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Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000232:18252..29116+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113952 ID=BlTCONS00113952|Name=BlTCONS00113952|organism=Branchiostoma lanceolatum|type=transcript|length=10865bp|location=Sequence derived from alignment at Sc0000232:18252..29116+ (Branchiostoma lanceolatum)
AAAACCTAACCCGGATAACCCCACTTTCACCTCTTCCCATCTTCTATCAG
TCATCACCACGCTCCTTCGGAATGTTTCGGATGAATCCGCCGACGTGTGC
ACTAGGGCTTGTCTGTCTCACTGTACTTATATGGTATTCACAGGTGGACT
CATTAGTCTGATCCAATCAGTGCACAGTGGGAATAGTAGCCTATCCCCAC
TGCGCACTCATTGGATCATCCTTTATGAGTAATGGGGTCCACGCCTTTGC
GCACCCCATCTACTCTCCTTCTTGTCCCTATCTATTCCTCACATTGTCCT
ATTCCTTCTCCTCTTATTTCCCACTCTCATCCTCTTATAATTCTTCCCTC
ACTTATTCCACCACTTTCCTACTGTGTTACCTCCCTATAGTTCTTCGTCC
ACTGTCTCTCTTTCTACCTCCATCAGAAAATAGACATCATACCACCATAT
TCCCTCTTTCCACTTTATTCACATAACACTCAATATACATTTTGCCATAC
TCACTCCTATTCCTTTTACCCTTCCCGTGACTACACTTTATTCCCGAAAA
CTCTCTTCTTTCCCTATTTCTCATGAACATTCTTTCTTACTTCCCTTACT
TATCCTTCATCCTTTAAATGCTAGCTGTAATCCCACTAAATTATCTTGTG
ATACATAGTCTTCCACTGCCTTTGACACCTCCTCCGTAGCCAACCTCGAT
GTCGGACCACCTGGTCTCATCACCTTGGCTACCTTCATATAATATGACGC
TGTGTTTTTCCCAAACCATCCAACATGCGCCATTACCTCATCTTCCGCCG
CCCCCGCCATATGCAGAGAGATTGCACATCCAGCTCTAGTCCCGTGTAAT
CTTTCCCCTTCATACATCCCACACTTCTGTAGATATCTTTTAAAAGCTTC
ATCTATCGCTGAAGTGGTCGGCTGGGTATTCAGTATCTGCCCCTGTCTCG
ATGTGGCCCTAAACAACAGACCCCCATTCAAATCTATAGACAGATATTTT
GCCATTTCCACATAGTAATCAATAGCATCTACCGGGCAGGACGCCGGGTC
TCCTGTCTTCTCTAGCGCAAACACATTTCGCCTACCATCTCTTAATGTCT
TTCCCCATATGTGATTGAACAACAGGGCACCTGACTGAAGCCTATATATC
TCAGCCGTCTTCGTTCTCAACAAATCTGCTACTCTATCTCCTGCAAAGAA
AACCGCTTTGAATATTGCCTGATCTCTCGCCCTTACAAACAATCTAATAG
GGGATTTCTCCTTATTCACCTCCTCCATTATAAACCGACATACCTTAACG
ATCTTAGGCAAAAAAATCGGTTTCGCTTGCTGTGGCGTTAATCCTTGTTG
CAACTGTTCCCCCGTGACCGCCTTTATATACTCTTTCACTAACGGACTTG
CTGCGGGATTACCCAAACCCAATCGATCATCCCATTCACCACCTCGTCCG
TTCCTATTAAAAATCGCTCTCAATTTCCCTACATATGAATCAACTGTTTT
AAATGCCAATCTGTGCGGACATAAACATCCTCCCTCATCTCGATTACATT
CAGACATATGCACTGTTTTCTTTCCATCATCATCTTTCCAGATCAAAAAT
