|
|
Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000234:40941..45483+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114225 ID=BlTCONS00114225|Name=BlTCONS00114225|organism=Branchiostoma lanceolatum|type=transcript|length=4543bp|location=Sequence derived from alignment at Sc0000234:40941..45483+ (Branchiostoma lanceolatum)
GTGAACTTCCGGTCTGACGGGCTAGCTACACAGGCAAGCGACTTGGAAGA
CAGATTTCCTTGATAGACGTGACTGGAGTAGTAAAAGAAAAGGTTTGTAC
CTCAGAAAAAAAGACGTTTGGGCTGCTTCTTCTATGAAATGTTATGATCC
CGTAAATTTGAAGTGAGGTGATTAATTTCAGAAAAAGTAACGTAAACAAA
ACAAATGATGCAATAAGCCAATATAGGAGCGTCCAATATGAGGAGTTGGG
AGGGGGGCGTGTGATAGTACCATTCTCTCTTTGTAAGTTGATATGATAGT
GTCTTTTATTGTGGGGACTAGCTTTCTTTATAGCAAATTATCAACAGTCT
GAAACATATTGAGTATCACTGCATATTCAGCACCTAGGACAGGGACAGTA
GGGTCAGACGCAAGTTTTTTTTTAAATTTCATTGCCCATAAAAATNCAAG
TTTTTTTTTTTTAAATTTCATTGCCCATAAAAATCTATTGGTGGCATGAT
CAGACAAGAAATTTGCCAAGGCTTAAGGAGAACGTAAATGGTGGGACCTG
ATAGAGCTTTGCTTGTGGAGCAAGACACTTTTTTTCAGAATCAAATTCGG
ACTTACCATTGTCAAAAGATGGCCACAGCAAGTAAATTTTCTGGACGACA
TCAGTGCGCGCATTGATTTTTGCCCAATTTTGAAATAAAAAACAAAAACT
TTTTCACCCCTAAGCAATGGTCAATATACCATAAATGGGGCAAAATGACC
CGAACGTTTGTCAGTTCCATCGAAAAATGGTTCTACATACCATAACATTT
GCACAGTTTGGAATGTTGAAAAATTTGTACAAATGTGTTGTGTATGCAAG
CTGTAAAAAATTACACCGTAGCTGTTTTGATAGGTGATATAATATCTCAG
AAAATACCCCTATCTTGACAGAATTGTGGAACAAGTCATTAATCTCGTAA
CCTTTTTTGGGTGTGCGCTGATCAGGTTTCCCCAAGCAGATATTAGGAGA
AGTGTCGTCCTTTGTTTAACTGCTTTAAACCACCTGGTGTTTGATGCCTG
GTTCTTGATCTTGATTGGGTACTGGGCAACACCCCTCTTGTTGGGGTAAA
GCGCCCAGGGGTGTGTGATGCGCTGTTATTGTCCTCGCAGGTGCAGGAGA
CCAGCCTCCTTGAACTTGGGATGATCAGCTGTGTCTGTGACGTCCTGAGG
TAGTGAATTCCAGTCTCTCACGGTTTAAGGGGAAAATGAGTATTCTATAA
TCCTTATATAAATTTTGGTAGAGCCTTATATAAATTTTGATTTGAGTGTC
GCGATTGTCGTGGGGCAGGCATCAAATGAGTTTCGACCGGTAGGGCTATC
TTGTGGTGTCTTGCTCTCTGCAGTAATGTGGGTCTATTTGCTGTCCTTCT
ATTCTTTAAAGTATCCCACCTCAAATTGGAGTGTAGTATGAGTTTGTGAC
AAATCTGGCCGCTCTTTTCTGAACAGCTTCTAGCTTAGAAATATGCTCTT
TGTGGTGAGGGTGCCAGGCAGTGCTGGAGTACTCTAGATGAGGTCTAACA
AGACTTGTATATGCATTTATCTTTAGTTAACTGTTCCGTTTCACAAAACG
TTTCACAAAATGTTCCAATTAAGGACTCCAAGCAGATGTTAGGATGTGGC
TTCCTACATGCACTGCATGTAACTGCCTGTGTCTGAGATGGAGAGGAATA
TTGATAGATATCACTTATGCAAATGGAGACTTAATTTGCATAATTGATAA
GAAAAAACTTATTCCATTGTAGCGAAATATGGGAATTTCATTATTGTGGC
ATTTGGAAGTCAAGTGAAGTTGAACAGTATTATTAGATATGAATCATGCG
CAGTGTTTGAAAAACTGTGCCAGCAGTCTGCAGTAAGATTTTCAAGATTG
CAGTAGAAAAATGAAAATTAAATAACCTGCAATTTTGAAGAATGGAAAAA
ATCAGGCTTGAGATTCAATGGTTCTCAACTTAGCAAACTGAATATTTCAA
AGAGAATAACTGAACACAGGAATGATGTATTTCTATGATACTGTATTCAG
CATGCAGGTATGGATTTTGTAATTTTTTGTGGAATTCCAGATGTGTGTCA
TTTGTTTCTCCAGGTACGGTGAGACCTGTGGGACTTAACCCTCCCGACAT
GACCGAGCCTTTGGGGAAGATGGGGCCTATCTTGCAAGGAGACTCCGGGT
CTCGGGCCATTTGGACCTCCGGTCCCTCGCTAGAAATCCTTTGGTCTGTA
GGGCCGATCTATCTAAACATTGCAGAACCACCTGAGCGTCCTCAGACGAA
CATTCGGGGCAAGTCAGATAAAGGTAAGGCTACCACTTACCCTGTGTTCT
GATGTTTCAAGATGTGATTTCACCTACTGGAAATGCATTCAAGTTAGCGT
