|
|
Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000231:130396..139536- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113925 ID=BlTCONS00113925|Name=BlTCONS00113925|organism=Branchiostoma lanceolatum|type=transcript|length=9141bp|location=Sequence derived from alignment at Sc0000231:130396..139536- (Branchiostoma lanceolatum)
CGTCATCAGCTTGATGAAGATGCTCCTTTCAAGAGGAGAAGCTGTTACAG
GTAATGCTACTGTATGTTGCTGAGTACACAAGTATGGACGAAGTCTCGTA
CATGCATCTTTCTAGAAGTGTAGCCACGTTCTACAGTCTGACAAAACTCG
AAGTCCCCGAGCCGAGGAAGTTTGGTAGGGGCTTGAGGGCCTTGAGGCAA
GATTTCATTGGGAGCACCAAGCAGGTTTAACCTCCTTGGGAGCACTCAAT
CCGAAATTTTCGGACCGAGTGCGGAAGAGATGGCATTCGTTGGTCCAGAC
AAAGGTCTGGGTTTCAGATTAGTGCTACCACCTTGGTGCTACGTTGATCT
GTATACATAACACACTGAACACAGCGTCAACCGACGTGCACCAGGCGCAT
GGCAGTCCCAAGTTAGTGAGAATAGGGTTGGTAGAAAAAGCGGTCCGGTC
GGGACGGCGAAAAAGCGGTCCAGACTTTTCTGCATGTGGTTGCGCCATAT
GGCAGAAAGCGATAGAATTGATGAAATAGATACATCCAGGTGAAATAACA
TGGATTTTATGTACATGTAGATGGATTATGTTGTCCATTTTACTGCTGTG
CTGTCATTGTGGTGTCATTATATAGACAAGGCCAGCANACTTACCTTGAG
GCACCGCAAACTGAAGCGTAGATGGTTCCGGTAGTCCGCAATCTTCCTGC
TGGTGTTCTCCAGATCCCTCACTGAGCTTAGGCAAAACTTACCGTATTGA
TCCTTGATACGTTGATGAAGGTTAGACATCCAGGTAATAAGATACGCCAA
AAATAATTACTCAAGCAACTGGATAAGATTTTGAAACAGTCAGACGTTTC
AGACAGTATCCACTGTCTTTCGTCAGTGACTAACGATAGGACTGAGAACA
CCAGCTTTATACCAAAACTCTGAATAGATATGTTAATGAGGTAAAGACAA
TTTAGGATGTCTTGAAGTAGTCTTCAAAAAGAAGATTAATTCAAGACAAA
GTTATGCCAATAGTTCAATTAGCTACTGTTGTTCTAGTACAGTAACTAAA
TGTTGCTTGTCGGGGGTGGGGGGTGGGGGGCGGACAAGCAACATTTAGTT
ACTGTACTAGAACAACAGTAGCTAATTGAACTATTGGCATAACTTTGTCT
TGAATTAATCTTCTTTTTGAAGACTACTTCAAGACATCCTAAATTGTCTT
TACCTCATTAACATATCTATTCAGAGTTTTGGTATAAAGCTGGTGTTCTC
AGTCCTATCGTTAGTCACTGACGAAAGACAGTGGATACTGTCTGAAACGT
CTGACTGTTTCAAAATCTTATCCAGTTGCTTGAGTAAGGCCAGCAATGCT
TCATGTATTTCATTAGGTTTCCTCAAGGAGGTTATATAGCTCCTTGGTTT
CCTATAAATCATCTCATCATACTACCCACCTTTTGTAAAACCTAACTTGC
AATGCAAAAATATAGTAGTAGTCCACTGTTTTCTGCTGCTGCAAAAATGC
AAAAATATACAACTTCAAAAACTTGACTGGCATCAGCCACTTTCATATTG
GTTGAACTGGTCATTTTGATTGACAGATAAGTCAGTCAATAATGCTTGAT
AAAGTCTTATCTGAAGGTAACCTCTATTGTTCCTTCACAGTGATGTTTCC
