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Sequence
The following sequences are available for this feature:
transcript from alignment at Sc0000228:148358..153098+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113301 ID=BlTCONS00113301|Name=BlTCONS00113301|organism=Branchiostoma lanceolatum|type=transcript|length=4741bp|location=Sequence derived from alignment at Sc0000228:148358..153098+ (Branchiostoma lanceolatum)
TGTGCGTTGCGGGTACGTCACAACAAATCGTTATTGAACTAAGGCCATAT
TGCGCCAAAAGTAGTTACTCCTTTTGGCGTATCTAAATACATGGATGTCT
AACCTCCATCGACGTATTTCAATATTGCCTTAAAAGGCCATGTTGATTTG
ATTATATGGACGACATCCTCTGGGAACGCCAAAACTGATGCGAGCGTGCG
AATGAAAAAAAGCTTCGGCCCAAATAAAAAGTTGCCTTTATCATGAAAAA
CTACGTGGTCAGAAAGGTTGAGCAAGTGACTAGAAACACAGAGCATGGTA
TAGCGCATAAAAGATTCTTCATTTACATTTCTTCACCACATCTTCTTCTT
GGAATTAATTTTGTCATATGCATTCTACGACATTACTACCGTTTTCCTTT
TTTTTTGCAATTGACGGCATATATTTGATAATTTCCAGCATTTTACAGTA
TTGTCGAAAACTTGCTTTTTTGTGGAAACGGACAAAAATTTATGCACGCG
CGGATGTCATCCATATACTGAAATAATCCAGTCAACATGGCCCAACAGTT
GATTATCACAGAGACGAAAGAAAAGTTGATGGAGTAGATCGACAAATAAT
GTAGCCTGGTCCCAGTCTGCACGGGTCGGCTTGGGTGTGTTTTACGGGCC
AAGTCTGCTAAATTGACCCGTTTCTGTCAGTCTGTCTAAGCTGCCATATA
GAGTTTAGCAGCCGTCGTAGTTCTGCCGCCACTGTAGAGACCAGGAAGGA
CCTAACTACCCCTCGGGCGGGCTAATCTGTCTGGGCTGGTGGGCATTACT
CCCAGCCCCGCAGAGAAACCGGGGAGCTTCCGACGGTATGGTTGCCAGGT
TACAAATAGTGAGAAAGTCTGGGACAAAAGTTTAAACGTTCTGATGTGCT
CCTTCCAAGATGACGCCGTCCATGTCGCTACCGCACATCTTGGTCCAAGT
CAGATGGTCTGCGACATTTTCAAGTTCAAGTGGCCGGTGGGTGAGGGTAC
TGCAGCTGCTGTGGCTACTGTGGCGAGGAAAGGTATGGCATGTCGTGAAT
TCAGTTAACAGTTTTCTGGAAATATCTTTATTGTGATGATCATGGAAACA
AACGTTAACCATTGACCTTACACTGTTTTAAAAGACCTTGACCTTGTTGA
CACATTATAGTTACTAATGTTAATGATAAGGATTTGCAGCGTTATTATGG
CCGTAAGGAATGTGTAAAATAACACTGTTATTGCAAAATTTCATACGAAA
TTCCAGATGATTCTGTCACAGTGGAGTGTATTTCCAGGTTGTACACCGGT
GAGGATGTCCATACTGGACGGTAGCCCAACCAGCGGAGGTATCTTCTTTG
ACGCCCGGGTTTACAACATGAAGGAAGGGATACACAACACCAGTCTACTG
TCTCCCCCTGAGTACTGCGCCCACAGCAACAATGTAATGTCATAATGCCA
CAATCACTTTAGACGGTCATGGAAAATAATCTATGTGGTAGTGGGCAGGT
GAAAGTTCTCTTGAGTTCATACCACTGACTTTTATTTTTGAAGAATTGAT