TGTATAACATCATCAGGACTTGCAGATTGTAAAGTCTTTGTCGGCTGTAA
TGCACCTAAGAACTCTCCCAACTGCTCCTCCAAAGCCCTTTTCTGCCTGG
CGTATGCTGAGGCCGATGCCATATCCATAATCTGATTATATCTTTCCTCT
ATTTTCTCCATGTTTACTGATCTCCCCCTAACTGTCGCTCGATCCCTTTG
TATTCTTGGGGTCCCACACTTCTGACAAAAATTGAAATCATAGTCATTAG
GGTAGCGACATATCTCACAATTTCTAGCCGGTACCCACAATCTAGGAGCT
CCAGTAAAGACTACAGGTGAAGCTGAAACGCCCACAGGTCCCAGTGTGAC
TGCCTTGTCCTCCAAATCCCCTTGCGAGTCGGGAACCGGATGACTGGTTG
CCCTGCGTTTACAACTTTGACTGCTTTTGTCGTCTTGCTCCATAATAGCG
GCCACCAATACTCCCTGGGGATGATATCAGGAACAACTACTGTAACCACT
GATCTCTGTACTTCCTTAAGTAAAAAATTTACTAACACTAGAATCATCAC
AAACGGCGGAAAAACATAGGCATTATATCCTTCTAAAGTCTGCGCAAATA
CATTGACCCCTTCTGCCCCCGGGACCGGGCATGGGCTGAAAAACTTAAGT
TTTTGCCCATTCCTCGCAGTTTGAACGTTTGACGGTAGTGCCATTAAATC
TATATCAAAACCCTGTTCACCCCCAAACTCCTCATCCAACCTCGCAAATA
CTTTCTCGTGGAGCTGAGTGTCCATCGGCGACAATCTTCTAGATGGCTTA
TCTGCTACATTATCCTTTGACGGCACATAACTTAACCTCAAATCAATATT
ACGCTGAACTACCGTTTCCCATAACCTGACCACTGCTCTCGTCAAAGGTA
GACTCTTGCCACCCTGGTTCTCCCACGCACAGATGAGGTTCCTATTATCT
ACCCACGCGTCCACTATCTTATTTCTTACTTGTTCTTCCATTGCTATGAG
GACTCTCTTCAACGCCTCGGTTTCCTTCACCGAGATATGCTCTGATAACT
CACTACCTTGCCAATAATCCTCTAACTGTAGCTCTCCTTCTTCCATACTT
ACCGAACCAGCCCATTTAAACCCTGATGCGTCCGTTGACAACTTAATCAC
CTCATGCTTTTCTTTCCTCCATGGCACATGGCCTTCCCAACTATCTAAGA
ATCTCCAGTACTTTAACTCTCTCTCTACCCCTCCTTGTATTGTAACGTAG
CCCCTTCCTCTCTGTGCTAACGCAATCGATGCAAACATCTCCCTACAATA
TAACTTAACCATTGGCACTGCTAAACTGAACGACACCAGTTTTCCCGTGA
TTTTTTGCATCTTCACCACCCTAACCTGCTTCTGGGCCAGCGTTTCCTCT
CTTAAGCGAGCAAAAGACGTTTTTTTCTTGCCTGGTAACGTGAACGCTAA
TAAGGTTGTATCCGCCGTCAACCCCAAAAAGTTCAGACATTGCACCGGCT
CCAACTGGGACTTATCCAAACCCAAAAAGAACCCCAGAGTCGTCAAGGTG
ATACACATAATGAAACACGCGGCTTGAGCTAACTCAAAATAGGACCAGTT
CCCCCCTTCTTGGCTATTACATATTCCATCTTCATCCTTTCTGTTCATCA
CTCTTAACTGGCCTGCATGTCTGTCATAAATATACAACGTCGATGGAACC
CCTAAACTTCTAATTCGATGCATCGGTAAGAGCCCTATCGTCTGATATAG
CATTGGACTACATCTCCAGCCATAGGGTAGGCTAGCTGTGGCATATAGCC
AGTTGCCCCACTGAAACCCGACCAGAGCCTTACTTCCCTCCGTTAATAAG
ATATGGTCATACCCACTCTTATCATCACATTTCGTATGATAATGGTTCTT
TCCTAGATATCTTGTTAATTGTAACACTGAATCCAACTGGAACGGACATT
CTTTCATCCAATTGTTCAGGTACCTCAGATCATGACATAATCTTGGCTTA
