|
|
Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000233:327678..332972- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00114191 ID=BlTCONS00114191|Name=BlTCONS00114191|organism=Branchiostoma lanceolatum|type=transcript|length=5295bp|location=Sequence derived from alignment at Sc0000233:327678..332972- (Branchiostoma lanceolatum)
GAGACCCCCCGCAGAGCCCAGCCGACGTCCTGCTCAGACGAGCGCCGTTT
CCGAACTCGACTGCGCAGCCATTCAGGACTATAATCACCAACTTTGACCA
CGGTTTTTATACCTTTAACGTAAGTATAAATTCATATAACTCAGGCATGA
CATAGCTAGAAATGTCCCCTACTGGGAACCGTTTTCAGATTTCTCGTATC
TGTGACAAAAGTTAAGTAAAAGTGCTGGAAAGTGAGGGTACACCGTTAGT
TGTCTTTGTTCCTCGCGCAGACGCACTCAGTAGATTTTCAGACGACCCGA
TCGGGGTTGAGTTTGGAGTCAACTTCGGCGTCCGTTTACTCGCCAACCGC
TCAAAAATGAAGAAAGATTTCACCACACAAACGTGAAGCACTTCTTCCCC
TTCGGTTCTACGGGCTAACTTGTGGAAATCCGTAAGGTTAAACTGTAGGA
ATCGGCCGGGAATGCGGAGAGTCGCGGGCGAGAGTTTTTTGTTTATCCCT
CCATGTCTGTCTGCGCAGACGCACACACCTGGGCACATTCCCCGACACCT
TCCCGCCGCTGCACCGGCGCAGTAGAGCCGCCGCATGCGTCCTTGGCCCG
CCAGCTTTTCTGCCAGGCAAATTTCCTGACTAAAACCCCGAATACACGGC
CGTTACCGCCTTCCACAGCGGCTCTATCGGCCCGGGTTGAGCCGGCGACC
CCAGACGAAATCGGAGCCCTTCCATGATGGCCGAAATGCCAGCTATGCGT
GCCCGCGCGTCATCCCCGCACGGACATTTTGGGCTGACTCTGACAGAAAA
TGTCGTCTGATCCGACTGTTTCCCCCTCTGGCTGTGGTGTATTCTATATG
TACACTCCCCAAAGCACCACGCAGTCGCAAATAGTCGACAGGATCGTGCG
CAAAGTCGCAGCAAATCCAGATCAGATAAACGGGTTGACTGGGAGGGGGG
CCCTGGGGTGTGGGATCAGGCCATGGCGGTCATGAGGATGAACCTATGTC
ACAGAAATTATGAAATTAAATAATATTATGTCACACACTTGTGCCTGTTT
GTCATTTACTGGTCATCTTGTAGTTCTCTTCCATAGGTTCCCACTAATTT
TTTTTCTCAGCAGTGTAACCTGTTATAGATATTGAATTTTACATAATAAC
CACTAAATAATTGATGCTGCGACCCACAATCATGTTCTTGTAAATTATTA
ATTTAATCATGATTTTTAGTCTGAGCGCAGTAGAGAAAAATAAGGCAACC
CGTATATATATATATATGTAGCAGTTGTGTCAAATCTGGCTAGGAATTTT
CATTTTGGTAATTAATTAACTGCGTCATTGTTCGAAGAATATGCTTTTCT
CATTCATAATATTTGTTTTGCCAGGACTTTATAGTTATACTGTCTCGATT
ACTTAACGTTACCTAGCATTGTGACTCCAAAATACAGGTGCAAGGAGTGA
TCAATAAGTTTGTGGCCTCACCCCGAGATATTAGGTGTAACGTTACCACT
CAAATGTTGGGGCATATATTCTTTCTTTCCTTTCTTTAATTAAGTATAAA
GCATTTTATGAATGTCTACTAAAATTTACATCATTGTGGTCGAACACTTT
GCACGAGACGAGTAACTTTACAGTAGTAGGTGTGACCGTGTGAGAGAAGG
AAAAACCATGGATAATTGAGCTGCAAACTAAGGTGTGCTGGTCAACTTGC
AGTCATATCTAGTAGATATACAAACTCCGAAGGTATTCCTCAAGAAACAT
GATGACAATGTCTTCTTAGATTTCATGACATGACGAACACGACCCACACA
