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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97456_cuf0 >transcript:BL97456_cuf0-protein ID=transcript:BL97456_cuf0-protein|Name=transcript:BL97456_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=369bp
MKTWKISRKGLFRKENLKSASHITGQMAKMQTEMERFRNYFHGINPLLTN
MKGIPYQIAELEARQDECCSTLGDTVEELASSGNGSAVRQLEMQKTQQQE
LSLLAAGHSEIRTSLEALSAALQRLERDQDDMRQLSTTVDALKRDQDDMR
QLSTTVDALKRDQDDMRQLSTTVDALKRDQDDMRQLSTTVDALKRDQHDM
RQLSTTVDAMKRDLDKERNRTAASDEMRKTSVTCPDGYTMFREICYKAFI
TWTTFIEATTGCSADGGTLAMPRDAETDAFLISLYKSASDHEPFLYHTYF
WFGLHDRRREGSFAWVDGSALGTYSNWGPAQPNDYWGNQDCVVYSAKYPK
DKWVDMGCDELYHSICQAV Run BLAST on NCBI mRNA from alignment at Sc0000010:5869001..5870796+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97456_cuf0 ID=transcript:BL97456_cuf0|Name=transcript:BL97456_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1796bp|location=Sequence derived from alignment at Sc0000010:5869001..5870796+ (Branchiostoma lanceolatum)
TCGCACAGCAGGGGGTATAAGTTACATAACAACAAAAACGTAGAATATGT
CACGTCAGAGGAACTGATTTCTCCGAATGAAAACATGGAAGATATCAAGA
AAGGGTCTATTTAGAAAAGAAAATTTAAAAAGTGCATCTCACATTACAGG
TCAGATGGCAAAGATGCAAACGGAGATGGAGAGATTCAGGAATTACTTTC
ACGGCATCAATCCGCTACTGACGAATATGAAGGTCAATATCAATATTTCT
GTCTCAATCTGTATCACCAGCCTTTAGTAAAACGCACCACCTTGTCCAGG
TGATGAAGGCCCAGTTGCTTGAGTAATTATTTTTGGCGTATCTTACTACC
TGGATGTCTAACTTTCATCAACGTACACTTTTATAACTTGATGTTTTGTG
TGAGTGTAGGGTATTCCATATCAGATCGCAGAACTGGAGGCGAGACAGGA
CGAGTGCTGCTCGACTCTGGGTGACACCGTGGAAGAGCTGGCGTCCAGCG
GTAACGGTTCGGCCGTTCGACAACTGGAGATGCAGAAAACTCAGCAGCAG
GAGTTGAGCTTGTTGGCGGCTGGTCATAGCGAGATCCGAACGTCTTTGGA
GGCGCTGTCTGCGGCCCTGCAACGGTTGGAGCGCGACCAAGACGACATGC
GCCAACTGTCCACCACTGTTGACGCCTTGAAGCGCGACCAAGACGACATG
CGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAAGACGACAT
GCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAAGACGACA
TGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAACACGAC
ATGCGCCAACTGTCCACCACTGTTGACGCAATGAAGAGAGACCTGGACAA
GGAGCGAAACCGAACCGCCGCCTCGGATGAGATGAGGAAGACGTCAGGTA
AGTTAGTTTTTAGTTGTTATATGTAATGTTTATGATGGTATTTTGGCCCA
TACCATCAGTCTAAAACAGTAAAAAAACTGTGTCACTGACTGACAATCAT
TTTTCCATTACATGATATCATTTATCTTACCAACACTTCCAGGCTACGGG
ATGATATACATTATTTTAAAAAAAGTACATATTTTGGCATTGATTATGAT
ATCATGGCCCTCATTAATGATAATGTGCTTAAAACAAGTACATATTGTTA
TACTGTCTTTTTTTAGTATTTGTTTTGCTAGTATCAAAGAAAACTACACG