TTTGGTTCTACTGTTAAAGGCAGAATTAAGTACGGCGGTGGTACTACCCC
TACCTTACCCCAAATCGTCACCGCCCCTGACACCACTCTCGCTCTTATAG
TCTCAGCTACAAAATCCCCAAAACTGAAACAACTAGGATTATTCGGAAAA
TGTTTAGGTGGNCAACTGGGATTATTCGGAAAATGTTTAGGTGGTGGGAA
GGGACTATCCACATATCTTTGACCTTTAAAAGTGCCCGTGAATGGTCTTA
TAAACTCAGTCATATCAACCCCATGCTTTAACCAATTGAGAACTGTCTCA
TTCCCTTCCCATCCAAACATCTTCACCCATTCCTCCGCATTTCTATTCAA
ACCCCCTGCTACAAAAATGTTCGGATCTCTAAACATCATTGAATCTGCTG
ACGCCTTTATTCTTCCTGCTGCTACGTCTTCCACTGGCGGTGGCACCAAA
ATGTTCCCATCCCGATGTCTGGATATCCACTCCTCCCTTATTAGTAGATG
ATCAGTGTATGCTTGTAGTGGGTTGACCGGATGTAATGCTTCCTGCCACG
AAACTCCCGTTATCGAACTACTTAGTCCCTGTAAACGCAAAAAAAAAGAA
CCCTTCTTAAGACTGTTATGCCACTGCTAACCATTAATACACTCACATTC
CAAACCCCACTAATATCTTGACATCAATTCATAAAGGAGCTGTCGCGTTT
GCCAACTCATAACAATAGCAAAGACTTATTACCATACTACTAGTAAAGAC
ATTCAAATTTTCCATTTTATCTGTTATTTATTTTTTGTACTGGTTTTCAT
ACGAACATCCTTAAACCATGCAGAAAGGCTCGAATAACTGTAAGAACGTT
ACATATTCCCAGGAGGTTTCACTCAAATCAGATTCCTTGGATGATCAAGA
CAATACTATCTACAACTTTTCAGGCATTGAAATCAGCCTTGTTCAACTTT
TCAACTCAACCCTCAATGTCATGTTAAAATTCTCTAACTGTATCTTCCTT
TCCACCTTAACACGTCTTTCCCATATTAGCTTTTATAGTTATGTGTCTCA
AAATCTGACTTGTACTTTACGTGTCCCCTTGTAGCCACAGAAAATCTTAT
ATACTAGGCCTCTATGTACCTGTACACATAACTGCCCCTTGTCAGTAAGT
GTCTTAAACTAAAACACATGCCATTATTAGCATTACTTATTTCTGAGCTT
TCAGTATCTTTTCTGCCGCGTCAGCATACTTCAATTTTGTTACCTCTATT
GTTATTTCACACTTAAGTTAACAAAATAACTAGTAAAACCTTCTCAGCCA
AGCCCCATTAACGTGCACTGTACGGCTGCCAATAGCACACTAAGGCCTAT
AATTTACATTATCACGCCTTTATATAGTTTCTACTGTGGTTTTCCCCCTA
AACTTTGAACTCCATATCTGTACCATAGGGTAATACACTTTCTACCTTTG
TTATACTAGTTGTAACTGTACTTCTCTCCCCACTCATCATTTCATTACAA
ATTCCCTTGCCATCTAAACCTCGTTCACTTTTGGGATGCCACTCCCTTCT
TATTAGCGTGCCCGATTACGTCCATACCCGCTAAATATTCCTCACATCAA
ACATCTATACTTTATCATCTTACCCCTTTTGGCTAAAGCGACCCTTGGCC
TATTATCTTCCTATGTGTTCAACCAATCGATATAACACTGAATCGAGATA
CGCCACACTTTAATTCCATCAGTTGTGAACATTTGCATACAATCTTTTCC
ACATTTTCACCCATTCTCCACCGGGTGAAGCACCAAAGATAACTAAACAT
AGTCACAATTTCATATCCTCGACAACNTCGCTCTTATAGTCTCAGCTACA
AAATCCCCAAAACTGAAACAACTGGGATTATTCGGAAAATGTTTAGGTGG
TGGGAAGGGACTATCCACATATCTTTGACCTTTAAAAGTGCCCGTGAATG