GCTCTGATCAAGTTTACCCTTGCATGTTTTTCTCACCACTTAAGGTCTCA
TTCATGATCATGAGTTTTTTCGGCCCATAGGATTACATGTTATAATACGT
GTTTTACATGGGTGCGTTCGTAATGAAGATATAGAAAATGTGCCAATGTT
TTTCATTCCATGTTGAGAACAGTTACCCTAGATTATGTAAAAAAATTGAC
AACATTTTCACTACATACAATCTCTTTTTATAGCAATTACAAACTGCACT
TGGCTACACCCCCACAAAGCCACTTTCCAGCTGTAAGCGCCGGACCGATT
CACACACAATGCCCGGCCTGTGTACGTCCGACCTCGCGCGCGGCTGCCGA
ACTTTGCCTGCTAAGTTCTTCAGATACAAACAAGCTTTCATCAGTTTGAC
GTTTGAGATAGGTTGGCCTAGCCAAAAGGGAATTTCCCACCGATATACAC
ACACGTTCATGCAGCCGTTCATTTTTTTGGGCCACGCACTCTTTTAGCAT
ACCCACTCGGAGTAATACAGAAATGAGACCTTAAACCTATAGATTTTCAC
AAGGACATCAGCTGGAAAGTAATTATGATGACTATATTGATTTGAAATTT
GGTGGATATTGATAAAAGGCTTCATACTTTATATAGAAAAAAATGTAATT
GTGTCCCAGGATTTGCTACACTGCATTTATGTCTACATGCATTCTCACAG
TGATTGCTTTACCAGGCGGTATAGAAAATAAAGCAGAGACAACTCTATCA
CATATCGCATGAGATACATTTATAAATGCTTCAGGTTACTTATTGGGTTG
AAGGGCACACCCCGGTTTATTTTGGGTTTCAATTGGAGACTGCACACCCT
CGAGTGTAGGTACAGTCTCTTCCATGGAATTATTTTGAAGCAAAGCAAAG
TTCTGTGTATTGCGTGAAAGGATATTTCTTCTGCTACAACTTACAAGACC
AACTTAGTTTTGTTTCTTCAATCTCTAGATCTCTGATTTTGGTAAATTAG
AAGAAAAAAAACATTATTTTCAAAAATATACAAAAATAATCTGCAAAATT
GGAAATTTGATTTCAAAAAAATTTTCGGCAAAAACGATCGATGTTGTCAA
GGAGGATGACTTGTTGGGGATTTTGAGTGGGCACGATGTATTTGTTGGAC
TGCCGACGGGGGCCGGTAAAACATTTTGTTTTCAGGCCATACCGCCCTGC
ATCAACATGCTGTTCGAAACCGTTCATTGTCGTCATAAGCCCCCCTTACA
GCATTGATCGATGACCAGGTAAAGTTTGGCTCCACTCAACAAGGAAGAAA
ATGTCGTCTGTATATTAAGATATTCGCACTCGTTCCCGCTCGATCGCTGC
AGATTAACCGCACAGTAACGTAACTAGCGCGTAAACAGTAATCGTGTTAT
ATTTGGTCGTTGTCAACCATAGCAAAAGAATTTATTTTAAATTATATTTC
GGCCAAACAAAACACAGACGATACAAGCATCTTATTCTTAACACATAATA
TAATTTTTGGTGTGTTTTGCTGTCACCCCTCATTGAACTCTTGTCCCAGA
CACTACCGGCTTCTCTGTACACACGCTGGTTGCGCCCCACTGGGCGCTGG
TCGATTTATGACCTAAATGATCTTCAGCGCTGAGCTAGTTTCTTTGTACA
AATAAATTGGGGGATTAATTTGATACCGTTTGTAGATGCCGAGTCCTTAT
AGGCTCCATAGGTCTCAAACTGTAACTCCTGTTATCGGTCTCTTTGGACA
ATTTCTACTATTTTTCCAGTGACCTGTGGAGCCTGGTAGAGGCTAAGGGG
TATGCACGGTAAAGCCTTTTTCGTAAGAACAGTCTGAGCATGTCAATATT
TCTGTCATAGGTCTGTCACCATGATGATCAACGAGATGATGAGTGACGCG
ATGCGCGTCAGCGACGCGTCATCGGACGAGGGGGGCAACTCGTTTGACGA
TTCCGGCCTCCTCAGCCCCAATGATAAGGACGAGGTGACAGCGCAATTAG
CTAACGCAGGTAAGAACTTCTTGTTTACAAATATTCATACTTAACCAGGA
AAACACATCCTTACGTCATTAACATTTACTAAATGACTGTTGCTCTATAG
GTCTATAGCTGCTTGTACTTTTGAAAACTGGAAAAAAATACACATGAAAT
