XLOC_000494 (gene) - C. hemisphaerica

Overview
NameXLOC_000494
Unique NameXLOC_000494
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:659231..669118-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000494 ID=XLOC_000494|Name=XLOC_000494|organism=Clytia hemisphaerica|type=gene|length=9888bp|location=Sequence derived from alignment at sc0000005:659231..669118- (Clytia hemisphaerica)
GGTATTCGATTACATGGTGACGTCATCTTACCTGAAAGTAACATTCAATT TTCATCCAACTCCTGTCTTGCCATGGAAACGAAACTCTTGCAACCATGCA ATGGTGCTGATTGCACCAAACTGATGTCCAGTAACAATCACACCATTCGT AACCTCACAGCTGTCGGTAAGTTTACTGCATATTCATAGAAATCAACACT CCTTTATTTAGAAAGTCAAGTCATTTTTTGTGATGAAAAGTTTTCCAAGT ACATATCTTCAAAAAAGGCTTTTTGAAAAAGAATTTTGAAAAAAGAATTT TTGATTTTGTATCTTATGTCAGTCGATTGATTTCTCAAATTATCTTCATA AACTAGTTTTATCATTCCTTTCCTGTAATAAAACCACACAGTTTTTAATA ATGATTTTTTTCTTATAAGAATCAAAAAGCTCAAAATTTTAGGATTTCTT TAACAATCGCCTCAATTCTTAGTTTCTTGATTTATAGCCGGGTAGCTCAA TCGGTAGAGCATTCGCCTTATAATCAAAGGGCTTTTGGTTCGATCTCCGG TCACCGCCAACTCAGTGAGTAGCTTAGATTGGGTAATCTGATCTAATTGG TAAGTTAATGGTACACCGCCTCAGCATTCGATCTCTTCGGTTTTACTTGA TTTCAAGTTAAGTTGGTCGCAGTCAATTAATTTTCTATTTCATTGGTAGG TAACCGACTTCCTTACGAAGTTCATTTAACCAATTTGAATGAAGGGACAT ACGTCATCTCTATTGTCATTCATATTGGCGCATGCGCAGAGAGTGATGGA CAGGCAATTGTTGATGGTGATTATTATAATGAAGATATGGAAGAGTTCAC TATCGATGATAATACGAATGATGTTGAGAAAGATATCTCTGTTGTCAAGT TGCAGCATTCTGAAGGTATGAGCAACTTCATTGCTAGCAAAATCACTGCT CTGAATGTTACGGTTAAAAGTGTATGATGTTTCTCGCGATTTAATAAGAG GTCACTTTCTTCCCTTATCATCAATACTGAACTTTTATTCTTCCCCGCTG ATATTACAATGTCTCACAGTGATTCTCCCTTGATTGTCACTTTCTCAAAC TGGTTGTTTTTAGGTGGAGTATCCATCTCTGGTCGTGTCCTCTTTCCACC AGAAACCACATCACTCCAAAGTGGATCTTGTCTTTCTGTCTCAACACGTA AACTCATCAAGTGTAAAAACAAGAGATGTAAGATACCACCTGTTGCGTCC AAAACTTGGGAAATGGTCAAATATCAACCCCAAGGGATCCCATATACTCT CTTTCTACCCATCGATTCACCTGGATCTTATTTGGTCAGCGCTGTTATCA ATAACGGTTGGTGTAAGTCTCAAGTCCCTGGAAAATGGATCCGACCAGGG GATCTTTACAATGATAAAATACATGATTTTGAACTGAAATCACCGGCAAC GTCTATTGGCAAAAATATTCAAACAGCTATTTTCACTGGTGAAGAAGATA CTGGCAATAAGACGCAATTAGAAAAGCCAGAACCTGCAGGTTGGTAAAAC TATTCTCTGAGCAAACGCTTTCAAACCACAAAATATCTTATATAAGATAC TAGATTGAGCTTATAGTTCGGTGCCGGCAATTTGATCGATCAAATCAATA TTTTCGCCTCGTCGCTTCACGCCATTCAGGTTTGGTTGAACAAATTGCCG