GTCTTATAAACTCAGTCATATCAACCCCATGCTTTAACCAATTGAGAACT
GTCTCATTCCCTTCCCATCCAAACATCTTCACCCATTCCTCCGCATTTCT
ATTCAAACCCCCTGCTACAAAAATGTTCGGATCTCTAAACATCATTGAAT
CTGCTGACGCCTTTATTCTTCCTGCTGCTACGTCTTCCACTGGCGGTGGC
ACCAAAATGTTCCCATCCCGATGTCTGGATATCCACTCCTCCCTTATTAG
TAGATGATCAGTGTATGCTTGTAGTGGGTTGACCGGATGTAATGCTTCCT
GCCACGAAACTCCCGTTATCGAACTACTTAGTCCCTGTAAACGCAAAAAA
AAAGAACCCTTCTTAAGACTGTTATGCCACTGCTAACCATTAATACACTC
ACATTCCAAACCCCACTAATATCTTGACATCAATTCATAAAGGAGCTGTC
GCGTTTGCCAACTCATAACAATAGCAAAGACTTATTACCATACTACTAGT
AAAGACATTCAAATTTTCCATTTTATCTGTTATTTATTTTTTGTACTGGT
TTTCATACGAACATCCTCAAACCATGCAGAAAGGCTCGAATAACTGTAAG
AACGTTACATATTCCCAGGAGGTTTCACTCAAATCAGATTCCTTGGATGA
TCAAGACAATACTATCTACAACTTTTCAGGCATTGAAATCAGCCTTGTTC
AACTTTTCAACTCAACCCTCAATGTCATGTTAAAATTCTCTAACTGTATC
TTCCTTTCCACCTTAACACGTCTTTCCCATATTAGCTTTTATAGTTATGT
GTCTCAAAATCTGACTTGTACTTTACGTGTCCCCTTGTAGCCACAGAAAA
TCTTATATACTAGGCCTCTATGTACCTGTACACATAACTGCCCCTTGTCA
GTAAGTGTCTTAAACTAAAACACATGCCATTATTAGCATTACTTATTTCT
GAGCTTTCAGTATCTTTTCTGCCGCGTCAGCATACTTCAATTTTGTTACC
TCTATTGTTATTTCACACTTAAGTTAACAAAATAACTAGTAAAACCTTCT
CAGCCAAGCCCCATTAACGTGCACTGTACGGCTGCCAATAGCACACTAAG
GCCTATAATTTACATTATCACGCCTTTATATAGTTTCTACTGTGGTTTTC
CCCCTAAACTTTGAACTCCATATCTGTACCATAGGGTAATACACTTTCTA
CCTTTGTTATACTAGTTGTAACTGTACTTCTCTCCCCACTCATCATTTCA
TTACAAATTCCCTTGCCATCTAAACCTCGTTCACTTTTGGGATGCCACTC
CCTTCTTATTAGCGTGCCCGATTACGTCCATACCCGCTAAATATTCCTCA
CATCAAACATCTATACTTTATCATCTTACCCCTTTTGGCTAAAGCGACCC
TTGGCCTATTATCTTCCTATGTGTTCAACCAATCGATATAACACTGAATC
GAGATACGCCACACTTTAATTCCATCAGTTGTGAACATTTGCATACAATC
TTTTCCACATTTTCACCCATTCTCCACCGGGTGAAGCACCAAAGATAACT
AAACATAGTCACAATTTCATATCCTCGACAACAGTAGTAATTTTAAATTC
ACTTTCCTTCTGTGTTACCAAATGTACTCCTTAAACACGGAACAACAAAA
ACAAAAGAAGTCAACACAAGCATAATTAAAATCATACTACTTAGTCTTCT
GTATACAATGCGTATCTAAACCAAAACAAGTCATCAACCAAAAATAAACG
AAAATCATAATCCTCAAAACCTCAACCTTCACATCGGTAACACTCTGGAG
ACAGTCATCTTCTGCAAAGAACATTCTATTGTTCAATCTGCGCATCCAAA
TAATCCTCAATCTAAACAGATTTATCACTAGAACCTAATAAAACAGAAAT
CAATGCCAAGACTAACTAGATCCTGAGTTGGTAACACCATGAAATCACTT
TTCTCCTGGGATGTATCTCTAATCACGCCTTGGTCGTGATTCCTTACCAC
