XLOC_000470 (gene) - C. hemisphaerica

Overview
NameXLOC_000470
Unique NameXLOC_000470
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:36697..40201-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000470 ID=XLOC_000470|Name=XLOC_000470|organism=Clytia hemisphaerica|type=gene|length=3505bp|location=Sequence derived from alignment at sc0000005:36697..40201- (Clytia hemisphaerica)
CTTATTTATTGGTTGATGCGTAACAATTACCCTATTGTTTAATAATTTAT
GCGGTATTTTTTTCTTACGCTTGTATCATATGATCTTAATTATGTTCGAA
AGACCTCTCCGGGGAGAGTGAAATCCTCATTTTTGGAAACCTTAATTTGT
ACATATCAGCACTCCATCGCATACATGTTTTTCGTGTGTTGTTGTCTAGA
GAAAGTTTATTGATTGGAGAGTCATAAAGATATTCTTATCAAAGAAGACC
GATGTCATACTCTGAAACCCCATGTTGCGAGGGGTTGTGTATATATACAT
CGTTGAAAACTAATTGAAACTTCATTTGAAATAAAATAATTGTGACCCAA
GTTGTGAAGAAGAAGTTTTGCCAGTGCTATTGTTTGCATACGAAGCTCAA
TGCATTGAGAATCAGGGTAAGAATTTTTTCTATAATTTTAGAATGTTTTG
TCATATTTCGGCGGTTGGAACGCTGTGTCGAGTAAGATTTTTTTTAAGAG
AAGTGATTTTAGTAAATAAGTATAAGACTTCTAATTTAGTTGATCAAGCA
GGGAAAATACACAAATTTAAATTTTGGCGAGACTAATTTTAGCGCAACAT
TTGAAAAACTAAATTCACAGAGATTTTCACCAGTTTTCGACCAGTTTTTC
TTTTAAAGTATGTTTAGTAATTTACAAAGCATACTAAAAAATTTGAAAAA
AATAGTTTTTAACATCTAGATAATGAACTTCCCATCAAAGTTGATTTAAA
ATAATCAAAGAAAAATCCTTGACAGAATTTTACACTTTTTTGACATCTAT
CTACACTTTTTAAAACCACTGAATAACATTATGGGTTAAAACACAAAAGC
CTCGACTGGTATCCGCCTGTGCATCCGTTGTTGACTTGATAGTGGTTAAA
ATCAGATGTCAGTTTTCCTTTTTCGCTTTTTGTCCCATTTTTCATATTAG
ATAATCTGAATTTTGTTGAGTAAAACATTTGTCTGGAATGTGTGTTAGAT
CTTGTTCTAGATATTAAGAAAAGAGGAAAATTCGGAAATTTCCCCCGTTT
CTCTGGAAGATATAAACGAGTGGCAACAAGGGTTCATACTACTTTTCTAG
ATTCAATAAATAGTTAACCCAATACATATTAAGGAGGTTGATCACTGGAT
AGAAACCAAAGAGAAGTCAGATGTTTTCAAGGAATGCGTTTAAAAATCTA
AGTGACCTCTTAAAAAAAGTTTAAGATACAGGTCTACAATCGGTGCCGAA
ATATTTGGCACAAAAGGGAAAATCTCTCGAAACTTTAAAACCGCAAAGGA
ATTTTAGATGCTTTAAAGTACGGTTTAAAAGTAGAATTTTAACTCTGAGT
TTTAACATTAGATTTAAGGCTCTCAGGATCTAAAAGCTAAAAATTTTTCG
AATAAGGCTGAGAATATAGCCTGGAAGCCAATTAACCCCTACCAAATCGA
AAAAACAAAGGGGAAGTACTAAAACTGCAATTCCAGCCCGATCTTTAAAT
TCTGAAAAACGTTAAAATACCCAAAATTGCCAATATATTTCGGCGCCGAT
TGTAGCGCAAGCTTTAAATGAATGACCTCCCTTAATAAATGTCACAACAG
TATCGTTATGTAAAATGTCACAGGGGTCGTTGGGAGATTATCAAGATCTA
AATTGGCAGTGATTTCCTCTAAAAATAAGATTTAGCGGTTATTGCACTGC
GGGGTATCAATTGAGTTACTTTCTATCTTTCTGCACATGTGACTTAAATT