GTACCAAGTTGTGGTCTACTATGGGCTAGTTTCAGCAAGAACGGCGGTCT ACTTTGCTTTACCTGCCGTTGCTTAGGAAATAATATCTAGTGTTTTATAT AAGAACCTTAAGAAAATATCGATTTTTAATGACTTTGTTAGAAAGTTGAA GTAAGCAAATAGATTCCAAACACTTTCATGGAAGGTGTGTGCCAGAACGT AGCAACCTCTGCAGAAATATATTCACAGATTTTCTTGACACTAAAAATGT TTATCGGCAAATGTATTGACATCAAGAATCAAGAACTCCAGGCCGTCAAA CATTTGGTCATCCCCCAAACGCTTATAGCATTTTCAATTTTTCTTTTTTT TCAGAAATTGCAGTGGATGGCCAAATATTTTTACCATCAAACAACAGCTT CATACCTCCTCATTCCTGCTTAACTGTCAAAGTATTACAAGATTGCCAGA ACACTAGCAAGTGTGGCCACGAACTTATCGCTGGTCAAGTTTTCCATGAT TTACATGTTGACCGCAATAATAGTCTACCCTATTATGTCGAACTGGAAAA TATCACTTCAACAGGTTCTTTCAGCATCAGTTATATTTTGAATATTGGTT GGTGTCATGGTGAGAATACAACGTCTGCTTTTGATGTGTTGATGTCAGGA GATTTGTATGCAGATGAACAATTGGTGATTGAAAAACAACCCACTGGCTT CATCGAGATGATCAAGGATGCATATCTCAACTTGTTTGAAGGTAACTTTT ATAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTGATTCTCCCTTGATTGTCACTTTCTCAAACTGGT TGTTTTTAGGTGGAGTATCCATCTCTGGTCGTGTCCTCTTTCCACCAGAA ACCACATCACTCCAAAGTGGATCTTGTCTTTCTGTCTCAACACGTAAACT CATCAAGTGTAAAAACAAGAGATGTAAGATACCACCTGTTGCGTCCAAAA CTTGGGAAATGGTCAAATATCAACCCCAAGGGATCCCATATACTCTCTTT CTACCCATCGATTCACCTGGATCTTATTTGGTCAGCGCTGTTATCAATAA CGGTTGGTGTAAGTCTCAAGTCCCTGGAAAATGGATCCGACCAGGGGATC TTTACAATGATAAAATACATGATTTTGAACTGAAATCACCGGCAACGTCT ATTGGCAAAAATATTCAAACAGCTATTTTCACTGGTGAAGAAGATACTGG CAATAAGACGCAATTAGAAAAACCAGAACCTGCAGGTTGGTAAAACTATT CTCTGAGCAAACGCTTTCAAACCACAAAATATCTTATATAAGATACTAGA TTGAGCTTATAGTTCGGTGCCGGCAATTTGATCGATCAAATCAATATTTT CGCCTCGTCGCTTCACGCCATTCAGGTTTGGTTGAACAAATTGCCGGTAC CAAGTTGTGGTCTACTATGGGCTAGTTTCAGCAAGAACGGCGGTCTACTT TGCTTTACCTGCCGTTGCTTAGGAAATAATATCTAGTGTTTTATATAAGA ACCTTAAGAAAATATCGATTTTTAATGACTTTGTTAGAAAGTTGAAGTAA GCAAATAGATTCCAAACACTTTCATGGAAGGTGTGTGCCAGAACGTAGCA ACCTCTGCAGAAATATATTCACAGATTTTCTTGACACTAAAAATGTTTAT CGGCAAATGTATTGACATCAAGAATCAAGAACTCCAGGCCGTCAAACATT TGGTCATCCCCCAAACGCTTATAGCATTTTCAATTTTTCCTTTTTTCAGA AATTGCAGTGGATGGCCAAATATTTTTACCATCAAACAACAGCTTCATAC CTCCTCATTCCTGCTTAACTGTCAAAGTATTACAAGATTGCCAGAACACT AGCAAGTGTGGCCACGAACTTATCGCTGGTCAAGTTTTCCATGATTTACA TGTTGACCGCAATAATAGTCTACCCTATTATGTCGAACTGGAAAATATCA CTTCAACAGGTTCTTTCAGCATCAGTTATATTTTGAATATTGGTTGGTGT CATGGTGAGAATACAACGTCTGCTTTTGATGTGTTGATGTCAGGAGATTT GTATGCAGATGAACAATTGGTGATTGAAAAACAACCCACTGGCTTCATCG