AAACTGCTTGGTGACATCTCCGGAAGACTTTGGACTGCTGCACCCCTCCC
ACTAAGATGACATGTTTCATTCTCATGTGGACTGGCTTTCTCCTTCCTTA
TGCCAGGGTCATATTTCCAAACCTGGGCCTTACTTACTGGGCTGTTTGCA
GGAACAGAAAAACAAAAGTGTAACATTATATCCAGAAACATACGCAACTT
ATTCTAATGTCTAATTTTTAAAACATTCTGTTGTGTTTTGTTACCTTTAA
TATCATACTTTCATTTTCATTCCATCTATGTTGATGTAAGTAATAAATTG
TTTGATGAAATCAGAATGGATTAGCAGTTTTTGCAGTCATTTTCTGATGT
ATGAATTAAGAAAGAAGGACAGTCTTTAGCATGATTAAACAATGACTCAG
CAGTCACATCTTACATTATAACAGACATCACTCCGAACCATATTTTTTTA
AAAATATTTTGATGAAATCTGATTAAATTTCAATGTAGAGAAAAAAATTA
CACAATGGATAACCCTCTTGAGGCCAGAATAAGCAGTTGATGCCTGTGGA
AAATTGGACAATAAAGCTTTTTGAATTTCATATTTTTTTAGATCTAAAGT
GGAGGTGACCACTATGAATTCAGACCCTCAGAACCAGTGATTTTGCAAGT
TGTTTTTCTCTATCATGGAACAGGTAGCTGAACCAGTCATCATTACTAAT
AGGCATCAATCAGTCAGATATTTCACTGGGTTTCTCACTGGGCCGTGCCT
ATTTGCGACAAAAGATTGTGACAACTCTGCAAATGTTCACCAAATTTTCC
ACTGTGGTTACACAGTGTTAACTGAATTGAAAACCAATTTACAGTGATTT
AAATGCATCCAAAAGTGATTTGCACTGGTAAAAATTATGTGCTTCGTACC
ATGCATGTATATGTTGATAGATTTATTATTACTTTGATGATGCAATCTCT
ATCTTGTACTAAGTTGTAGCTATATTTTGTTCAGCATCTTCCCTCATGAC
CACAATCAAAAGTGTACGGATTTGAGCTTTAAATGAATAAACAAAAGTGC
AGGCAAACAAAAATTAAAAATGACATGATAATAACGGGGGGTGTCCATAG
TCCGGTAAGGTCCATAGTCCGGTAAGGTTTTAAAAATCATTGTTGCGGAG
ATATGCATGGGTAGCTGCATATGATAAGTACACCTAGTTATGGACTAAAC
CTTCATGTAAATCACCACGAAGTTGGAGTATGTGTTGAAGTTGGTAAGCC
CCAACGGATAAAGATTTCAAAAATTGCACAAGTTTGATGCCTTCGGTGCG
GGTTGACGAGCGAACGCACCGAGAACATGCCCTTCGAAACTCTTTAATTG
TTCATCGTAGAAGACAACATGTAAAAAGATACCACCACATATAGGAAGGA
CATTCATTATATTTCCTCTAAAAACAAACCTATATACCATCTTTGCCTTT
AAAGTTGGATAATCGGAGTTAAAATGACGCCGCAGTGTTCATCCTGTCGC
TCCACCATCTTTACCAATCACGTACGTATGACGGCAGCCTAAAGAGGTGC
CCAACACAATTAAATTAGTCAACCCGCCGGTAGAGCGCCGACCATTCAAG
AAAATTTAACCCTACCGACTAAAAAAATCCCATAGATATTGCTGCTGCCA
ATAACAAGGTTGAAAAGACCATCAAGGAAGCCGAAAGCGTAAAGGCATAC
GATCGCAGGAAACGTAAATAATGTCCCGCCATTTTGTTTGCCGGCGGCAG
GTTATTCTCGCCGTGAGAGGGGAAATTTCTATCTCACCGTATTTGAACAA
TTACTGTAATACAAAATATGGCACATGTTTGGGACAAAAAAATGATATTG
CAAGGCTTTAGTGTAATTATATTCACATGGGATGCTTAAACATGAACAGT
AATGACCTGCTTGTTACCTTACCGGAGTTTGGACCCCTCTTTTGTGTTAG
AACGTTCCACTAGAATGCAAACCCCGAAACTGCCGTGACTTTTGTGCGTA