CGTGAGATTGTGCTTTGCTATCCTTGTTACGTTGAATGCCAGTCTTTGTG
ATTAGAAAATTGCAATTGTTTACATCTAGCCACACTACACAGGCGTATCA
CATCTGATCCATCTTATAAATCAAAGGTGTTCAACTTCTTATCAAATTAT
ACCGTTTTATGACAGCAGTGATGTGGTCGTCTACGAAAACGCTTATCATA
TATATTTCCTGTCTTACAGACTACAGCACACAAGCCACCTCCCTCCTTGG
TGAAGCTTTTCTCAAGTCTGTGAGAGACCATCGACGTCTAGCACGATCAG
TCACGGTGAACAGGAATCTTGGTGTTCTAGGAATGACAATCAGGCAAAGA
CATAACACAGTGTTTTAATAAAGATCAGACCGGAATCCTTTGTACCCATG
TCATGTTTCCATTCTTGTTCTTTTCTGGTCTTAATTGTTGTTTCTCAAAT
TAATGCTCGTTTCATGTGGATTCACGAGGACTTGAATGTTTTCAGATATG
ACATCACCTTGATAAATTGTTGTCAGTCTGTTTTTCTTGAGAATTCTCAA
TTTGAAAGCTAAGACGTCTTTGTAGGTAAGCGAGTGGTGCCTATCATTCT
ACAGACAGCCATAATGCTCACACTTTGTGATGAGTAACAGAATAATGTAT
CCATTCCATTTAGGTAACGTCTACTAATATAATCCCGACACGTCAGATAA
AAACTGTATATCCCCTTCCTTGGAAAAGTATACCCTGAGTACCAGCCTCC
GTAGTGACCGCTGGCTCAAAACATTTGGTTAGCAAGCGAAATTTTTTGAG
CCAGCGGTCACTACGGAGGCTGGTACTCAGGCTAGGAAAAGTACGCCGAA
AGAGATGCAATCGCCCCATTATAACAATGCACTCCTGCATAAGAGACCGT
GTTTACGTACCCACACTACCCGATGACTTATAACCTTTGTACGGTCAACG
AACCAGCTCAATAGGTTTAATCAGGATATTATATTTATTTTACCGTCGGT
GGTTCCAAACGTCGGTAATAGACCTAACCGCTGTGGTAGAGCAGATATGG
CGATTCTATCGGTTCTACTTGTGTTCGTGCTTCACATCACGGTGGGACTT
GTGGAGGCACAACAGCCATGCTGCACACCGCTACAGTGGCAGGCAACACT
GGGGGTCACATATGGAATGGTACATAAAACCTTACGATCAATACGTGAGT
GGGCAGCACACTGGGAACAATATGTACTTTTCCTTCCATTAACTATTTTT
TTTGCAAGCATGCTCCACCAATGGTTTACATTCCGGATGTATAACCCTAG
AGCTAACCTAACTGATAATAGGGTATATAGTTTGCTATAACGAAACGGCT
TTGGGATGCAGCTCGATATGTTTCCTTATTTTTCATTCTCTTGTTAGACG
CTTNCATGTAACTGATAATAGGGTATATAGTTTGCTATAACGAAACGGCT
TTGGGATGCAGCTCGATATGTTTCCTTATTTTTCATTCTCTTGTTAGACG
CTTTGTGCACGGCTTTGATTTGATTAGTAGAAGTTAGAACACATTGAGTT
AATCAAGACCCTTCTGAAATTCCCGGTACTAATAATATCTGTCTAGTAAA
CAATACGCCTCTTTTTAGATCTTTAACGTTTTGTTTCCGTACTTTTGGAC
CTTGGGTTGTCCTCAAAGAGCAAACAAAACACTGGCTATAGTCACTGACG
TTTTCCATGGCTGATGTGTGCCCAGGGCTGGATTGACAGTAATACTGCCC
AAGCTGTTAGGAACCTAACTGCAGAGTTTGCCTTCGACTGGAATAAACGC
ACGGCAGCGATGTGGATGACGGGAACTCAGTACAGCCCTCTCGTTCCCAA
ACCACAACCAGTCCACAATGCCTACATCTGGGACCACGCAACGGTCAGTG
CATATGTTGATAAGTACAATCAAACCTGTACTAGGGACCACCTCTGTGGT
AAAGCTCAGTCAAACCTGCACTAGGGACCGCCTCTGTAATGCAGTCAAAT