TTTATTCACTACCGGACATCCTAGCAGTGAGTTTTAACCACAGGATATAT
TTAGATTCTATTTTCTCAGATTTCACAATTTCAAAAATACTGAATTTAAG
TTTTGCTGATCGTTGCTTTTATCAAATTTATTTCAGACATTTTGTCTTGA
TGTTGCTGGTTGTATCGAATAATCTTTTTTTCTATATTTTAGACGAGAGA
GATGTTACATCAAAGACTATTATTACTGTTATCACTAGCCGTTTACGTTA
GCGCGGATGCGGAGCCGGCCCAACGTATCTACACGCGTAACGATGGTCCA
AAATGGATGCCTTTTGAGTGTGACTCTGGTTACGACTGCCCGTTGATGCA
GCGCCGTAAACGTAAAAGCCATTCTGAAATCTGTATTTTGAGTTCACCTA
ATTGGTACAAATTTCGATGGGAAAGTAAGGCTGAAAAGTTTGATCGATTC
AAAGCTGAAAGTGTTTCTGCTCCTCTTTCCAGAGCTTTCCAACAAAAAAA
TTTCTTGGAAGTTCTCTATCTCAATAACCGAAAGAAATTGATCGAGAAAG
GCAATGAAAAAGGTTTGGCTTATATCACTCATGTGAAATTCGATCAACTT
CAAAGAAAATATATCATTCACCTTTATCTGATGATTCCCAAACTTGCTGA
AGGTGACTTCAGAGTTCCATGCTCTCGTCTTCTTCCTCATAAAATGGGTC
AAAAAATCATTGGTCCCATTATGAAACTCCTTGGTGCCGAAAATTGTCCT
GAATTTCTAGGCAGATTTCAAGCCAGTAAAGTACGAGCGGCTCCAAGATG
TTTCTACGCGGTTGATAAGAGTCAAGATTCAGTGAAACTTCAAAAAGAGA
TGGGTTGGGATCAAAATGAATTTGTTGCAACTGGATTCAAGTCTGGGGAA
TTGAATGAACATGAATGGCACTTGGCACCAAATAATTTGTACACAGAATA
CGATAATGACGAGTAAAGCAAAAATATGGAAACATTTGTATGTAAAAAGA
TTGGAGAAAAATATCCTCAGTTGGCGAGAATGTCAAAATATCGCCTCTTT
GAGTGTTGAAGCAATATTCTTGGGTGAAAGAAACACCTAAAATGCGAATC
TAGACTCGCTTCGCTAAAACCAGTGACTATAGTATGATGGTTATGGTAAG
GCAACTGATAAATACTGGACATAACAGATGTTTTATAAACTTCTTAACAT
GGACCAAAGACATTGTATATAAGGGTGTGGTGGGTTGTAGTTGACCTGAA
TTGTAAATAGTTTTTTTATAAGTTTTATGATTATAATATTCTTTCCAGAG
TTGCAGACTATCGGAAATAATGAACATGCCCTGATTTCTGGCCCCACACC
AGATATTTTAAGAGGGTGTAACTATGCTGGTAGAAAAAAATTAATTTTGA
CCCTCTGATAGTTCTATTTCGGACTGATTTTACTCAGAAATTAGCCTTTT
CATTTTAAGAAATCATATTTTTGGATTGTGCTAACTCATAAAGTGTCATT
AAATGACACACGATTTGAAAAGCTGAGTATCAGCTGGTCAGATACTCCAA
GCTGGATTTTCAAGCAAAAGATAACAAAAAAAATTACTTGATATTTTAAG
AATAATTTTTTGCTAATTTATTTGCTTACTGAGTTTTTTAGAGTTTGAAT
GAAGTCCACGGGTAACCTGGAACCTATTGTATATAGTTTTAAAAGTAATT
TTGAGGTTTTAACCAGAAATAATATTTGATAATTAATTCCATCTTGCATC
AAGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000757TCONS_00000757Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000757-proteinTCONS_00000757-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:36697..40201 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.57	0.16	0.27	0.46	0.6	0.15	0.19	1.89	0.44	1.34	2.36	60.15	60.17	77.59	68.72	4.45	5.09	49.05	33.82	5.99	7.03	15.72	17.3	38.65	28.19	10.36	3.43	0.33	0.2