ACATGATGGGGGGATATGTTATTCTGACAAAGTTAATATAATTATTCATT
AGTGATGGAATTCTGGGACATTTCCAACATCACCAATGTCTATTCCTACG
TTGTTGTTGCTGAGCCAAACATATTTTTCAGTAACTTGTCCCGATGGTTA
CACAATGTTCCGTGAAATCTGCTACAAGGCCTTCATCACCTGGACAACCT
TCATCGAAGCGACCACGGGCTGCAGTGCAGACGGCGGCACCCTCGCCATG
CCCCGAGACGCCGAGACCGACGCCTTCCTGATCTCCCTGTACAAGTCCGC
GAGCGACCACGAGCCCTTTTTGTATCATACGTACTTCTGGTTCGGCCTGC
ACGATCGGCGCAGAGAGGGAAGCTTTGCGTGGGTGGATGGCTCTGCGCTT
GGGACGTACAGCAACTGGGGACCGGCACAACCGAACGATTACTGGGGCAA
CCAAGACTGCGTTGTTTACTCGGCAAAATATCCAAAGGACAAGTGGGTCG
ACATGGGATGCGACGAGCTGTATCACTCCATATGCCAGGCTGTCCC Coding sequence (CDS) from alignment at Sc0000010:5869001..5870796+ >transcript:BL97456_cuf0 ID=transcript:BL97456_cuf0|Name=transcript:BL97456_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3321bp|location=Sequence derived from alignment at Sc0000010:5869001..5870796+ (Branchiostoma lanceolatum)
ATGAAAACATGGAAGATATCAAGAAAGGGTCTATTTAGAAAAGAAAATTT
AAAAAGTGCATCTCACATTACAGGTCAGATGGCAAAGATGCAAACGGAGA
TGGAGAGATTCAGGAATTACTTTCACGGCATCAATCCGCTACTGACGAAT
ATGAAGGGTATTCCATATCAGATCGCAGAACTGGAGGCGAGACAGGACGA
GTGCTGCTCGACTCTGGGTGACACCGTGGAAGAGCTGGCGTCCAGCGGTA
ACGGTTCGGCCGTTCGACAACTGGAGATGCAGAAAACTCAGCAGCAGGAG
TTGAGCTTGTTGGCGGCTGGTCATAGCGAGATCCGAACGTCTTTGGAGGC
GCTGTCTGCGGCCCTGCAACGGTTGGAGCGCGACCAAGACGACATGCGCC
AACTGTCCACCACTGTTGACGCCTTGAAGCGCGACCAAGACGACATGCGC
CAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAAGACGACATGCG
CCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAAGACGACATGC
GCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAACACGACATG
CGCCAACTGTCCACCACTGTTGACGCAATGAAGAGAGACCTGGACAAGGA
GCGAAACCGAACCGCCGCCTCGGATGAGATGAGGAAGACGTCAGTAACTT
GTCCCGATGGTTACACAATGTTCCGTGAAATCTGCTACAAGGCCTTCATC
ACCTGGACAACCTTCATCGAAGCGACCACGGGCTGCAGTGCAGACGGCGG
CACCCTCGCCATGCCCCGAGACGCCGAGACCGACGCCTTCCTGATCTCCC
TGTACAAGTCCGCGAGCGACCACGAGCCCTTTTTGTATCATACGTACTTC
TGGTTCGGCCTGCACGATCGGCGCAGAGAGGGAAGCTTTGCGTGGGTGGA
TGGCTCTGCGCTTGGGACGTACAGCAACTGGGGACCGGCACAACCGAACG
ATTACTGGGGCAACCAAGACTGCGTTGTTTACTCGGCAAAATATCCAAAG
GACAAGTGGGTCGACATGGGATGCGACGAGCTGTATCACTCCATATGCCA
GGCTGTCATGAAAACATGGAAGATATCAAGAAAGGGTCTATTTAGAAAAG
AAAATTTAAAAAGTGCATCTCACATTACAGGTCAGATGGCAAAGATGCAA
ACGGAGATGGAGAGATTCAGGAATTACTTTCACGGCATCAATCCGCTACT
GACGAATATGAAGGGTATTCCATATCAGATCGCAGAACTGGAGGCGAGAC
AGGACGAGTGCTGCTCGACTCTGGGTGACACCGTGGAAGAGCTGGCGTCC
