XLOC_000293 (gene) - C. hemisphaerica

Overview
NameXLOC_000293
Unique NameXLOC_000293
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1099446..1103490+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000293 ID=XLOC_000293|Name=XLOC_000293|organism=Clytia hemisphaerica|type=gene|length=4045bp|location=Sequence derived from alignment at sc0000002:1099446..1103490+ (Clytia hemisphaerica)
CCTGGGTACCTATTCAGTATGATTCCTttgaacaaaagaagaaaaggaaa
aggTTTGGCAGTGGAAAATTCATATAAAACCTTCTTGAACTAGGACCATG
AAGAACATTTATCATTTCAAAAACTTGCTTAACTGAGAGAGAAGAAGTGT
ATTCTAGAAATGAAGTTATTGGCATCTTTGGGATTTGTCCTGCTCATTGC
AGCTCTTCAAGCAGGTATGCATNTTGAAAATGAAGTTATTGGCATCTTTG
GGATTTGTCCTGCTCATTGCAGCTCTTCAAGCAGGTATGCATGGTTAATA
AATGAACtcattcgaaaaaaaacttgacCCCAGAGATATTTTTGTTCTCC
TGACTAAAACAATGTGATAAGTGTTTCTCCTCGGTGTCTCGTCGATACTA
GTACCTCGACCAAAagccaaatatttcattttcaccaCGCAAAAAGCGAT
GGTCGATATTTAAATTAGTAGAGAGAATAATAATAAGGCATTTAAAATGT
CTTTTTGGGGGAAGGCATTCATAACGAAGTTATGACTTAGTTTATGACTA
GTTTATCAAGTAAGTTATCAGAGATCGGCAACCTTGTAAGCACTTCGATT
CTCTCTAAAATCACATGATCTCGAGATACAGACAACTCTCTCTCTAATCC
GACCCTTAATAGTTCGAATCTTTATGTAATTCGAAGTGAAACATTGGTTC
CCACAGTCAGAAGGTAGTGTTAAATTCTCTATTtaattcaaatatttcct
aAGGCGAAAGGatttcttggtcccttgaagatcgaattagagagtcaaCT
ACGATGATTTAATAAGAAGTCTAATTGATTCTTTGTATACTAATTACCTA
GATGCTGCTGAAAAATGTCAGTCAGAGGTGGTGGTCACCTTAGATTTATC
AGATACAATCACCatagaagaattgaagcaagtTAAAAACTTTGTCAAAA
ATGTCGGTAAAGAACTCTCCAAAAATAAAGATAACCGAGTTGGAGTGGCC
TCTTTTGCTGAGACAGCAAAATCTGAAGCTGAATGTTCACAAGGTACAAT
CAGATATGATCAATTCTCATCACAAGTCAATGCAATCCAAAAATATGGTG
AATTTACCAATATTGAGGCTGGTTTATTGAAAGCTGAAGCTATGTTAGAT
CGCGCAGGATGCTCCTTGAGTCGACCGGGACGTCATATCATCCTCTTGGT
TTCTGATGGTAATGGCAACTATGGTTATGAATCTTCATTAATGCGAGAAG
CTGAAAGAATCAGAAATAAAGGGatcaaaattttctcacttGGTATCCAG
AACCAACATTACCGCGAAGGTGTCTTGACTCGAATCTCTGGTCATTCTGA
ATACGTCAAACCAGTTGCTGGTTTTGAATCTTTGAAAGATATCGACTTCC
GACAAATCATCGACAAAATCTCATGTTTTGCCAACGTTGTCAAACCAACA
GCAAAAATAACCACAACTACTCCTAAACCAACAACAACGACAACCGACGA
GCCAACGACAACCACCGACTATTACACAACAACTACCGAAGAACCAACGA
CAACCACCGACTATTACACAACAACCACCGAGGAGCCAACGACAACCACC
GAAGAAATAACGACAACGACCGAAGAGCCAACAACAACCACCGAATACTA
CACAACAACGACCGAGGAACCAACGACAACGACCGAAGAAATAACGACAA
CAACCGAGGAACCAACGACCACCGACTATTACACGACAACCACCGAACCA
ATCACGACTACCGAAGaaatcacaacaacaacaacaaagaaacCCATGCC
AGTACCAAAAAGTAGGAAATGCATTTATGTTTTCACTCACGCAACACGTC
TTTATCTACAACATAAGTTAAACGTAGGCAATCACCTGTTTCAATAATTT
CCTCCACTTAGATTTCACAACCtagattttaatttcttaattccaaattt
ttattatttctagCATGCGATTGTGTTATTCCAAAAGACTTCATGCCATG
CTTAACCTGGACCAAAGCTGATATCTTGACCAACTTCGAGGGTAAGTCTT