AGATGATCAAGGATGCATATCTCAACTTGTTTGAAGGTAACTTTTATAAA AAAAAATTTCTTCGCCTATTATATTAACCATTCCACCTTATCCATCGTGT TTAGCAGCATTTTTTAGTACCCATAGGGTGGTTGTAGGGTGGTTGTCAGA TGGGTGCTAGATTTGAAACTCATTGAGAGGAGTCAATCGCGTACGATTCG CAGGCTGATTAAAAGTAAAATTTACTGCTGCAAGATTTTGAGAAACATAC TTATGGCTTGAAAACAAAAAGCTATTTGAAACATTCGGTCGCAATGATGG TTAAGGATTCACTTTTTTAAACCTGGGGAAAGATATTCCTTTGGTCATTC AGACTCAGTGGTTGAGAATGTTGTAAATTTAAGTTTAACTTTCCAGAAAA GGAACTATCGAGGTAAATTCAAAACCAATTCAAGTATTCAGGGATCACCT ACAACCATAACTGCAGGGAAGGAGGGGGATGCAAAATGTTATCATTGACT CGGTTTTCATTTGGTAGTGTTGACTTGAGCAGAGAGCTACGAGGGCCACT ATAACTTATGACGTCACTCGGATAAGGGCAAAGAGTCAGGGAGGGAGGAG GGCAAAAAAGTCTCAGAGAAAAAAGACCCAATCTGTTGAGAATGGCCACC CAGCTAGCGCATGATGCAGCGCTTATTAAATGCAAGTTAATTTGCGATTT AGCCTGTGTTAAAACTACACCGACATGTTTTCTTTACGCTTATCGTTTAG AACCCACGACAACGCCGGTAGCAACAACACCTGTTCCGTTCGCTACAACA GAAACCTACACAACTACTGCAGTACAAACTTCTGGGAACCCACTTGTGGC ACAGCCTAATGGAAACCCAACTGTGGCAGGACCTAATGGAAGCCCTACTG TCGTTATTGACAACTCTACCACTAATGCAACATTACAATCATCACCACAA CCCTCCCTGGAAAGTGATGAATTGGTCACTCTCCCTAAAGGTTTGCTTTT CATCCATTGAGAAATTTTTTCATTCAATTTTACTGCATCGACTAAAATCC TTAATTTTATTCCAAATAAGTGGCAAAGTCCAGAAAACGCAAAGAAAACA AACTGAATACTTCAGATATTCCTTGAAGTGATGAGGGCAACTCTCCCAAG CTATTACACAAAGAAGAAGCGTTAAATTTATAAACGTTGTTTCATTTTAT AGGTTTGCCAAGATCATGTGCCGAGATACGCGACAGTGGCGTCGGTAAAA TGGATGGCCAGTATATCGTTGAAGCGCGTGAAAATTGTCATCTCAGTTTG ATCTGTCAGGATATGGAAGGAGAGAATCCAAAAGAATTTCTTGGTGGACC CAACGAGGAAGAATGGAAGTACTGGCATTTTGCTGTCTTGATCAAAATCT CTCAAAAAGACAAAGAAAATATTGCGGATGGCGCATGTCTTGAAAAATCA GGTATGTCACGACACAACCTTTTTATTTTGTCAACTACGAAATTTGTTTA TTATTCAGTCAGTGCGAAGGGCAACCCAAAAAAAATATCGTATTTTTTTC CTTTTCGTCAAAACAGTTTAAAACTCTGATTCTTTCGTTTTCTCAACGTT TAAAACACTTAACTATTTGGTTAAGTGGATAACTCTGCTGTCTGCTGGTT GATTGATAACTTTGAAACCGCAAAATGATACATGCTTTCCTCTCAATTTA GTAGGGGGGGGGCTTCCATTACCTCTTTCAAATATGAGGGAAGTTGTGAC GGAAGTTTTTAAAAGCAGCGGAAAAGCAGAATGATATTTCTTTTTCCTGG AAATTGAGATAACAATCGTCAACCCTTCAGGAAAGAGTGATCTTCGTGAC ACCTCATAGAATGTTTTTGACGCTTATTGAAATATCTTAAAAATGTCGAT TCCTGCCCACGCTGAGTTTGATGGTTCTCATCAAGGCCCCTTGAACTTGC GCTTTGAAGGGTAGAGGTTTTAGGAAGTAGTTGTTTATTAATCTGCAGAT CTGTATTTTGATAACCATAGATCAACCTATCAAGGTTAAGATCGCCTTAT ATGGGCACAATGCCTGGGTATCGTTTGATGAGCCATCTCTGATATCTAAT