AGCGGTAACGGTTCGGCCGTTCGACAACTGGAGATGCAGAAAACTCAGCA
GCAGGAGTTGAGCTTGTTGGCGGCTGGTCATAGCGAGATCCGAACGTCTT
TGGAGGCGCTGTCTGCGGCCCTGCAACGGTTGGAGCGCGACCAAGACGAC
ATGCGCCAACTGTCCACCACTGTTGACGCCTTGAAGCGCGACCAAGACGA
CATGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAAGACG
ACATGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAAGAC
GACATGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGACCAACA
CGACATGCGCCAACTGTCCACCACTGTTGACGCAATGAAGAGAGACCTGG
ACAAGGAGCGAAACCGAACCGCCGCCTCGGATGAGATGAGGAAGACGTCA
GTAACTTGTCCCGATGGTTACACAATGTTCCGTGAAATCTGCTACAAGGC
CTTCATCACCTGGACAACCTTCATCGAAGCGACCACGGGCTGCAGTGCAG
ACGGCGGCACCCTCGCCATGCCCCGAGACGCCGAGACCGACGCCTTCCTG
ATCTCCCTGTACAAGTCCGCGAGCGACCACGAGCCCTTTTTGTATCATAC
GTACTTCTGGTTCGGCCTGCACGATCGGCGCAGAGAGGGAAGCTTTGCGT
GGGTGGATGGCTCTGCGCTTGGGACGTACAGCAACTGGGGACCGGCACAA
CCGAACGATTACTGGGGCAACCAAGACTGCGTTGTTTACTCGGCAAAATA
TCCAAAGGACAAGTGGGTCGACATGGGATGCGACGAGCTGTATCACTCCA
TATGCCAGGCTGTCATGAAAACATGGAAGATATCAAGAAAGGGTCTATTT
AGAAAAGAAAATTTAAAAAGTGCATCTCACATTACAGGTCAGATGGCAAA
GATGCAAACGGAGATGGAGAGATTCAGGAATTACTTTCACGGCATCAATC
CGCTACTGACGAATATGAAGGGTATTCCATATCAGATCGCAGAACTGGAG
GCGAGACAGGACGAGTGCTGCTCGACTCTGGGTGACACCGTGGAAGAGCT
GGCGTCCAGCGGTAACGGTTCGGCCGTTCGACAACTGGAGATGCAGAAAA
CTCAGCAGCAGGAGTTGAGCTTGTTGGCGGCTGGTCATAGCGAGATCCGA
ACGTCTTTGGAGGCGCTGTCTGCGGCCCTGCAACGGTTGGAGCGCGACCA
AGACGACATGCGCCAACTGTCCACCACTGTTGACGCCTTGAAGCGCGACC
AAGACGACATGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGAC
CAAGACGACATGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCGA
CCAAGACGACATGCGCCAACTGTCCACCACTGTGGACGCCTTGAAGCGCG
ACCAACACGACATGCGCCAACTGTCCACCACTGTTGACGCAATGAAGAGA
GACCTGGACAAGGAGCGAAACCGAACCGCCGCCTCGGATGAGATGAGGAA
GACGTCAGTAACTTGTCCCGATGGTTACACAATGTTCCGTGAAATCTGCT
ACAAGGCCTTCATCACCTGGACAACCTTCATCGAAGCGACCACGGGCTGC
AGTGCAGACGGCGGCACCCTCGCCATGCCCCGAGACGCCGAGACCGACGC
CTTCCTGATCTCCCTGTACAAGTCCGCGAGCGACCACGAGCCCTTTTTGT
ATCATACGTACTTCTGGTTCGGCCTGCACGATCGGCGCAGAGAGGGAAGC
TTTGCGTGGGTGGATGGCTCTGCGCTTGGGACGTACAGCAACTGGGGACC
GGCACAACCGAACGATTACTGGGGCAACCAAGACTGCGTTGTTTACTCGG
CAAAATATCCAAAGGACAAGTGGGTCGACATGGGATGCGACGAGCTGTAT
CACTCCATATGCCAGGCTGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000010 | genome | Sc0000010:5869001..5870796 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97456_cuf0 |
| Biotype | protein_coding |
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