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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97447_cuf0 >transcript:BL97447_cuf0-protein ID=transcript:BL97447_cuf0-protein|Name=transcript:BL97447_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
PDTNRWDLVPPAAMTLRKSSVVECMGKIYVFGYHGDDSDVIEVQAFDPKS
GQWEVVNAAEHVGRNRQFQAASMDNLIYLNSMATKQKDVYDPDWDMWHTL
PRGDGEHIQGTIVMFDGCLYEMGGRDGIGVKYVNPTIERFDPNRTVWTQI
GLMKNPRIHPLCVTLSMPSGK Run BLAST on NCBI mRNA from alignment at Sc0000010:4796164..4798619- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97447_cuf0 ID=transcript:BL97447_cuf0|Name=transcript:BL97447_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2456bp|location=Sequence derived from alignment at Sc0000010:4796164..4798619- (Branchiostoma lanceolatum)
CCCAGACACAAACCGCTGGGATCTGGTCCCACCCGCCGCCATGACTCTTC
GCAAATCCAGCGTGGTGGAGTGCATGGGTAAGATCTACGTCTTCGGTTAC
CATGGAGACGACAGTGACGTCATAGAGGTGCAGGCGTTCGACCCGAAATC
CGGTCAGTGGGAAGTGGTGAATGCCGCGGAGCATGTCGGGAGGAACAGGT
GAGCAGCTTTCAATCCAAGATAGTTGCGGTTTGTAAATAATCAGCAAAAA
TATCATCATTACCTCAGTGAAAACTGAAATATCGTTATCGGTTGGTGTGT
TTGTTTGTTTGTTCTGGTGTGTGTCCGTAGTTGGGCAGCCTGCCAAGATG
TAAGGCGGAAATGGTGTAATAGGATACTTAGAGAATTGAATATCTGGTTT
GACTCTGATCCAATGTTGTTGACATGCAGGAAGTCATGACAACATCCACA
TACATCTGGATGCACATTTAGAGCTTGTTTCATATGGCGCTATATCTTGA
AATTGAAGCTTTTTATAGATGGTATTAGCGATGGAATATAGTAAATGGTC
AATATGCTTGTAATATACATCGTTTTACTTTAACTTTATATATCCACTAT
ACGTTTTAATGTGTTATCCATGAGAGCCCCTACAGGGACCCTGTCATTTT
GGATCATTTTGTGCTGTGTTGTAACTAATACAAAAACAACAACAACACAG
TTGTCATAGTATATTATCATTATCATTACCAGACAGTTCCAGGCTGCTTC
GATGGACAACCTGATCTACCTGAACTCCATGGCGACCAAACAGAAGGACG
TGTACGACCCGGACTGGGACATGTGGCACACGCTGCCGAGGGGCGACGGC
GAGCACATCCAGGTAAGACGTGAGCACGTACAGGTAAGACATGTACGATC
CGGACTGGGACATGTGGCACACGCTGCCGAGGGGCGACGGCGAGCACATA
CAGGTAAGACGTGAGCACATCCAGGTAAGACGTGAGCACGTACAGGTAAG
ACGTGAGCACGTACAGGTAAGACGTGAGCACGTACAGGTAAGACGTGAGC
ACGTACAGGTAAGACGTGAGCACATCCAGGTAAGACGTGAGCACGCACAG
TTTAGACGTGTACGATCCGGACTGGGACGTGTGGCACACGCTGCCGAGGG
GCGACGGCGAGCACATCCAGGTAGGATTGATTAATGGCTGAATGAGAGAC
TTTTCGTGCGTTTTAGTCTAAACCAACTTCAGCCTTACCTACTTACTTTA
CTTTGGTCGAGCTCCCGCTCGAACCAAGCTTGAAAGCTTCCTCCACTCCA
GTGCCCTATCTTCCATCAGGGACTGGATTTCCTTCACTTCAGTAAGGTTT
GTGTCGGCTCTTAGGGTATTGATGAAGGTGCCTTTTGGTCTTCCACGGCT
TCTCTTCCCTTTTGTGGGCTCCCTTACATGTATCACTAGTCTGGAGGTTA
TGATGTAAGGATGTCTGATGCAATGAGCAGCTAATTTCAGCCTTCTTCAT
GCTCGAATGACCAAGTGGCTAAAATGAGTAACGGAAAAACTGAGCGACTT
TTCGGGCGTTTTAGTCTTAACACCCTCCTTCAAGCTCGAATGACCAACCA
TTCAGGACAGGTGACATTAAGCTTCGGTGCCATTCAGGGTACTTCACTCC
CGTTCGTAATCAAAAACACCAAATAATTTCGGTTCCAAACTGTTGATAGA
TCCATATTCTTAACCTTTACTTGATCGCAGGGCACGATCGTGATGTTTGA
CGGCTGCCTGTACGAGATGGGCGGGCGTGACGGCATCGGGGTGAAGTACG
TGAACCCCACCATCGAGCGGTTCGACCCCAACCGCACGGTCTGGACTCAG