ACACCACCGAATTGAGGACAAAGCAGTAAAAACGCTTATTGTTGTACTGT
AATTATATAAAGGTGAGTCTTAAATTCTTGTCATTTCATTTTGTTGGACG
CTATGCTGCCCCTATTGCTGACAGCTGATAATGATGATTTCAAAGCAGAA
GAAGTTTAATCTTGTAAGAAAATTGCCAAGCAGACTTTGAATGCTCCAAG
CATACTTAAAGTTAATTTTAAGAATTGGATACATGCTTAAAGCCGATAAC
TGGTATCATATTGATGTTCAGGTCCGGTGGGCGTGGCTGCAGCTGCTGCC
ATAGCAACCGGCAGGAAGAGGAAACGTCCACACCAGTTTGAGACAAACCC
TTCCATCAGGAAGAGGCAACAGACTCGACTTACAAGGTTGGTAGTTACAT
AACTGTCCTGAATTCTGCATTTACCTGTACATTGATGTGGTAACTTCTGA
TTACAGATCAGAGGCTAGGGTTTTATTTTCAGGTGCTGCCTCCTGGTGTA
TAGTTTGGGTACTGCAGTGTAATCTGATGTTGTGTTACAATGTATATCAT
GTGTAGGAAGCTAAAGAACTGATAGGTGAGTACTTTGTCAGGGATGGACA
GCAGGTGTTGGTGTTGTGCTGCCTCCTGGTGTATAGTTTGAGTACTGCAG
TGTAATCTGATGTCGTGCTGTATCATGTGTAGGAAGCTGAAGAACCTGAT
AGATGAATACATCATCAGGGTTGGACAGCAGGCCGTGGTGTTGTGCTGCC
ACCTGGTGTAATGTTTTGGTACTGCAGTGTAATGTGATGTTGTGTTGTAT
CATGTGTAGGAAGCTGAAGAATCTGATAGATAAGTACATCATCAGGGTTG
GACAGCAGGCCGTGGTGTTGTGCTGCCTCCTGGTGTAATGTTTTGGTACT
GCAGTGTAATCTGATGTTTTTTGTATCATGTGTAGGAAGTTGAAGAACCT
GATAGATGAGTACATCATCAGGGTTGGACAGCAGGCCGTGGTGTTGTGCT
GCCTCCTGGTGTATAGTTTGGGTACTGCAGCATAATCTGATGTTGTATAT
CATGTGTAGGAAGCTGAAGAACCTGATAGATGAGTACATCATCAGGGTTG
GACAGCAGGCCGTGGTGTTATGCTGCCTCCTGGTGTATAGTTTGAGTACT
GCAGCGTAATCTGATGTTGTGTTGTATCATGTGTAGGAAGCTGAAGAATC
CGATAGATGAGTACATCATCAGGGTTGGACAGCAGGTGTTGGTGTTGTGC
TGCCTCCTGGTGTATAGTTTGGGTACTGCAGTGTAATCTGATGTTGTGTT
GTAATTTGTATCATGTGTAGGAAGCTGAAGAACCTGATAGATGAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00114191-exon-Sc0000233-1564993656:332854..332972 | BlTCONS00114191-exon-Sc0000233-1564993656:332854..332972 | Branchiostoma lanceolatum | exon |
| BlTCONS00114191-exon-Sc0000233-1564993656:329164..329312 | BlTCONS00114191-exon-Sc0000233-1564993656:329164..329312 | Branchiostoma lanceolatum | exon |
| BlTCONS00114191-exon-Sc0000233-1564993656:328637..328751 | BlTCONS00114191-exon-Sc0000233-1564993656:328637..328751 | Branchiostoma lanceolatum | exon |
| BlTCONS00114191-exon-Sc0000233-1564993656:327678..327702 | BlTCONS00114191-exon-Sc0000233-1564993656:327678..327702 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000233 | genome | Sc0000233:327678..332972 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF056015 |
|
