|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97452_cuf10 >transcript:BL97452_cuf10-protein ID=transcript:BL97452_cuf10-protein|Name=transcript:BL97452_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=109bp
MVKQVQSPSSTSRLVPYSPATVECLELGAARGDEGTPVFGAVCKGGQWGW
LARGSSLEVVNSQTGVRQGAWCFGRTQKDPMVTINCVKEYEYQKSVKLVV
GLQTGSGRG Run BLAST on NCBI mRNA from alignment at Sc0000010:5462058..5464887- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97452_cuf10 ID=transcript:BL97452_cuf10|Name=transcript:BL97452_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=2830bp|location=Sequence derived from alignment at Sc0000010:5462058..5464887- (Branchiostoma lanceolatum)
GAAAATGGCGCCTTCTGCGAACGATTTTGCGAAGTGAAAGTCGTTTCAGG
CCGTTTTTAGACAGTTTCATTTTACTAAAGCGAATATAAGGTAGGTGCAA
CATACAAGTGTACCTTACTGTTTGTATTAAGCCACAAACATTTGTTGATC
CGTCTAGAAATCTGTCGTAATTTTTAAAAAACTTTGTTCCCCCCTCCCCA
CTCCGCCAAAATATGGTGCCTCATTATGTTCATCTTGTCAAAAGATTTAA
CTTATTTATTTAATTAATATTTTTTGTGTAATCGATTTGAGGCCACGGAT
AGTTCCTGCTTAGGGTTTTCAGTGGGAAGCTGCTTAATTTTTTCCCCATA
GATTATTTCATTTTAATTGTGTAGCTGTTTCTTTACATAGGTCTGCAAAA
ATAATGGATATGAATATTATAACTTATGACTCCAAACTTGATGAACTTTA
GCTATACTTCATCTTAGTGTAATATTTCCCCCAGTATGACACCATCATTG
TATAATATAGCTCGACCTCTAGACTTCTGCCGTACCCACACTGTAGAGTG
TACAATCATACATGTACCTGTTGTTTCCATAACGAGTTGTTTCATTATCA
TGTTTTGCAGAGAGGTCCAAGATGGTGCAACAGGTCCAGTCCCCGAGCTC
CACCTCCAGACTTCTGCCGTACCCACACTGTAGAGTGTACAATCATACCT
GTTGTTTCATTAACGAGCTGTTTCACTAACGAGTTGTTTCATTATCATGT
TTCTGTCCCATTCCCAGCAGACGACAAGATGGTGCAACAGGTGCAGTCCC
CGAGCTCGACCTCCAGACTGGTGCCGTACCCACACTGTAGAGTGTACAAT
CATACCTGTTATTTCATTAACGAGCGGTTTCATTAACGAGTTGTTTCATT
ATCATGTTTCGCAGAGAGGTCCAAGATGGTGAAACAGGTGCAGTCCCCGA
GCTCCACCTCCAGACTTGTGCCCTACTCCCCGGCTACTGTGGAGTGTCTG
GAGTTAGGGGCAGCCCGGGGGGACGAGGGGACGCCGGTCTTCGGAGCAGT
CTGTAAAGGTGAGTTAATTTGTAGGTGTATCAGTGTGTTTGTTTATTTCA
CATAAACAGTATAACACTTGTCTGGCAACATGCGAATCACGCCAGTTTTG
TTTTGCAGGTACAAGCTGCATATTATTAAGACCAAACTGTAAAGTTTGAT
CCACTCACATTTCGAAGGACTCCTTGTCTTCCATGTTGGTAACACTGTCT
GTAGCCTTAGAATATCCCATTTTAAGTTAACGTAAAATTCTAAAACCCCC
ACAGAAGGGGGAGTCCACATCACCCCCCGCTCTGTCACTCTGCTCTTTTG
CAATGCCCTAAGATGATTGCTTTTTAGAAGTAGTATTGTTAAATGAATTA
GAGCCCTGAGTGTTTTATATATATATATATAACCTGTTCTCCAATCCATA
GGCCAGTGGGGCTGGTTAGCCAGGGGAGCACCCAGTATTTTAAGTGCTTC
ACTATGTATTAAGATGATAAAGATAAAACATTCCCCTGTATTTTAAACTG
ACTGTAATAAACCTATTCTCTGATCCCCAGGAGGGTTAGTTAGGCAGAGG
ATTTTCCAGTATTTTAAGTGCTATGTATTTAGATGATTGTTAACAATTGG
AGCCCTGAGTGTTTTATAAAGTGACTGTAACCTGTTCTCCGCCCCCCAGG
AGGCCAGTGGGGCTGGTTGGCCCGAGGTTCGTCCCTGGAGGTGGTGAACT
CCCAGACTGGGGTCAGACAGGGGGCGTGGTGCTTCGGCAGGACTCAGAAG
