XLOC_000575 (gene) - C. hemisphaerica

Overview
NameXLOC_000575
Unique NameXLOC_000575
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:316005..323341+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000575 ID=XLOC_000575|Name=XLOC_000575|organism=Clytia hemisphaerica|type=gene|length=7337bp|location=Sequence derived from alignment at sc0000007:316005..323341+ (Clytia hemisphaerica)
CAAAACTTTAAAATGTCGGGTCAAAATTTATAAAAGGAAAGTGGAATTTG GAatctaaaaaagtaaatattgtCGTTTGATTGTGCGACTTATTTCTTGC GTAAAAGAATTTAATCTTCTAATCGATGATTCGTGCGTGACATTATTTGA GATTGAGAGCCAATCAGAGGGCGTCATTTAAGTCACATGATTAAATGCAT CCAGCATACATACACTTAACAAGCAATTACTGTGTCAACTCTACTGATAG CGAGGCGAGTTATTTGAAACGAAGTGCGAAATCTACTTCACGTCAACATA CCTTGCAAAAGGGGGCTGGTGCTGACAAGAGGAGAAAAgtgttgaaaaca aaagaacaaaacgAAAGAAATCACATCACACACAAGACAAGAGAGTCGAG TTCTCTTTCACTCTATGATGAGATGAGCCTGATCGAGTTAAGTAAACATT GTAATAATGTAGAGATGGTGTCAAATTCAAagtaacaaaaacaaaaactt caTCTTGGAGATTACTTAACGATTGGTGTGCGAGCGAACAAGTTCAAAGA GATAGATCATCATtatcatcaaaaaagatttcgtACAACTCTCTTCAATA TAAAGAAGATCACCTCTTGACTTTTCTATTTAGTCGATCTTTTGATTGCT TTGACGACTTTCTACTACACATTCTCATACATTCTTGCACTGGACATCAG GAGAGAGTGAATGCAGCACGTAAATGATGAGCACTGCAGCAGGAGACGAT GAAGACACACATCAAGTGGTCTATAAATTCGATGACATCTCCAGCAACGA GGGAAGTTATACCAAcagtgaaaaagtgaaaaagactAAATTATGTTATG GCTTGTTATTCTTGATTGTAATTGCAGCATTAGCGACTATTACTGCTGGA GTTGTCTTGTTGAGGAGTGCAAGGGAGAACCAGGAAGTTAGGAAATACGA GAGCGAATTTGCAGAAAGATCTGCCACTGTATCACCGAGTATCAGAATCT CCAGCACCGAGCCATCAGTGCAATACATGAGAAACATCAGAGACATTGAT GATTATTGTGCACCTTCAGAAGAAGCTCAACGCATTCACCTTGCACAGTT TTTGCAACGTTGTCAACAGTTATACTTTCGAATTTATCCACATCAAGAGT TACTTGAGCGGAAAGATGAACCACAGAGTGTTTTGAACGGTATTGTCCAT AGGTAAGCCACCCCTGTATCAATGATTAGTTGAAAAGTTTTAGCAAGTAG GGTCAAATGGAATCAAATGGGATGGAAAAGGAAATTCTAAATGCCATTTT AGGTGTTTTTTCGTAGTTTAATTTCATTAACCCCTGTGAGATGTCTATTT TTTTGCGGGTGTTGGTTTTGAATATGTGAAACTTGACGAGTAAAAATTTG AAGGTTTAGGGTCTCTTAGCTCATAGCGTGCATCTGAATTATGAAGAAAG TGAGACTCAAGAATGGTAGATGTCTTCAATAcgttctttttaaaattgat gggtaatgaaaattcaattttgcgtgggtcaactTTCGAACGaggtgtga tttttttcatccttCGAGAATTTTCGTCAATTTGATCGCATTTTTGacct attttttgctgagttCAAGTTATAATGTATTGATACCAAGTCGTCATTTC