XLOC_000316 (gene) - C. hemisphaerica

Overview
NameXLOC_000316
Unique NameXLOC_000316
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:206887..210787-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000316 ID=XLOC_000316|Name=XLOC_000316|organism=Clytia hemisphaerica|type=gene|length=3901bp|location=Sequence derived from alignment at sc0000002:206887..210787- (Clytia hemisphaerica)
CTTATTGCAGGTGTATTTAAAGGTTTCAAACAAGTGCATTTGACTGAAGT CTGTTAACCAATCAAATTCAAGAAAGCTTTACAACCAGCCAATCAGAATG TTGAAAAAGATAACAAGCGAGCCAATCATATTTCTTTATGCCACCGTGTA CATGATCAACTTGTCCATTCTGCCACAGTTGGTTCTTCAAAAAGTTTGTT TACAAAAACATTATGGAAATTCAACTCTGTGTGGTGAAAAATCTGGGTTG GCAATCACACAAGAGATGAAGAAGGTAAAATTTCAACACATCTCAACTCA TATTAGACTTAGACTGGCACGCCAGTCGGGCTGGAACGGTATCACGCGGG AAAAGTGAGCGTAGGAGTTAGGTAAGCGTAAGAAGAAATTCATTTGTCGG TGGCAAGGGCTGAAATCCCTTAATCAGCAGCCTCTCACCAAGTTTTGATC GTTCTTCTACGCAGCTCCTATTCTAGCAAACGCCCGCTGCCTTTATGCTC CCGCCCTCTGACATGATTAATTAACAGACTAGTTTGCTAGTCTAACTAGA CTATACTCCTGGTGGGGGGGGGTACTTAGACAAAATTGGGTACGGGGACT TGTTGCTGGTCAGGGTCCCTTTTCTAGGCTCTGAAGAAATCAGTAATAGA GTCCCAAGTTTAATAGTTTTCAAGATTTGTACCTGACAGGGTCAACTTTT GGTTATTTTGTATGATTTTCAAGGTGAAATTAGAGCATTTTTCAATTTTT CGTCTCAGTAATTTTTGCAACTTTTCAGGTTCCCATATTTACCAAACATT CATATCTTACAGGTTCTAGTTTTAAGCTCCAGAGGCATTCCCCGTCGGCC GTCAAGGTCTTCCCCCGGGCTTATGCTATAGTCTAACACTTTGTCACCTT CTGAAAAATAATATCCAAGGCGAAGAAAATTCGTGAACGGGTTTTGCTTT CAAAGCGAGTTTAAAGCCGTAGAGTATGCAATGTTGATTAGTCCGAAAAG GGCGTGCAGGTTGTACAGACAGGGACAGACAGAAACCTACCTAGGCAAAA GCATAGGCTTTGCAGATATACTGCAAAGATCACGGCACAAAACCCACGTC CGATCTTTTAATAAAATATAGAAAAATGACACAATCTTACGCATATCGAG AATCTTCGCTAAAAATGAGTTTGCGAGTTTGAGGCTCAAATCAAATCTAT CTATCAGGTTTATAAGTCTTGTGTGTTGAAATTTTGTTATTACATTTCAC AATTTTATGATATTATTGAATTTTAGGAAACGTCTCATTGGTGGTTCGCT ATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCATCTGGGG ACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTGATTCCAA TAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTATTATATC AATTCTTCGATCATTTATTTGTGTTTTGGAATGTTTTTGGCGTGTTTTTT TGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATTGCAGATG TTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGCGCTTATA GATTGTGCTGTTAATCTAGCTGGGTTACCTGCAGGGCTTTTCGCTGGTCA GCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCGATCGGAA TCAATCTGTTGTTGTTAGCTTACATCANTATGCTATAGTCTAACACTTTG TCACCTTCTGAAAAATAATATCCAAGGCGAAGAAAATTCGTGAACGGGTT TTGCTTTCAAAGCGAGTTTAAAGCCGTAGAGTATGCAATGTTGATTAGTC CGAAAAGGGCGTGCAGGTTGTACAGACAGGGACAGACAGAAACCTACCTA GGCAAAAGCATAGGCTTTGCAGATATACTGCAAAGATCACGGCACAAAAC CCACGTCCGATCTTTTAATAAAATATAGAAAAATGACACAATCTTGCGCA TATCGAGAATCTTCGCTAAAAATGAGTTTGCGAGTTTGAGGCTCAAATCA