GGTTGTTATTTTGCGCTAAGGTGAAAATGGGGTGTTCGCGGTGGTTTTAA
GTTTGCAGCAGCACTATAGTCACATACTGCTGCAGTATTGGACAAAAATG
TTTGCGGTGGTTTTAAGTTTGCGGTGAAACGGTCGCCGTGAAAACAGCGT
ACATAAAACCACCGCGAACGTTTCTGCATTTACAGTACATAAGAAGTTCA
CCCGAATATTCATGGTGTAAATAGTGGGGTCTATACCTTTCAACAGTTTT
CGTCTTTGTAAACCGATGAGCGTACTGTACTATACACACAAACATACATC
GATCACAAAATGAAAAGTCTGATATAGGCTATACCGTATTCCGATGAAAA
ACTATTATCGAATGTTACATACAATTTTGATCAGGTCAATGACATTCTGT
ACTATCCCAGTGTCTGTTACATTTTCCACAGTGTCTTGGCCATGAGGCTA
TACGGAATGCCGTGGCATCTGCTACAAGGTGTTCGAAATAAAGCCGAGCT
TCAGAGAAGCGGCCGCGACCTGTCGTGCAGGCGGTGGTACCCGCGTCATG
CCCCGAGATGCCGAGACCAACGACTTCCTCATCTCCTTGTATAGACCTTT
CTCATGCGGCGGACGTGATAGAATGAAAACAAGGCCCTTGTAGCAAACAT
TAGACCAATTCTAACTGTCAATCACAATTAGCAGTTTAGCCAATGATTAT
CTGATAATTAGAGAATCGACCAAAGAGGAAGTGGCTGCATGACTGTCAAA
TATTTGCATTTCTATGTTTTTATTTTGCATTTCTCGAAGCTCTAAATTTC
TGCATCTTTTTTTGGGCATTTCATTAGTTATAATTTGATTACTTGGATAT
CACATTTTAAGACTTAATGCGATTTAGGAGGAAAACTAAAGCTGTACACT
ATTTTTGCTTCTTTGCCTCATTTGCCTCGTCTTCTTTCTATCATGTCCGC
CGCGTGACAAACGTGTATTGTAAGCCAAGGATTGTCCAGCTGGAGTTTTA
CTTCAGGTTTGGCCTCCACCACCAATGTTAAGAATCAAGAAGAAATGTTT
TGTGTGGGAGGTGTTAAACACCAGGGACAGGAATTTTTGGCTACATCTGT
AAAGTGTTCAGCACCAAGGACAGGAATGTTTGGTTAGTTGTGGATAGAGT
TAAGAAACAAAAATGCTTGGCGACATGTGGAAAGTGTTCAGCACCAAGGA
CAGGAATGTTTGGCTATGTGTGGATGGTGTTCAGCACCAAGGACAGGAAT
GTTTGGCTATGTGTGGATGGTGTTCAGCACCAAGGACAGGAATGTTTGGC
TATGTGTGGATGGTGTTCAGCACCAAGGACAGGAATGTTTGGCTATGTGT
GGATGGTGTTCAGCACCAAGGACAGGNGGTGACTTATGGAGCTATTGGCA
TGTTACATACTTAGTTACGCACCATGCAATGATGTAAAGCTATGATATGA
AGTAACGGAAACATCATGTAACGTTACAGTGATTTTCAAAATCAATAAAG
AAATGGTGTTTTTATGAAATAGCTCATCTTTGGCTTTACTGGCTACTGAC
TTTGGCAATATCACTGTTATTTTTAGAAATGTTCTATACTTACTTAATCA
ATACAATTCAATCTCTACAACTGTATAAGATTCAGAGATTACTTCCAGAC
GTTTTGAATGATTAGATTCCAGCATATCACATGAATAAATCATGTTAATC
ACCGTAGCATTCACTGTTGCAGCCTTATTTTGGACAAATAGATTTACATG
ACATACATTGTATGTCATACCTGGGCTGCAAAAATGTTCGATAAGGGTGT
TCCGCATTGTGTGATAATTTACGTTATGTCATACCTGGGCCGCGAAAACG
TTTGATTCGAGTGTTCCAGACCAGGTGATAACTTGGGTTATCACATGGGC
TTCTATTTTTATCACTTGGGCTTCCATAGAATATTTCCAATGCATTTCGA
GTCCGACGCTGTAATAAAATTCAAATACTGAATTCGGAGAATGAATTCCA
GCTTTTAAAAGTTTTTGTTAAAGACACCAAATTTTCTCAACTTCTGGAAC
ATTTCGCATTGAAATGTGTGTTTTCTAGGTTGGGTATGACATACATGTAA
ATGAAATACAACACAGTCTATTCTGCATCACCCTCGGTCCCAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114225-exon-Sc0000234-1564993656:40941..41032 | BlTCONS00114225-exon-Sc0000234-1564993656:40941..41032 | Branchiostoma lanceolatum | exon |
| BlTCONS00114225-exon-Sc0000234-1564993656:43054..43263 | BlTCONS00114225-exon-Sc0000234-1564993656:43054..43263 | Branchiostoma lanceolatum | exon |
| BlTCONS00114225-exon-Sc0000234-1564993656:43772..45483 | BlTCONS00114225-exon-Sc0000234-1564993656:43772..45483 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000234 | genome | Sc0000234:40941..45483 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056030 |
|