CAACGTAATACATGTTTGTTTATTTATAGATCGTGGAAAAGATCTGCTAA AACGAATCGTCAAAGCTGGACTAGATCAAAACAACCCTGTCCAAGAATGG CGTTCAAAATTGTCAAAATTGTTAAGAGCTAAACGTAATACACTTGGCAC AGAATCAATCATCTCAAAAGCAAAAACAATATACGCAGGTAAATAACGTT CTGCTTGTCTTGTTTTTGAATAACAAACATCCATACTTTTGCCAGCCTTT GCCCGCCACTTGCTATTGCTTGCACGTGAAAGAAGAATGTTTTTCGCTTC TATTGCCAATAATTGAAGACACCTGATCCTTCAGGCAAAAATGTAGGAAC TATATAAACTTCATTTATTGGTTCAAAACGCCATATCTTACATAAAATTT CTACCAAGGGGTGTCGTCCGAAACACCCAACTCATCACATACCAAAATTG TTTTAGAATCTTTACTGCTATAAAATTTTAAAAATAATTTAGAAATTCCA ACCAAATTCTATCTAACAAGATATCTAAGCTAAGAATTCTCTGTCTGGTC CTTTTTGCATAGTGAGGGCCCCATCTACATGAAACAGGGTCAATCTCAAA ATTCATGTTTAGACAAACAGAAAAATTTGTTTTCTCAGGCCATAATTTTG AGATTTATTTGTCAACGACGATATTTACTATCACCATTAGCCAAGAAGCC AATCATTCCTTTTATCCCCGCCGGTAAGATTCTTGCTAGATCGCCGAGAC AGGAATGTTCCGATATAATTTTCCTTACTCATGGTAAAATAATCTACTGC CAATTAAGACAGAGAAAGCTTTTAGGTATTGTAAAAACTTTAATTTATTC TCAAATGGTCTGATGTACATGGGGTGTGCACAATGTAGCCTATAAACGAT GATAACGGAAAATCCTTTTAACTACAAATCCCAAATCATACACTCTAATC CCATTGTTTACAAAAGGTCCAAACATAATAAATAATATATCTACAAAAAG TCTTGTCTTGTTTTAAATGCAGCTTTATCAAAATCTATTTTTAGTTCAAG GATTTTATATATCTATAAAAAGATTTACTTTGGAAAATGTTCAAATCTCA CTTTGTCGTGTTGAAGTCAGGAAATTTGTATGCACAGATCTGTATGCGAT GAAATTTCTATTTTTAAATAGATTGAGTCACTCTTTGGGTCAAAATATAA ATGTGCAATGACAAGGTTTTAAATTACATACCAAAATATATCAAATCAAA ATAAAAACCCCTATCTCGATGTCTTGGTAAAAACATTTTGGTCAGCGGGA ATTAAAATTACATGTCTCGAAATTAGGATTGTATTGAATTTTTTTGGCCG TCAGTAAAATAGTCTATGGAAATCCAGTCCTCCACTTTCAATCTTTTATT ATAAAAGCTTTTTTTCATATGACATTTATATACACCCCCTTCTCGCAGAC CCACTGGAAACCCTTCCCAATGGAAAAATTGGCTAAAATATCGTCCTCGG TGGAAAATTATACTCCAATCTTTATAAACCAATCCTAACCGCAAAATTTT ATGTTATTTTTCCCATCCCCACTGAATCTTCTGACTTGAAAACAAATTAA TTGAAATCCCTAGCCATAAAAACAGGGAATATTAATCCCCATCGAGTTTT AGTCCATTGTTTTTATCCCCACTTTCTGAAAGAATCCTACCGGGTCTGTG AGAAGGGGGTGTATATACATAAGTGTTTAGTTTCCAATGATACAAAATTT AAATTGATAAATTTCGGCATGTTTAGTAAAAAAAAACCTGTTTTTCCTGT TACAGAATAAATTTAAAAGTATTTGGTATCTGTCGTAATATTATCCCCGA AATAAAAACAAATCAATCATCAGTTAAGTGGTTGTTAAGATCAGGCGGTA ACTAACGGACCTTTCAGACCGCATCATTTTATGATGATTTGGCACGTTTT TAACCAGTAAAGGTATTTCCCAACTGACACTTAAAGCTTCGTCAAAATTT ATTCCAATATTTCCAAGAACAAACCTGACAAAGATAACACCAAAAAGTGA TTTAGTATTATTTGAGTTCTGTGGAACTCAAGTTGGTGGATTTCAATCAT