XLOC_000389 (gene) - C. hemisphaerica

Overview
NameXLOC_000389
Unique NameXLOC_000389
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:804530..807978-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000389 ID=XLOC_000389|Name=XLOC_000389|organism=Clytia hemisphaerica|type=gene|length=3449bp|location=Sequence derived from alignment at sc0000002:804530..807978- (Clytia hemisphaerica)
GGAACTTTTCACCATAAAATAAAGGGGTGAAAACCGTTAAAGCTTTCCAA
AACTTCCTGTTGTAAAGATTAGAAAAACAAAAAAACACAAGCTTCTAAGC
ATTGAAAAATAATAGGTTAATAGGGTTCTAGACATAACCTGCAGCTTCGG
TTATGCCAATGTCGTTGATGTTAATGGCAGCTTTCTTTGGGATTCTGCTT
CCCCTTATGCATAGAACTGTAGAACGAATGAGTGCAAAAGAAATTTTCGT
TCTCAGATAGTTCAAAGTAAGAGAGAAAAGTTCACCTCTCTTTTCAGCCA
TTAGTGCTGCAAGGGAACGAATGAAAATCTGTGCTTCCCTGCCAGTTCCG
CCATTGGTAGTAAAAACAAGCGGCGTAAAAAAGCCTCCTTCAATCCTGAT
GATGCGATCATTATAGTGTCTCTTTTTTTCCCTTTCGTTAGCTTCAAACA
TGCTAGACAGGCTCTTCCTAGAGTACCTTTGGGCATAGGCATTGAATACC
CTAACATAAAAAAATGCCCTCTGGCCTCTAGTCCAGAACCCCATAGCGCT
GATATCCGCTCTTGCTCCGTCCTCTCTGATCGTGCCAGGTGTTAAGTCCT
CTCCAGTAATGGGTTCTAGGCTTGGCTCGACCGCAACATCTTTCTTGACT
TCACTCAGTAGTGTCGATAGAGTGTCTCTTATCTCATTGTGTCTCTTATA
GACGAAACCTCCTTTTGGGCACGATAGTGCATGTTCGATTGTGAAACGAT
TACCACATGCGCAATTGGTGGGGAGATGTTTAAGTTGCCATCGATAGCGG
ATTGAGATGGAATCAAAGAACTCTTGTTTCGTTAAATTAAAATTCTCACA
TTTCAGTGGTTTTGCTGTGAGCCAGTTTGAGGCCCCTTTTATCTGAGCAA
GTTCGTTAGCCTTTCTCTGATCCGGTGTTATTTCCGTTCTTAATTCGTCC
AATAACCTTTGATGTCTAGCCTCATTCTCTCTCATGATCTTATACTTCAC
TTTTGTGTTGTTTCCCGGAAACTCTGTCGTTTGTGAGATGATGTTCTTGC
AGAGTTCATCACTGACTGTTTGAGAGTTCTTATACTCTGTACTGGCAATT
TCAGATAGGATAGGTAAGCCTAGGCCACCAAGTCTGACTGCGGGAGAGTT
AAAAGCTTCCTTTCAAGTCTGCTGCATCGATGACCTTCTGTCAAAGCTGG
TATCAGATGGTTGTCAATTGCTTCGTCTAGTGGTATGAGCAGCTCATCAA
TGTCCTTAAGCACACGTAAATGGTAAGTAAATTTGTGGATGAAGCCACCG
ACGAATGAACTATAGGCGCATTGGGGTTGTGATTTCGCAATCTCGCTGAG
TGTTTCGATTTGTTTCACCCATTTCTCAACAAGTCCCTTGAAATAATCAG
TTTTGAAATCTTGTGTACCTAGTGTTCCTCCCAAGTACTTTCTTCCTGTG
CAAATAATATTTACATTAGTCCCTGTAAAAATACGTTCTGCCTCAGTAAA
GTCCTCGTCCCTAACCACTAACCACGATTTTGATGCCTTGGGGTAGTATC
CAAAGATAGGACCAAGTCTTTCTACTGGCGGGCCACCATCTCAATAGGTT
TTGGAGGCCACCGGCTCCTGCTAGGTCATCGGCATAAGCAACACTCTTTA
CATCGTTGGAATCGACCTCTTCACGAAGAAGCTGTTGGAGTGGTAGGAGA
TCACCTTGCGTTGTTCCTTCCGCTGATGTTATCTCAATACCTCCATCGAC