TATAGCTCTTATCATCCTCGTTATAACGTCTAATTTGATATTCAAAATGT CTTTCCGTTCATCAGATATTAAGGGGCCAAAAATAGAAGAGAATGTTTAT AGGGAAAATATATGTAGGACATCTTACACTTTCAATGAGTGTAAACGGGA TAAGCCGATGGTTTCACTGCAGGAGTGTTGCTTCTCACCTTGTTAGTGGA GAGATACCCTTAAGAGATGAAAGTGTAATGTAAACAGCTTTTGTAGTTGC CAACCCGCTTCGAACCGGAATAAGAATGTGTTTGCCGTGGTTTCCAAGCT ACTGAACTATCTACAGGTAGCTCTAACACTAGTTTTTAAAGCGGGATAGA AATCATAAAGGAGTTCAAAACTAGATTATTTAATCTATCTATCGTTTTCA TTTCCATCTAGGTTTACACCTTACCTTCCGACACCATCGAAATTAAAAGA AACGACCGACCAGATCAACGAATTGAGAAAACAAATCGATTCAGTTCTAT ACAATGAAAGCGAAATGAAACCCAAAGAGAACCAAATGATTGCAAAGGTA AAAAGATACACCcagaaaaattcttattttgagTCCATGAAAAGGGCGGT TTTTAAGCTAGCTCGTAGTAAAAGGGATGAAATTTAAgcacttttttgaa atattgattaCAAGTCAGTGATACTTTAATCCTAATAAAGCCTCAAAGGC GGCAATCAACTTCTTGTAACCTTCTAACTCGTTTTGTGCAATTGAACAAT GAACTTGATTGAACTAACATGTTGTGTTCCAAAGTTttctgtttttgaaa acaagtgCCTCTTCACTGATCAACTTTGAAACTAAACTAGAAGCACTCTT GACATGATTGCTGTGATTCTACTCCAATTAACATAAACAGTTTATTTCGT gccaagaaaatattttaaagataaaaaggtcaaaattatttaaaagatag ttggtaaaatcgaaaaattcgtGATCTAAACTAAACGATAACTATACTTT CCATTCGCCTGTAAACACTCCAATCAATGACTTTTCATTCCAGATCAAAG TTTTCCTCTCACAAATGATGTCCGTCAATTTCGAGTCCGGTTTTTATGAC GGAGGGTGGATGTTTGGTCCGGAATACTTTTGCTTCAACCGAGTGTGCCG CTTGCAGGAGGAGATCAGTATTTTGACTTATTACTATCGCCCCAAGACTT ACGAAGATTTGGAaactctttacaatatatttctTCAATACAATCAAACC TTTCACCAAAACATGTAAGTTTCATCTCGATCAGCGAAGTTTGCAAGAAA CCCTTATATACCGTACTAACGATACAAAGGGttaaactttttgatttcaG CTCCCTTTGAGCANACTAAGAACGATTCCAAGGgttaaactttttgattt tagctCCCTTCGAGCATGACAAAAGGGAAAACTAAAGATCTCTACGAGAT TATTGACTGTCaaagATCTGTATCTTATATATATTGTCGAATATGTCATA AAGTTAAACATGCTATCTTTCCAACAGAGAGAATTTAAAGATGGGTATCA AAAGTGGAATGATCAAATCAAGATCAGCTTGCGAAGCAGGAATCAAagct tttgaagaaaataacaaGGACATCTTATTCGCAGGTAAATGATGACATTC AGAATGTTTGCATGGATTTGAGTTGTGTGAGGAGTGAAGGGGTGTAAACA GACTACTATTTCANTTGCATGGATTTGAGTTGTGTGAGGAGTGAAGGGGT GTAAACAGACTACTATTTCAAAATAGGTTCATGACATAAGTTGTTCtatg ataaaaagaaaattgtaatGTTTTTTCTCACTTTCTTTTATAGGTGCCAG AAAATACCCGATCATGAGCCGCAATATTTTGAATTCGGTCTTTTACTCAC AACTCGATAAAGACGCAGAGAAGAAATGGAGGAAATCGTACGGTCATTCG TCCGTCAGAACTTTATACAGTACTCTACTTCATGGCTTCATCTTCCCTGC AAGAAAGTACCACCGTTTTCTACAGAACGAATATCTAAGACAATGCCCAC