CTTTCCACAACCCATCATTTTATTAAATCCTTCTTACATGCCTCATTTTA
ATGTGACGCTCCTACCACACTCTTTACTTCGGTGCAAACCTTTTTCTACA
GCCCTTTGtatctttttattgaagttGTTCCACTTACATTCCCTTACACT
TTCACATTGGTGTAAAACCATCCATATCCCTTATATATTGTGCAAAACCA
ATTCCTCATCCTTAACATCGGTTGGTGTTTATGTCTTTTTAAATCCTTTA
TATTGGTGAAAAACTCTGACCACATGCCTTATTACCTTGGAGTAAAACCT
TCTCTACCTAACTTACATTGGTCTAAAACCCTCTCTTCGTCCGTTACGTT
GGATTGGTGTAAATTTCTTTCCACACCCTTTACATTGGTGTAAATCTCTT
TCCACATTCCTTACATTGATGTAAAACACTCTCTAAACTCCTTTCGTGGA
TGCAAAACCATTTCATAACCCCTTACATTGGTGTAAATTTCTTTCCACAC
CCTTTACATTGGTGTAAATCTCTTTCCACATTCCTTACATTGTTGTAAAA
CCCTCTCTTAAATTCCTTCTTTGGATACAAAACCATTTCATAACCCCTTA
CATTGGTGTAAATTTATTTCCACACCCTTTACATTCGTTACAGGTGACTG
TGTTGTTGACAAGTTTAAGAAAGCTTTGGAATACATCAACCACCGTGCAA
TGGCCATCGTCGGCAAATTGCTTGCATTCAGACAATGTCAAAAACACATT
CAAGATCACATCATCACCACCTCCATCAAACAATTCGGTTCAGGACTTCC
TAGTTCACCAATCATTGACAAGTCTTCAGTATTGCAGAGATTGTTCTTAA
AAGAATCACAATGTGAATTTAACATTCGTGGTCGTTTGATGCAATGGAAA
TTACAATTGATGACTGTCAGACAAATGATTGAACATGAAATCTTGTTCCA
ACAAAATGGATTCTTCAGTGCTTTTGACTGTAAGTAGACTAATAGATTGG
GCTATGCCAGAAAAtatccgtacatggggggggcTTGGGttgaggatata
ttgtccgggaggtagcgaaaaatcatcaaaatttgcttgTCCGTaaggta
aatttgctctgtccggggggtcaactgatgcttgtccggggggtaaaacc
tGTTGTCCGGGGGAGggcaaaagtcactttgtccagGCGGTAAATCACTG
ataattgttatatcctccatctccccatattcaaattttttctggaaaag
cccatttttagTTAGAATTATCAAGATTGCAAGCGTTGGACTCCCTTTGA
TTCATATTTGGAATAGGCAAGCGCTCGTTGTGAACTGGTCCGAAACGTAA
TGTATTTGTGCCATTTTTCAGGTCTCCCtttatcaaaactaatcatcCAT
GTCTATCAAACAGAAAGGGTGTCTTTAATAGATTGCACTATCAATGAATG
AATTACGTAACAACTATGATAAATTGAACATAAGCTTTATGATGAAGAAA
GGAGGTGCGCTTTAATGCTCACACGGTAGAACAAAGAAAAGTATTTCGTA
AAACatatttttgctttgttttgaaaatgctATGTAAGCAAATGATAGGT
AAGTTAAATGTAGAATTTGTCCTTTAACGGGTTCaggaaatcaatttttt
tcttttcttttcagccGTTCCATCTGGTAAAGTGAACACTGGTGCATTGT
TGAagaaaatgatgatgatgaagaaaaaataaattaccaaaaaaatgaaa
atgaaactttttgaaaagtcaCGATGTCTAATTTATTAATTAGTTATTAT
TATGAATGAAGACTAAAGAAATTGttataaaatcttattaatttatcaac
acaaaacaaaaattattttttatatgcattttatacttttacttgcatta
atttttttgaaaaaataaaattttatttatttgcaatttaaaaaaaatat
ttctgttAGATGAGATTCTTAgttcatgaaaaataaagatcttgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000464TCONS_00000464Clytia hemisphaericatranscript
TCONS_00000465TCONS_00000465Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000465-proteinTCONS_00000465-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1099446..1103490 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.02	0.03	0	0.12	0.1	0	0.03	0	0.1	0	0.02	3.04	20.54	4.84	14.8	0.12	0.04	0	0.05	0	0	0	0	0	0	0	0	0	0