CTGTACTAGTGACCATCTCTGCACAAGGACACTGTGGCTAGTTTTGCTGA
TTACTTTTTTCTCATTAATCTAAGTACCAAGAGCCCCATTTATAATGGCT
ACTGCGATCATTTTCTCCAAGTACCATGGATGGTCGCTTTTTTGAGACAG
GTTTGACTGTATGATGTAAGAGTTTAATAGGTACATGAAGAAAATACTAC
CGGAAAAACAGTCTTCGTGAGGTGCGTTTCCTTTGCCAGCAGGGGAAAAA
TGACATTCACATTTAACTTGGGTCAACATTTTATCGGCTTGTTCCCAGGG
AGTAATGTGGACCATCGACCTGACCAGTCAAAGCTGCCAGCACAGCGAGC
TGAGTAAAGGTCCTGTGTCCAAGCTGTGCGTTGCAGGTATGTCACAACAA
ATCGTCATCATGCTAACAGATTATTATCACAGATACGAAAGAAAAGTTGA
TGGAGCAAACCTGCTCTACAAATAGAGGTTGTTGGGAAAAATTGTGACCT
TTTTGTGATATGCCCCGTTTTTGCTCACCCTCGTCGTTGGGCGGAAAAAG
GGGCATATACATGTAGTAAGGTCACCATTTCCCCCATCCTCTGCTTGGAG
AGTAGAATAGATTTTCAAAAAGTGAGAAAGACTGGGACAAAAGTGTAAAC
GTTCTAATGTACTCCTTCCACAGATGACGCCGTCCATGTCGNACAAAAGT
TTAAACGTTCTAATGTACTCCTTCCACAGATGACGCCGTCCATGTCGCCA
CCGCACAACTGGGTCCAAGTCAGATGGTCTGCGATATTTTCAAGTTCAAG
TGGCCGGTAGGGGAGGGTACCCCTGCAGCTGCCGCGGCTACTGTGGCGAG
GAATGGTACGGCTAAGTCGTAAATTTATGCAGTTTTCGCGAGATATGTTT
ATTTTGATGATTATGGAAGCAAACAAGTGACCTTAAACTGTTTTGAAAGA
AAATCTGCTTTCAGTGACCTGGACATATTATTGCAAGATCTCAAACGAAC
TTTTAGATGATTATATCACTGTACGCACTATTTCCAGGCTGCACGCCGGT
AAGGATGTCTATAGTGGACGGTAGCCCAACCAGCGGCGGTTTCTTCTTTG
ACGCCCGGGTTTACAACATGAAAGAAGGCATACACAACACCAGTCTACTG
TCTCCCCCTGAGTACTGCACACTTGACAACAATAAGGTATG
Gene-mRNA-Prot
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00113301-exon-Sc0000228-1564993656:148358..148369 | BlTCONS00113301-exon-Sc0000228-1564993656:148358..148369 | Branchiostoma lanceolatum | exon |
| BlTCONS00113301-exon-Sc0000228-1564993656:149267..149293 | BlTCONS00113301-exon-Sc0000228-1564993656:149267..149293 | Branchiostoma lanceolatum | exon |
| BlTCONS00113301-exon-Sc0000228-1564993656:152664..152762 | BlTCONS00113301-exon-Sc0000228-1564993656:152664..152762 | Branchiostoma lanceolatum | exon |
| BlTCONS00113301-exon-Sc0000228-1564993656:152945..153098 | BlTCONS00113301-exon-Sc0000228-1564993656:152945..153098 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:148358..153098 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF055611 |
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