TTTGTTATCTTTGTGTTTAGGCTTTGTAAATGTGTGCACATTCAAGTTTA ATTCTCTGTGACTTGACTTGTTTTGTTATTCTCAGCCTGAGCAGCTCCTT GACAATTCCTAGTTTTTCGGACCCTTTTGATCCTGAAGTTCCTTATAAAC GTGTTCCTTATTTTTAGAAAACGGGTATGCCTTTTAAAATCATCCCCGAA ATTACATAACACATAAACTGCACTTAGAAAACAAAATATCGGATATCAGT TTTTGGAAATAGTGTCTGCTCACGTCACAAAATTTTGAATTCTGTAAACT AACTATATAGTGTGGTCGTGTTACAAAAATACAGGCTGTTTGTTGGAAAA AAATAAGATCTAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATGCTTA TACCTCAGGAAAAATTCCCCTAAAATCCCACTGGTGAGGAACATCCCTTT TTTGGGACATTTCTATTTGCCCCAGGCAAAATCCTAAAGGGCGAAATTTT TTGAAAATTTCAAACTTATTTCCAGACAATATCATGTATACCATTCGAGA GCTCTCGAAAAACTATATAGAAGACTTTTAAACGGTTATAGCTGATTTCC TTACCTAACTGGAGATGTTTCATGCGCAAAATCCACTTTTCGCCACACTT TGGTCAAAATTGACCATAAATAGCATCTTCTGCGTGAATTATCTTGAGTT AGGTAATGAAATTGGCTATACCCGTTTAAAAGTCTTCGTCTGAAAATGAG TTTGAAATTTTCAAAAAATTTTGCCCTTAGGGTTTTGCCTGGGGAAAAGA AATGTCCCAAAAAAGGGATGTTCCACCAGTGGGATTTTAGGGGAATTTTT CCTGAGGTATAAGCATCCTATAGAGAAGGTCTGGAGAAAGTTTCAGCTAG ATCTTATTGTTTTCCCGTAAATTATGCTGAACGACCCCACTAGTAACCGT AACAGCATTATTCCATCTTTCTTCAACAAGTGAGTAAGGACAAAGGCTGG CAAAAAGTGGGGAACGAAATGTTTAAGGTCTTTAAGGCGTAATTTAAAAA TTTGCAGTTTTTCAGTAAATTCATTTTCGCATTCGCAGTTTCGTATTTAC GCGAAAATAGCGCAGAATCACGCATTCATGCAATCAAAAAGTGGATTTCC ACGTTCACGCAACTAAAAAAGCCTATCCAATTCATTAAAAACCGCTGGAG GGGGGCTTCTTTCAGTCAGACTCGAGACTTTTTGGGCAAAAGAAAAAGAT GTTTTCATATTCTACTTTTATTTAACGACTAACGATCTTATGAAAGCATA TTTGTTGACAGAGAGGCTTCCTCACATACTAAATTCCTTTGAAATCTAAT ATTATATTTCTTTTTTTTTGTCACTTTTAGAATCAAAACAAGAAGGCAGT TGGGGAGTCATTTAAAACAACACATCCAAATTAGTGCTTTATAGAACATG ATTTTATCCTTTATATTTCTACCAATAATATAATATTTTTGTAAATAAAA ACTTCAAATATTAAATAAAAAATAATCTTCAAAAATTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000825TCONS_00000825Clytia hemisphaericatranscript
TCONS_00000824TCONS_00000824Clytia hemisphaericatranscript
TCONS_00000823TCONS_00000823Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000825-proteinTCONS_00000825-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:659231..669118 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51 0.41 0.18 0.18 11.21 12.55 60.4 65.98 6.56 5.41 47.22 34.65 37.79 31.57 25.1 75.69 46.43 46.77 0.4 0.48 25.54 27.28 15.5 16.41 17.17 21.36 4.64 1.19 0.37 0.45