ATAAAACAAAGTGCGGAACGCTACTGTTTAAATGAAAACTATGTATGTGT
AGCTTTAATCACAGTTATATGCCTGTTACAAGATCTAAGCTTGTTTTTGG
TGGGTTCAGGGCAAAATGTACGATGATAAAAGACAAGCGCATTCACTTAG
AACAGTTACCGAACTATGGACACCCCCCGTTAGTATTACATTTTACAGAC
AAGACTGTGCTTTTGGGAACATTGTGCCTTTTGGCACCAGTAGGCGTCAA
TTGATGTGTCAGTTTGCCAATTCCCAAAAGTCGGCAATTTCGGGCAACAT
TGAAATTCAGACATAGATACTTAAAGGCAGAGACAGATTTTGACAAGCCT
AGGCTTAGACCCCGTTCACACTCATTTTTTTCAATCGCGATTGAAGTATA
ATCGCGATTGTTCGATCCGATCGCGATTGAACGCAAAGAAACTTTTGCGT
TCACACTGCTTTTCGCCAAGTGGATTAAACCACGCCGTGATCCGATCGCG
ATTGAAGCATGATTGAAGCATGCTGTCGGCGATCATCTGGTAAATGTTGT
TGTTGTTGTTGTCCTTGTTTTGTGTCTATTTTTCCGCTAGACATTGTCAC
TTGGTGCGGTAAATGTCCCTCTTTCGGTGACATTTCCCCAGTTTGGCCTG
CACCTCCTCTCTCCCCCAGATTGCGATGAGGAGACCCTGGTCTCCTCATC
GCGCCATCTGCCACCAGCTGAAGTTGCTGACGGAGTTTTTTTATTCTTCT
TCTTGGGCATTGTTGACGATGAAAAGTTGTTGTTGTTGTAAAAGAGCGAT
CTGACGTGCGGATTGGGTTTGTTTTCCCGCGCGATGCAAACTATGACCCC
ACGTACCCGCATGTATGACCTCCCACCCCCGGAACCAACCGAAATCTCCG
CCGATCGCGATGGAATGAATCGTAGTTGTGTTCACACTCAAAATTTGATA
GGATTGGATTGGATCCGATCGCGATTAATCCAATCAAACTACCTCCGGAG
GTAGTTACAATCCAATCGCGATTGGATCGTTTTGGATCGTTCCAATCGCG
ATTGGGAGCGTTCACACTGAAAAAATCAATCGCGATCGGATCGATTCAAT
CGCGATTATACTTCAATCGCGATTGAAAAAAATGAGTGTGAACGGGGTCT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAA
CAGGTGCTAACTGGAGCCAATTTGTCAAATTGGCTCCAGTTAGCACCTGT
TTGCAAATGTCTTTTGCAAACAGGCACGGTCCAGTGAGGTACCCGCTTAA
GCCTAGGCTTGTCAAAATCTGTCTCTGCCTTTAAGTATCTATTCTCAGAC
CATACACTTTTTCAGACTTCCATATTCCCATCCTTGACATCCTTTCCATA
TGTTACGAAGGAACAGAAAGACAAGATACTAGAAAGACAAGATACTTCAA
TGGTTATGATCTTTAGTACTTTTCTACATTTTTATGTGATACCATTATGC
TTCTGTTTTTTTATGTTACTTGTTAAGACCTCTTTCAACACCACTCTTTG
CATTTTAGAATGTTTGCTTTAGTTTTTCATTCAGTGACAACTCTGATTAA
CCAGAAGGGACCACCTTCATTATCTGGTCTCCAGGTAGAAGTATGGTTTC
TACCTGTTTTGAGTGTCTTTTTGATTGTTACTTAATCCAATGGAAACTAT
GGACTCCTGCACCTCTCCCCTAATCAAGATGCGGACTAGCTTTTCGTACC
TAGATGGTTTTCTTAAATCAGAAGGGATTTTCAGTCATGTTCTGTAATAT
CCAACTTACAATAGATTTTCAGTCATATGTTCCGTAATATCCAATGTACA
ATGGGCTTTCAGTCATGTTCTGTAATGTACAATGTAGAATGGAAGACAAC
AGACCTAGGGCTCAAAGTACTTGCAAGAGATCATGTACTACTAGTAAGTC
AATAACATTTAAGATTACCGGTACCTAGCAGCGAATCAAATTTCGCAGGC