CTCAAAACTCAAAGAAAACTAAACAAAATATTTCTACAGTACCAAGAAAT
AAAATAAAAATAAAAATCACTAAATATAATCATCTCTCTTCTTTCCAGAC
GCGGCATCATAAGTTTAAACTCTCCAATCATTTCACAATCCCCGTCAAAC
TCAAAGAAAAATACAATAAATCGAAATGCAATAAACTCAACGAAAATAAG
AACTAAATGAAAATGCTAAACAATATTAACTATTCACACGTCAGATTGTC
CAGTCAAAATACTCTTATTCGAACTTCCTGTTTATCGAACATTCTTGTTT
CTTCTCTCCTAATTACACTGTTAATCAACACAATTCCTTTTCACATTACA
ATTCAAGAAACATTTTCAAACACTCACTTAACATCACTGCCCACATCATT
TTTTGAACATCTACTGGTACTTTTTCGGCTTAAAACAATCACGGGACCAG
TGTCCTGTTTTCCAGCAATTGTAACACACATCAGTTGATTTAGCTTTCCT
AGTGCTTCTACCTGTCCCTGGTTTATATGTCGTATACGGAGTCGTACGTT
GCTCCACATTCGGTGTCCTTGCAGCATATCTTCTTCCACTATCTGAAGTA
TTTTGTTGTAATTTGGCCGCCCCATGCTGCTTTGCACATGCCGCAATGTC
CTTAACTAACTGTTTCTCTAATGGCGAGCCTAATTGGTTAATAATCAAAT
CCTTAAAGTATGACTCCCCAGATAGGGGTGTAATCTGATCCACTATGATA
TTGAACTCCCTCGCTTTTTGATGATCCTCTCTCCTTGCTTGGGAAACCAA
AGTCTGCAGCAGACCCACCGCCCTCTGTGGATCAAAGGCCGCCCACGGCC
TCTTAGCATACTGGACCACTTCCTCTTGTAAGTCGTCGGCCGTTCTCCCT
CTTCTCATCCTTCCCAAGCTTTCCCGCATCTCTTGCATCTCCCGCCTCAA
TGCAAGCACATCCTAATACACAGCAACACAATACAAAACACATTACTATC
CTGAGGGAGTATACCTATCCCTATCACACCATGACACACGTCGTCACCAA
TATCACATAACATGCTTCTCATAACATAAAATTCGACTATGCCTCACCCA
CCTGGCCAAATACCACGTGGCATGCCTCTCATAACATACAATTCGTTTAG
CCGTAGCCGTTTACCACGTAGCATGCCTCTCCAACATAAAATTCATTTAT
CCCCAACCAAATACCACGTGGCATGCCTCTCAAACATAAGATTCATTTAC
TGTAAATCACTCTAATATAACGGCAGAAAATATAGCGTTGTGGGGAAAAT
GGAGTAGGTCCCATCATTTTGTCTTGACGGTTTTGAACACACATTACTGT
CTCAATATTAGTGATCAAATATTAACGATTATAAAATTTTAGCGGTGACT
ATTGATCGTTAATTAGCTAAAATTTAGTTACAGTTACCAAATCAAGACTT
ACAACCGTTTACTACGTGGCATGCCTCACCAAAACATCAAATTCATTTAG
CCGTGGCCTTACGCCACATGGCATTCTTCTGACATATGAAATTCATTTAG
CCTGTGGTCGTATACCACCCAACATGCCTCTCAAAACATCAAATTCGTTT
ACCCGTGGCCGTATACCACCTGGCATGCATCTTACAAAATCAAATTCGTT
TTAGCCATGGCCGCATACCACGTGGCATGCCTCAAAACATCAAATTCGTT
TAGCCATGGCCGTATACCACCTGACATGCCTCTCACAACATAAAATTCGT
TTCACCGTGGCCGTATACCACATAGCATGCTTCTCCCAACATCAAATTCG
TTTAACCCTAGGCCGTAAACCACACAACATGCGTCTCCAACATAAAAATT
CGTTTCACCGTGGCCGTATACCACACAACATGCGTTTAAAAACATCAAAT
TCTTTCCACCGTGGCCGTATACCACGTGGCATGCTTTTCAAACATCAAAT