AAATAAACGTGAATTCCTAGCATAACAATTATGTACATATGCTGCGATTG
CTGGACATAGTGCCTTAATATTACGAAGAAAAGCAGATCGATTAAGAGAG
TTAAAGGCATTTGATGCGTCAACAAGAAGGATTCCGTCAGACCCTTCTTC
AAGAAAAATAGAATACATTGCATGAACTGAGGCCTCACATCCAGCCTGTT
GTCCGGCACAGACCTGTAGAGAACCTGCAGCTTTCATTATGTCCTCTTTC
ACTACTGATATTAAAGCTTTCCCAAAAATGCGACGAATTACTTCTCCTAT
CCCTATCGGTCGGACACCAGGGTCTTTATCTAAATGTATAAGACGACATG
CCAAGAAAGCTTCAATGTCTCTTTCACGTGAATCTAAAGAAAGTGATTGG
CGACACACGGTTTTAAGCATAGTTGGTAGTTCAGTTCGAAATTCTTCCCC
AGTTTTCCCATAGTTTCTTGAGGCAAGAAGCTGTCAATCTGTTCATACAC
TATGGGGTCTATTGGAATGATGGGTTTATTTACTATTGCTTCTGGCTGTG
GTACAACACTTTCAGGGTGAAGGTTGAGTAAAGTGTTTTTGATAGTTTCA
TTTAATCCTAGAACGCCTTTGGTAGATGAGTTTTCCAGTAAACGTAGGGC
TGCACGAATATTTCCCCGAAGCATGTGTTTGGTAAACTCAGCTGTTAAGG
TTTGCTCAGTTTTCGATTTGTTCTTAGTTAGTCTTGATTGGATCTCTCGA
GATTCATTCAATAATTTCTCAAAACTTCCATCTCTCCATAGAATTAGACG
TCGTTGTAGGGCATGGGTGTGGTCCTTGGCTTTTGATCGAGGGTGAGGTT
TTTGGAGGAGGAGGGCAGGCATACACATCATCATTTTTACGGAGACTTCA
GATAAACCGGCTGAGTTAGAGTTCCAATAATTAACGAGTTTCGTACTCTC
GGTAATGAACTCTTTTCCTGCTTTACCCGATGGTAGCAGAAATAGATTTT
TACGAAAATAAACAATTTCCTCGTAGCATGAGTTTATTATATCGTGTAGG
TTGGATAGGGTATGATCTCCCCAGATTTTATTTTCAGTTTTGTTCTGCTC
GGATGTTTCTGGTTGTTGGGTAGGTTGGGTGGTTGATGGTTGGGTAGGTT
TGGTGGTTGATGGTTGCGTAGGTTGGGTGGTTGATGGTTGGGTAGGTTGG
GTGGTCGATGGTTGGCTGGTTGATGGTTTGGTAGATTGGGCTGTTGACGG
TGGCTGAAAATTATCTGTAGAGTTGTTGCTTGGATTAGAGGTGGTGGTGT
TAGGAGGGTTGTTTGATGAGAATTGGTGTTTTTGTTGACGGTTGCTGGCA
CATTTTCTTTTGTGATTTGCTAGTCCTCTCTTTTTGAATGGAAGGTTGCA
TAGATCGCAGTTCACGGTGAGAGATTGTTGTGGTGTCTTTTGAGATGGTT
GTGGTGAGGGCTGAGATAGTGGTAGGATTTTGTCGTTGATGTTGTTATCT
GATTGTTGTTGGTTCGACATATTTCTGGCTTCAGTGGTCAAGATATTAAA
GAAACTCTCTGTTGGCTTAAGCACAGTTTGTTTAATGAGAGATGTTGGTT
TGCAAGCAGGCTTGTGATGAAGATTGTTGTTATTTGGTGAAGACGAAGTT
ACCCTGCTGTACAGAGGGGAGAATCCACATGCTGCTTTTTGATTTTGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000643TCONS_00000643Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000643-proteinTCONS_00000643-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:804530..807978 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.09	0.16	0.06	1.48	1.11	1.05	1.03	0.95	0.78	0.67	0.65	1.27	0.91	0.03	0.05	0.02	0.06	0	0.05	0	0.03	0.01	0.02	1	0.95	0.11	0.11	0.06	0.06