AGTTCTCATTTTCTTTTAGTTTTATTCCATCACAATCTTTGAAAATGTTA
CTGATAGTATCTTGTAATCTGCTGTATGTTGATAATAACAAATTGTTTCT
GTGATGAACTCAAGACAAAGGTAGGCCACAAAGTTTACAAGTTGCGCAAA
TTTTCAATCTTAAAAAGTTTGTAAACGTAACACCCTTAATAGGCCATATT
GGCTTGATTTTATGTATCAAAAATAATAAATGCCTCCTATTTCTAAACTC
CAATTATTGTTAAAAGTCTTTGGCTGTTGTTCTGAGGAGGCATAAAATCC
TATCAAAATTCGGTACACATGTGATATGGATTCTGAATGGAGTTTAAACT
GTAAACGCCAACACAAAAATTGGACTTACCCAAATTTTCGACTGATCAGC
TCCAGTCTTTGTCAAGGAGTGAGCAATCCACTGATTGTGACGTCACGTTA
TGCAGATGAGACACGTGACTCGGAGAGCAGTGGATCTTAGGTTGCAGAAA
GTCTATGGCGCCCTCCGTCTCTGTTGAGGGATGGTTGTAATGCACGGATG
TAGATCCCTCTTGCAAAAAATTCTGATTCTTTGTCCAGGATCTTAACCTT
GTCCAATGAAACCGAATGTCCAGGCGACTCTAAGTGTATGTGTTTAGAAA
TTTCAGAAGAGGTTATGCTCGGATGCTTGTGTTCGTTGAAACGGGTTTTC
AGTGAGCGTTCGGTCTCTCCAATGTACATCTCTAATGTTTTGACCTTGAC
AAGGAATGAAGTACACAACTCCGCACTTGTCCTCCCTAGGTGTTTTATCC
TTAGGCGCTACTAGGGCATTTCGAAGTGTTTTAGTTGGCTTAAAACAGGT
CTTTATCCCATGTGATGTGAAAATGCGTCTAAGTCCTTCAGACACCCCTT
TCGTGTATGGCAAAGTGACGAAACCCCTGTTGGTTCCCTTGTTGTTCCAG
GTCTTGTTAGTTTTGCTGAGCCGTTGGGGTTTGAGCGCAGTGGCTTTCTC
AACGCCCATGTGGGATAACCACACATTCTCAAGGCACTTGTAATGTGAAG
TTTCTCGTCTTCTTTGTCCTGTGGATCTGTGATAAGGGTTTCCGCCCTAT
GAAAAAGGGTACGGACAACCCCGAGTTTATGATCCAAGGGGTGGTTTGAA
TGGAAGTTCAAGTACTGGTCCATGTGCGTGGGTTTGCGGTAAATCTTGAC
TCGTAGTGACCCGTCTTCTTGTATTGTTGTTAAAGTGTCTAGGAAAGCTA
AAGATCTATTCTCTTCCTTCTCAAACGTAAATTTGATGTCAGGATCTTAG
TTGTTGAGGTGTTCTGTGAAATCATTGGCGTACGCCTTCTTCAGTTTGGT
AAAGGTATCATCGACATATCTGAACCACCACACAGGGGGGTGGGGGGCAG
ATTTGATGGCAAGTTGTTCTAAGTACAGATTTACACAATGGGGGAAACTG
GTGACCCCATTGCGGCCCCATGGATCTGCTGAAAGAATATACCATCAAAC
ACAAAGTAAGTACAGTTCAGGCAGATTTTGAGTAAGTCAACCAACTGTTC
TGGGCTCAAAGTAGAGCGTTGGGGTAAAGACTTATCTTCCTTCAATATCT
GTAGAATTACATCTGCTGCCTTATCAACTGGAACTGAAGTGAAAAGTGCT
GTCACATCATAAGAACGGAGTACCTCATCTTCTTCTACATGTTCATGTTT
AATCAGTTCTACAAACTGCTGTGAGTTCTTAATGTGATGTCGAGTATTAC
CCACTAATGGGGCAAGAGTATCTGCCAGATAGTCAGCACAAAGAAATGGA
GTCTATACTACTAACAATGGGTCTCAGTGGAATGCCAGTTTTATGGACTT
TAGGGAGACCATAAAACTTCGGAGGCACTTGTGTGGTTGGGTATAACCGT
TTATAAGCAATATTGTTTAACCCACCTTCAGTCTGAAACCGCTGGAGTAC