CGGACCACGTAGCAACCGGTCTATCACACCTTCCGGTTATGTTCCAGTAT CTTGATGGCAAACCGAACTTCACGAAACCAACTACAATGAAGCTACCTTT GACAGGTGGCAAACTGGACGGTAAAAGGTTGTACAGCCAAGTTTTGAAGC GATACACGACTTTAAATGTGACATCAGAAGAAGTACACCAAGAAGGAATC AAACAGCTGGATATCTTCTACCCAAAGGTATTATAATATTCAAGTGAAAT TTACTCAAGGGGTTTAGCAGGGTTTTTCGAAGTATTTAAATCCGTTTTTT ATCGCCTACTTAATAATCCGCTAAAGACACACCCTTTATAATAGACAGAA AAAATGGTAGGATTAAAAGAGTTGTGTGACATTTTAAGTTAATCTATATT TGGTTGGAAAGAGTTCAGAAGGGAAACGTGTGAAAATAAACATAACGGCC GAATGAAGGAAAGACCATTCGTTTAGAATccaaagaatttcaaaacatgt ATATGAGAAACCTTGTGACGCAAAACACAATTGGTAGCAAAACCTTCACT TTTTACGATGTTATTCTTCGTAAAATCGGTATTGAGGACCCTCTTAAGAA TGCGTTAAGTAGGTCCTATACTTTTTATTATTGTACTACAGTAACGAGTT GTTTATACGTGTGATGACGTTCAAAAGTTTATCAGAAGATGTTTGAATGG CGGCCAGCCTCACATCCGGACAATGTTTTCTTTGGCTTAATATAATTCCG AGGCTAAAACCGTTGCATCGACTTCGCAATACGAGCTCAATTACCATGTC TATATAAGATTTAGTTTTCCAATTCATGTTCGTGTTTTTAAGCCACTCTT AGTAAATTTAGTAGGGCTTGAATCTTAGATTCCTTTATTCCTAAATTCTT TTTATTCTAGCTCGTGAACATTGCTAAGAACTTAACTGGTTCAAAGACAG AGGATGAggccatcagtaaaatcaaaagtaaGCTCTCCGCACCCAATCAA TTCCATGGTCCGAAAAAATTCCCTGAAGTGGAGAGCAACACTACAGCTTA CGCTCGTTGCAAAGATGAGTTCAGTGCACGAAAATATTGTCCGATCAGAT GGAAGAGCATGGAGAAATGGAAAAATGTAAGTCGGGGGTTTCATTACAAT TCTACCTCAACTTAAAACAGTGTAGAACGAATTTATATAAATTAGGAGAA TAGCACGTGTTTTCTTCAAGTTCCCTTTTCAAAGAGGTCAAGTTTAGCTC TTTAAGAATATCCACGAATGGTTCATTTATATTCTGTNCCTTTTCAAAGA AGTCAAGTTTAGCtctttaagaatattcatggATGCTTCAAATAAGTTAT CCTGCTTGAATCTCTTACAGTATTTGAATCGAATCATGGCGATGATCCAT CCCTTACTGAACGACGTCTTCCATTTCACCGGTGAAAAAGTCTCCGTACC GAACTGTCCGATCGAGATCCGTCCCCACTTCAACCCGACATTCAACTCGA TGTACGAACCAAGCGACGCCGAATGCACCACACCAACCGTCTTCGCCCTC CCTTTCTTCGCCGACAAGTATGGACCCAAATTTCAAGAATGGTCCATTGC TGGCCACGAAGCAAGACCTGGTCATAATTTCCAAATACAAGGTAAACATT AACCTCTAGCTTTCATATTTGTCTCCTAAAAAATGGCCCTGATGAAAATG AAGTCACACAGCTTTGTTCTCAGTGAGAATATCTATAACTTAATCTATAA CTTTTTTTACAGGAGCCGTTGAGTTATTCGCATCACCATGTGGAGACAAA ATCCAATCATTTTTCAACGATAAAGGTTTTTTTAGTGGATTCGTAGAAGG TTGGGCATCATACNAATCCAATCATTTTTCAACGATAAAGGTTTCTTTAG TGGATTCGTGGAAGGTTGGGCATCATACGCAGAAAACCCTGTtctttctg atgacgtcatgcttTATGAAAACAACCGTTTACAAAAACTTGGCATGTAT AAATGGCAGGTAATTCAATCTCTTTTTCACTCTGGTTCTCactctcaaaa