GATCCTATGGTGAGGATTTTATCAAAGACACAACTTATCTTTTTCTACAT
GTATATTATTGTAGTAATGTCCACTGTGCTCAACTGTTGCAGTGGTCTGA
ACATCCTGCAACTGCAATCAGTCTTTCTTCAATTCTATCCACTTTGTCCA
CTTTGTTGCTGTATTATGTACAAAAATGATATGTGCAGTCATTAATTTTT
GCAAGGATTTTATTTCGCGGTAGAGGGGGAAATAGGTTTTCACAGACGGT
GTTTTAAGTTCTCGGATGAAACGATTCTGTAGTCTAAGTAATTTACAATG
GAAACCTAAGGCATATTCTTGGTGTCATGAACTTGCAGTGGAGAAGTCGC
CACAAATACCGTGCAAATAAAAACACCAAATTTACAGTATTTTATTTTGA
TTTACCACATTTGTATTACCAAACAGGGCTCGAAATTCAGTTTTTGGAAT
AGGTGCACTGGTGCACCCAAGCTAAAAAATTGGGTGCACCAAAACAATGT
TGGGTGCACCACATAAAATAAAGTAGAATGTAACTATTGTAAGCAAAACC
TAATGACAAACCTTACTGTTCCTCTTCATGCGCGTTTGGCACGCGATCTC
GGCACGCAGTTTTGAAGCTTTCAAAATCGAAATTAACTCAAATTCTAACA
TCAAAATCTTAAACAAGTACTACAACAAAGATTGTATCATTTTCTTACAC
TTAGATGTCAAGAATATGCTCTCTACTAGTGTGCAGTGATACCTTACACA
TTAAACCGTATGAAAATATTTGGGTGCACCAGTGCACCCACAGTAAAAAA
ATTAGGTGCACAACTCCAAAATTGGGTGCACTGGGTGCACATGCACCCAG
TATTTCGAGCCCTGCCAAAGGAACCAACTTATCTACAAATTGATGCATTT
TTTCATTGTAACAGTTCTTCACCCAAGTATGATGTTGTATGTTCAGGTCA
CTATCAACTGTGTAAAGGAGTACGAGTACCAGAAGTCAGTGAAGCTTGTG
GTGGGACTGCAGACTGGTAGTGGCCGGGGG Coding sequence (CDS) from alignment at Sc0000010:5462058..5464887- >transcript:BL97452_cuf10 ID=transcript:BL97452_cuf10|Name=transcript:BL97452_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000010:5462058..5464887- (Branchiostoma lanceolatum)
ATGGTGAAACAGGTGCAGTCCCCGAGCTCCACCTCCAGACTTGTGCCCTA
CTCCCCGGCTACTGTGGAGTGTCTGGAGTTAGGGGCAGCCCGGGGGGACG
AGGGGACGCCGGTCTTCGGAGCAGTCTGTAAAGGAGGCCAGTGGGGCTGG
TTGGCCCGAGGTTCGTCCCTGGAGGTGGTGAACTCCCAGACTGGGGTCAG
ACAGGGGGCGTGGTGCTTCGGCAGGACTCAGAAGGATCCTATGGTCACTA
TCAACTGTGTAAAGGAGTACGAGTACCAGAAGTCAGTGAAGCTTGTGGTG
GGACTGCAGACTGGTAGTGGCCGGGGGATGGTGAAACAGGTGCAGTCCCC
GAGCTCCACCTCCAGACTTGTGCCCTACTCCCCGGCTACTGTGGAGTGTC
TGGAGTTAGGGGCAGCCCGGGGGGACGAGGGGACGCCGGTCTTCGGAGCA
GTCTGTAAAGGAGGCCAGTGGGGCTGGTTGGCCCGAGGTTCGTCCCTGGA
GGTGGTGAACTCCCAGACTGGGGTCAGACAGGGGGCGTGGTGCTTCGGCA
GGACTCAGAAGGATCCTATGGTCACTATCAACTGTGTAAAGGAGTACGAG
TACCAGAAGTCAGTGAAGCTTGTGGTGGGACTGCAGACTGGTAGTGGCCG
GGGGATGGTGAAACAGGTGCAGTCCCCGAGCTCCACCTCCAGACTTGTGC
CCTACTCCCCGGCTACTGTGGAGTGTCTGGAGTTAGGGGCAGCCCGGGGG
GACGAGGGGACGCCGGTCTTCGGAGCAGTCTGTAAAGGAGGCCAGTGGGG
CTGGTTGGCCCGAGGTTCGTCCCTGGAGGTGGTGAACTCCCAGACTGGGG
TCAGACAGGGGGCGTGGTGCTTCGGCAGGACTCAGAAGGATCCTATGGTC
ACTATCAACTGTGTAAAGGAGTACGAGTACCAGAAGTCAGTGAAGCTTGT
GGTGGGACTGCAGACTGGTAGTGGCCGGGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:5462058..5464887 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97452_cuf10 |
| Biotype | protein_coding |
|