AGTATCTTGTTGTTAGGTACCTTTTTCCAAGTCTACGGTACGTGTTCTTA
TCATCAAGTAAGTCCAAACACTTTCGTTTGTAGTCTTCCTTGTTGAGAAT
AACCGTCAGCCGCCCCTTGTCCATTGGTAAAATAGACTTTCTGCAACCTA
TGATCCACTGCTCTCCGAGTCACGTGTCTCATCTGCATAACGTGACGTCA
CAGAAGCAGTGGATTGCTCACTCCTTGACAAAGACTGGAGTTGATCCGTC
GAAAATTTGGGTAAGTCCAATTTTTGTGTTGGCGTTTACAGTTTAAACTC
CATTCAGAATGACTTCTACCAACACAGATGAACTTTCAAGTGAAGATGTG
ACATGGATGTCATATGTAAAATCAACTTGAAGTCTGTATGATCTTACACA
ATTCTAAAAAGTACCAATTTCGTGCTGAGGTATTGGCAACTGTGCAAATA
CACAGTAGTCCTCTTTGCAGCATCAAAGTCCTCACAGTATCATATCTCAT
CTGATAACTTACAGTACAATAGTGCTCTCTTTGCAGCATCGTATCTCACC
TGGAAATTCACAGTACAATAGTCATTGCAGCATCATATATAAATATATAG
CATACCTATATAATATAGGCCAATTTATATTCCACTCTATGTAAAAACGA
GACAATATTAATTATACATTCCTGATGCAGCATACTGTTATCAACATACT
GTTCACGAGCATTAGCATGCATATCATGATTGTAGTAGATTGTCTCTACT
GTTATTCATGAATTAGATAATTATTTATACTAGTTCTTTAGAATTGTTAG
ATATAAGCATGAATTCAATTACAATGTATGTTGTCATACAATGTACCAGT
TACAACTGCCATGCACTAAAGTTTCACCTGGTAATTTAAAGAACAGATAG
ATTGTAGTAACTGTTATAGTCCTCTCCTTGCACCATTATAATCTACAGTG
CAGTTCCTTTCAACTTGTTACACAACACTGCAAATCTTTCATGGTGGTTC
TATGTTTACATTTTTTGCAGGGACCTCTCAACTGTGGAGTCGTGACATGT
CAGGAACAAGATAGATTTGCTGTCAGTCATGCACTCTGTGTGCCCAGGAC
ATACTTTAACCATCGTAAAGACCCCTACATCAAATGTTCAAAATATTACA
AAATGTTCAAAATACTGGTTCAAAGCAGCTGGGGTAGATCATGCCTGATG
GCGACTACGGGTTCCCCAAATGCAAGCAGCTGGCACCAGTGTCCACTCCA
TCAGGAACTTCTGAACGGGTGTAGCTGTACAAGGAACAAATGAAGCATAT
ATAGTTTGACATCACTGGTAAGCAACATTGTGCAAACCTTGTACCGTATT
GACTTGGGATTTGGGACGTTACAACTGATCAGATACTGATATATAATTTT
CCGCAAGCCTGTTACCTCCACATTGTGGAAACCATGTTCATTGGTCCATA
TGCTTTTGAAAACACGTTCTAATTTTTCACTTTTGGGGCATTATACTTAA
GGAATCTACATGGTGTCAAGCACTGTCTACTCCAATGTTTT
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113925-exon-Sc0000231-1564993656:139487..139536 | BlTCONS00113925-exon-Sc0000231-1564993656:139487..139536 | Branchiostoma lanceolatum | exon |
| BlTCONS00113925-exon-Sc0000231-1564993656:130396..130916 | BlTCONS00113925-exon-Sc0000231-1564993656:130396..130916 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000231 | genome | Sc0000231:130396..139536 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055840 |
|
