTacataaattataaaattaattat tttggaCATTTTAGGTTTACAATCATAatgatttttatataaaattcaaa tattttgatatatttttatagATTCTTGTACTTGTTGTAAAttagatttt gataattttctacGTTTGGGTTGAGGAGTTAACTCAAGCGGGATGCTgct ttattttatttgttaatCACGCACGCCTATGTTTATTTCAACTTGTAACT ATTTTATAAGCTCTTTAGGCTAAAGACATTCATTGACACTTTTCTTCCAT TCTCTTTCGGTTCAATCGTGATCAAAATGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001059TCONS_00001059Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001059-proteinTCONS_00001059-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1161088..1166368 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.9 3.81 1.49 1.36 9.75 7.89 6.86 7.46 4.46 6.67 5.98 3.28 5.2 6.44 5.03 5.47 6.52 5.96 5.41 5.81 5.6 4.9 7.6 8.5 4.39 5.25 2.74 2.6 5.3 5.02