ATAGGACTCATGAAGAATCCCCGGATACACCCGCTCTGCGTCACGCTGAG
CATGCCCAGTGGCAAGTAGGTAGCAAAGAACCGCTTAGGACACTCATTAT
GGCTCACTGAGAGCTATCGGAGCTAACCCCAACCGGACGGACTAGACTCA
GATCCTAACGCGGTACGCTGAACTAACTTGCCCAGAGGCAAGTAGGTAGC
AAAGAGTGGTTTATTGGTTAGAAAGTACCCGTGCAATGGCAGCCCGTGCT
GAATTCCTGCAAGGTTTACAATCACATAGTACAGAACAGATACAGACTTG
CTCCACACTTGTACATTAGCTTAGCTCACTCTTCATGTTAAAAACCTGCT
ACTCGCCAAATCTTGCTCAGTGTCACTTACGAAAAGTAGTGGATGCTACT
TGAAACGTCTGACCGTTTCCAAAGTCATTTCCAGTTGCTTGAGTAACTGC
TATTTGGTGTATCTTGTTACCTGGATGTCTAACCTTCATCGACGTATGTA
GCAAGTAGGAATCGAAGAAACGCTTTGCTCACTGAAGGACTTAGCTCACT
GGAGAGCTGACCAGAGCTAACCCCGAACGGACAGTCTGGACTCCGATCTG
GACTTG Coding sequence (CDS) from alignment at Sc0000010:4796164..4798619- >transcript:BL97447_cuf0 ID=transcript:BL97447_cuf0|Name=transcript:BL97447_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1548bp|location=Sequence derived from alignment at Sc0000010:4796164..4798619- (Branchiostoma lanceolatum)
CCAGACACAAACCGCTGGGATCTGGTCCCACCCGCCGCCATGACTCTTCG
CAAATCCAGCGTGGTGGAGTGCATGGGTAAGATCTACGTCTTCGGTTACC
ATGGAGACGACAGTGACGTCATAGAGGTGCAGGCGTTCGACCCGAAATCC
GGTCAGTGGGAAGTGGTGAATGCCGCGGAGCATGTCGGGAGGAACAGACA
GTTCCAGGCTGCTTCGATGGACAACCTGATCTACCTGAACTCCATGGCGA
CCAAACAGAAGGACGTGTACGACCCGGACTGGGACATGTGGCACACGCTG
CCGAGGGGCGACGGCGAGCACATCCAGGGCACGATCGTGATGTTTGACGG
CTGCCTGTACGAGATGGGCGGGCGTGACGGCATCGGGGTGAAGTACGTGA
ACCCCACCATCGAGCGGTTCGACCCCAACCGCACGGTCTGGACTCAGATA
GGACTCATGAAGAATCCCCGGATACACCCGCTCTGCGTCACGCTGAGCAT
GCCCAGTGGCAAGTAGCCAGACACAAACCGCTGGGATCTGGTCCCACCCG
CCGCCATGACTCTTCGCAAATCCAGCGTGGTGGAGTGCATGGGTAAGATC
TACGTCTTCGGTTACCATGGAGACGACAGTGACGTCATAGAGGTGCAGGC
GTTCGACCCGAAATCCGGTCAGTGGGAAGTGGTGAATGCCGCGGAGCATG
TCGGGAGGAACAGACAGTTCCAGGCTGCTTCGATGGACAACCTGATCTAC
CTGAACTCCATGGCGACCAAACAGAAGGACGTGTACGACCCGGACTGGGA
CATGTGGCACACGCTGCCGAGGGGCGACGGCGAGCACATCCAGGGCACGA
TCGTGATGTTTGACGGCTGCCTGTACGAGATGGGCGGGCGTGACGGCATC
GGGGTGAAGTACGTGAACCCCACCATCGAGCGGTTCGACCCCAACCGCAC
GGTCTGGACTCAGATAGGACTCATGAAGAATCCCCGGATACACCCGCTCT
GCGTCACGCTGAGCATGCCCAGTGGCAAGTAGCCAGACACAAACCGCTGG
GATCTGGTCCCACCCGCCGCCATGACTCTTCGCAAATCCAGCGTGGTGGA
GTGCATGGGTAAGATCTACGTCTTCGGTTACCATGGAGACGACAGTGACG
TCATAGAGGTGCAGGCGTTCGACCCGAAATCCGGTCAGTGGGAAGTGGTG
AATGCCGCGGAGCATGTCGGGAGGAACAGACAGTTCCAGGCTGCTTCGAT
GGACAACCTGATCTACCTGAACTCCATGGCGACCAAACAGAAGGACGTGT
ACGACCCGGACTGGGACATGTGGCACACGCTGCCGAGGGGCGACGGCGAG
CACATCCAGGGCACGATCGTGATGTTTGACGGCTGCCTGTACGAGATGGG
CGGGCGTGACGGCATCGGGGTGAAGTACGTGAACCCCACCATCGAGCGGT
TCGACCCCAACCGCACGGTCTGGACTCAGATAGGACTCATGAAGAATCCC
CGGATACACCCGCTCTGCGTCACGCTGAGCATGCCCAGTGGCAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:4796164..4798619 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97447_cuf0 |
| Biotype | protein_coding |
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