TCGTTTCACCGTGGCCGTATACCACGTGGCATGCTTTTCAAACATCAAAT
TCGTTTCACCGTGGCCGTATACCACACAACATGCGTTTAAAAACATCAAA
TTCTTTTCACCGTGGCCGTATACCACATAGCATGCGTCTCAAAACATAAA
ATTCACTTCGCCGTGGCCATATACCACATGGCATGCCTCTCAATCACCCA
CTTTAACTATCATCATACCATTTTACAAAACCTGTCACCACCCTATCTTA
AATATCAACTGCCTCCACACACACTTCCCGAACGCCATCATATTATTTAC
ACAATCCCTAGCTATAACTCAATTATTTCCTCACATTCCTGATATCTTGC
ACGTGGCAACGATTTACTTCAATACTCATTCACGAGCCTCAAATTACCCT
ACCTACGTTATACTGTCACCATACTTACCCTCTTACACTCCCGCTTAGTC
CACTCATGTAACAATGACGGCACAATTTACTCTATGCACACACAAGAACA
CAATATGCCTCCAACCCCTCTATATCCAATACCTGTTTATACCCCAAAAC
ATAGAAAATCCCAATCGGAAAGCACTAATACCTGTTGAGGTAACTGTACT
CCGGCTTGCACTTGGGGACCGCCCGGTTGCGGTTGCCGGCTCGTCGACGC
CGATGGTTGCACGGCCTGTGCTCCCGACGGCCCTGCCTGAACAGCCGCCA
ACCCTTGCGCCACAGCTGGTGCCTGAGTCACTCCCGGTGCGGAATGCGAC
GCTGCTGGACCCGTGAAGATGTGGCTTGGGGCCGATTGAGACGTCCCTTG
TCCGGCCTGGCTTGCCACCCTCTGCTGTACCGACGTCTGCTGTTGCCCTG
CTGCGGCTGCAACCCCCGCCTGCTGGCTTGTGGCTCCCAAGCTTGGCTGG
GGTCTCGCCGTCGATACACTCGGTTGCTGAGTCGCCATACTACTCAAAAC
ACAACATGGTCCACATTACACATAGCGTCACCCTTTCGTCCCATTACCTA
ACGCTTCCACACCGGAGTCAGACTCAACCACCATGCCGGCAGAATAACCC
GAGTCATGATTGCAAGCCTTTCCCCCAGGTTGAAGGCATTACGACTTCAC
CACCACAAATATCCACTCAATTCTCACATTCACTACACACCAATACCATC
CCAAAATTGAAAATTGACAAACAAGACCACCCACTGAACATGGTCAAACC
TTCCACCTATTATGAATGCACGCCTGTTCTCGCTTCACTCGCTCCTCAGA
ATCCTTCGGTGAATCCGCCGACGTGTGCACTAGGGCTTGTCTGTCTCACT
GTACTTATCTGGTATTCACAGGTGGACTCATTAGTCTGATCCAATCAGTG
CACAGTGGGAATAGG
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113952-exon-Sc0000232-1564993656:18252..22008 | BlTCONS00113952-exon-Sc0000232-1564993656:18252..22008 | Branchiostoma lanceolatum | exon |
| BlTCONS00113952-exon-Sc0000232-1564993656:23748..27572 | BlTCONS00113952-exon-Sc0000232-1564993656:23748..27572 | Branchiostoma lanceolatum | exon |
| BlTCONS00113952-exon-Sc0000232-1564993656:27878..29116 | BlTCONS00113952-exon-Sc0000232-1564993656:27878..29116 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:18252..29116 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055859 |
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