AATCTATCTATCAGGTTTATAAGTCTTGTGTGTTGAAATTTTGTTATTAC ATTTCACAATTTTATGATATTATTGAATTTTAGGAAACGTCTCATTGGTG GTTCGCTATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCA TCTGGGGACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTG ATTCCAATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTA TTATATCAATTCTTCGATCATTTATTTGTGTTTTGGAATGTTTTTGGCGT GTTTTTTTGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATT GCAGATGTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGC GCTTATAGATTGTGCTGTTAATCTAGCTGGGCTACCTGCAGGGCTTTTCG CTGGTCAGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCG ATCGGAATCAATCTGTTGTTGTTAGCTTACATCGTTTTTCTTTTACCCGA CCCAAGAGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAGAATCAA CATCTTCGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAATGAAAGC ATCTCAGATAACTCAAGCAATGTTTCCAGTAACATTGACAGAGTGCCCGA CTCTTCAAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCACCTCAGT TAGACAAGAAACCAATCACTTGTGATCTCTTTAAACCGCACAAGCAAATC TACCTTGTTTACAATCTATTATCGTGCAAAGAAAGGAGACATTTAATTCT ACCACCCCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATTGGAGAAC TAACCATTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTTCACTCCA GNTTATTGGAGAACTAACCATTACGTCATTATATCTCAAAAGTGATCCAC TAGCCTTCACTCCAGACTACATCGGATATTATTACGCCTCACAGGCTGTT ATTCGTAGCCTTGGAATTCTCCTGGTGACACAATTCGCTTATCGAGTTTT AAAAGCGTCAGATGTTAACGTTTTATTATTTGGGATTGCTACACAAATTA TGTGTTATGTTCTTATCGGGTTTTCTCGGGATACGTTATCGGTATTCATG GCAAATATTATCGGTTTCGGTTTAACAGTCGCGCTATCGTTGTCTAGAAG CTATACATCAAAACATGTACCACCGGAGCAAGTTGGTACCCTGATGGCGG CATTCGAATCTATCGACGCCCTATCATTTACGACAAACTTGATGTCGATT GAAGTTTACAATGCAACTCTAGATCGTTATTCAGGAGCTGTATTTCTCTT CTTAGCTGGCTGCTCAAGCGTTGGTTTTTGTATAACGGTGGCCAACAAAA TTTATTTAAAGCGAATACGAAATGAACTGAACAGCGAAATGAATGAAGCT CTTAATGAAAATTTTAGAACTTCGGATGCTTGATATATATTTATTCTTAA ACTTGACTTTTTGTTTTAATCTGCATATAATATTTTTGTTTTGTGAAGCC TAAATTTGTGATAATATTCTGATTTTTAATTTAGCTGTGATATTCGAATA GTTTATTCTTATTGAAATGTGACGAATTGTCTGACTAGGCTGAGAATATA GCCTGGAAGCCATCATACCTCTCCAAAATCGAAATATCCGAATAAAAAAT GTCATTCTAGGTCGAACTTTAAATTCTGCAAAGCGCTAAAATACCCAGAA TCGCTAGCATATTTTGACCTGAATTGTAGATCTTGACTAGATAGATTTCC A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000512TCONS_00000512Clytia hemisphaericatranscript
TCONS_00000511TCONS_00000511Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000511-proteinTCONS_00000511-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:206887..210787 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58 0.57 0.18 0.39 0.18 0.25 2.7 3.35 1.81 2.08 2.67 1.18 2.19 2.39 2.03 1.47 2.76 4.63 3.81 2.82 10.89 8.45 2.04 3.32 4.74 4.86 1.04 1.28 0.06 0.08