tatttcaagtgTCCGATGTACTTAAGGGTAATTTCTAGCTAGTGATGATT AATCTCACTCTATCAAAACAAGCAGTAACAATCAGTCACACCCATCGTCA TCATCAGAGCTGTATTACAAGTTATACGTTGGACCGTTGTAAAATACCCT CCATTTCTTTTACTAAATCTCGCAATCATTATCATTTCTTAAAGGTATGG CGCGCTATAAGGCTTATAATCGATTCTGGACTTCACAGTAAGGACGGACA GAATATGGATTGGGCATTAAATCTTCTAAAGAAATATGCTTTGGATGATG GGTCAGATTTCAGCCGGAAAGAAGTCATCCGCTACATGTCAGAACCTGGA CAAGCGGCATCTTACATGATGGGCAGACTAGAGTTTATCAAAGCAAGAGA ACGAGTGGAAAAGGAACTCAGACATCATTTTAACATCAAAGATTTCCATT ATCAGGTTTGTAAATTTTGTTCATTTGTTCAGTGTACACTCTGGCAGTAA GAAAATAAATCATCGTAAAACAGCAGTGCCATCACGtactggcggattta agacaatagagcaagtacgtcggaaacatgcgaaaGAGTGCAATGTTCGt ttaaagacaatgaaattacaattacaaatctcttcctctgataagttcga cgtgGTTTAAAACCGCCTATGTGTAGAtatataaagtagatgcttgaTGA TTAAGAAAGATGTTCTtgaatataaaattttaatttgatccCACAAAGTC AGGCATTCTCTATTTTTCGAATATGGATAACAAGCTAGAAAATTCTTGAC AACAATACCATTTCTTATATTACAGGTATTATCATTGGGGCCAGTTCCAT TAAGCTACCTCCCAAAATACATCGAAAGATATCTTGGCTGTCTGAAGGAC CCTCTGAAGAAATACTGCGAATACATCTTCACCCCATTGAAGAGTATTCC AAAAAGTAAACAACATAAGTCTACGCATGCTCACTACCCAAGACAATTGC GATACAAAGAAAGTGCAAGGTTCTTACTGTGAAGTGGTAGGAGTGGTTCG GATGAAGGGGCCAAGGTGAGGTGAACTTGTGGTGCCTGGCGCCACGAGGC CATCAAAGGATCAAGACTTGATCAGGATGGAATCATAGGGAACGAAATGA TTATTGAAtaacttcaaaatggaataacAAATCACGAGATTACAAAAACA AGTCATTCATAGAAGAAAAAGAATAGCGAAATTTCATTGGTTTAATGGAT ATTTCCAAGAGTTGTACCACTATCACTATCACACGACAACCCGAAAAATG AATACAAGCATATTtcaaaccattttttttttaattagaaagTGAATATC CTACTTTCGTTTGTAAATATTATTTTCTGGTTTTCTACAGAAAGATTTTA TCGTTCAGTGTAAATAGGGCTTCTATCTTAAGATGATGATGAATATATTT AGGGAAAGTAAATTTTTTGTGATGTTTTGATCATGTTTTACAGCTACTTG TTTTGTTTGAAAACTTTCTCTTCATCGTCCACGAATAATCACATGGATCA TCTATGGGCGATTGAGAAACAATTATTTCATAACGCc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000988TCONS_00000988Clytia hemisphaericatranscript
TCONS_00000989TCONS_00000989Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000989-proteinTCONS_00000989-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:316005..323341 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.49 1.59 1.43 1.46 2.13 1.65 13.67 13.85 4.79 5.92 5.31 4.34 16.16 19.12 13.67 21.79 23.71 20.68 23.19 22.34 23.39 27.56 10.78 12.72 12.87 11.68 0.68 0.34 4.07 4.42