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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97445_cuf3 >transcript:BL97445_cuf3-protein ID=transcript:BL97445_cuf3-protein|Name=transcript:BL97445_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=176bp
PIVSFRTRPSNQTAMLGDPVTLHCAAHEQNYLSVTWYKGGKALTPPFTQT
IFVLWNNDLLVIANRDNADKYTCELRRGHARILADAWITLESEIRFAEAP
VNATVKLGESHVFRCSPTGADRITWSKDGGPPSSFIDGERVLQNRGDLVL
TSVTRADSGRYTCTAGRDGDAQTIQA Run BLAST on NCBI mRNA from alignment at Sc0000010:5305960..5307381- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97445_cuf3 ID=transcript:BL97445_cuf3|Name=transcript:BL97445_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1422bp|location=Sequence derived from alignment at Sc0000010:5305960..5307381- (Branchiostoma lanceolatum)
GTCCCATCGGTAAGACATTTCTCATCACAGTGTCTTTAAGCGTATCGTTT
GCTTCTAGTCCGCCAGAATTATAGACGTGTGTTTTTAGATTTCTGAATTG
TAATTTAGTATCCCTTTTGAACTTCTGTACTTTACATATAGATTTTTTTA
ATTTTCATTGATATGAAATGACAATGCTGGTGACAGCTCTAAAGTAAATT
TCAATGCAGGGATTGGCAGTAGTAGGGTATAGGGGAAGCCTTCATTATCA
GCCAAATGCGACAACGCGTAACTCTTTTTGGCGACGCATCAGGGGCTGAG
CTTTCTTTTGGTATCCTTGGTGCTGAATCTGTAATCACCAATAACGTTAC
CTCTGGCGTTTCGATCAGTGTTGAAAATTACCAGTAAACCTATCTTTTGT
CGCTTTATCCTGTTTGTAGAGATGAAAAATATGCTTTTTCTAAACAATGG
CTTGAAAGTATTTCTATACCTGGTAGTGCAATGCGGCTCGCGAATTTTCA
ACAAAGCATACACTCTTGTACTCATGTACTATTCTTAATGATCGTATTTT
TTGTTTTTTATGTGCAGAGGTTCGATGCCATTGGCCAGTTTATGTCAAAC
TTATTTCAAAGCAATATCTTGATTTCTATCTGCAGTCTCATTCAGAACGA
GGCCATCGAACCAAACCGCCATGTTGGGCGATCCCGTCACCCTCCACTGC
GCCGCGCATGAGCAGAACTACCTCTCTGTCACGTGGTACAAAGGCGGGAA
AGCGTTGACCCCTCCATTCACACAGACGATATTCGTCCTCTGGAACAACG
ATCTTCTCGTCATCGCAAATAGAGACAACGCTGATAAGTATACCTGTGAA
CTAAGGAGGGGACATGCAAGGATACTGGCTGATGCTTGGATTACATTAGA
ATCTGGTATGTTCATATTCTTCAAGAGAAAAATTGCCATCCACTTGCATT
GGGTACACGTATCTGTTGTATACGTATTACAATTTGCTGAAGCCATGTTT
ATGATAGTTTAAGATTCCTAGAAAATATCACATTGTTCCCCTTAGGTTTT
CGTAAATGTACAGATATACGGTAATTTCTCATACTTTGATTCGATACAAA
TTGTAGTGCGAAAGTTTAGTATAGTCGAGAAACGGTGTTTATCTTTCTCA
AATGCTTCAATTTTATTACAGAGATTAGGTTCGCCGAGGCCCCAGTTAAT
GCTACCGTAAAACTCGGGGAGAGTCACGTGTTCAGATGCTCACCAACCGG
AGCAGACCGGATCACGTGGAGCAAAGATGGCGGGCCGCCGAGCTCGTTCA
TCGACGGGGAACGCGTCCTGCAGAACCGGGGAGACCTGGTGCTGACGTCC
GTAACCCGGGCGGACTCCGGCCGGTACACCTGCACCGCAGGGAGGGACGG
GGACGCGCAGACTATACAGGCC Coding sequence (CDS) from alignment at Sc0000010:5305960..5307381- >transcript:BL97445_cuf3 ID=transcript:BL97445_cuf3|Name=transcript:BL97445_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1584bp|location=Sequence derived from alignment at Sc0000010:5305960..5307381- (Branchiostoma lanceolatum)
CCCATCGTCTCATTCAGAACGAGGCCATCGAACCAAACCGCCATGTTGGG
CGATCCCGTCACCCTCCACTGCGCCGCGCATGAGCAGAACTACCTCTCTG
TCACGTGGTACAAAGGCGGGAAAGCGTTGACCCCTCCATTCACACAGACG
ATATTCGTCCTCTGGAACAACGATCTTCTCGTCATCGCAAATAGAGACAA
CGCTGATAAGTATACCTGTGAACTAAGGAGGGGACATGCAAGGATACTGG
CTGATGCTTGGATTACATTAGAATCTGAGATTAGGTTCGCCGAGGCCCCA
GTTAATGCTACCGTAAAACTCGGGGAGAGTCACGTGTTCAGATGCTCACC
AACCGGAGCAGACCGGATCACGTGGAGCAAAGATGGCGGGCCGCCGAGCT
CGTTCATCGACGGGGAACGCGTCCTGCAGAACCGGGGAGACCTGGTGCTG
ACGTCCGTAACCCGGGCGGACTCCGGCCGGTACACCTGCACCGCAGGGAG
GGACGGGGACGCGCAGACTATACAGGCCCCCATCGTCTCATTCAGAACGA
GGCCATCGAACCAAACCGCCATGTTGGGCGATCCCGTCACCCTCCACTGC
GCCGCGCATGAGCAGAACTACCTCTCTGTCACGTGGTACAAAGGCGGGAA
AGCGTTGACCCCTCCATTCACACAGACGATATTCGTCCTCTGGAACAACG
ATCTTCTCGTCATCGCAAATAGAGACAACGCTGATAAGTATACCTGTGAA
CTAAGGAGGGGACATGCAAGGATACTGGCTGATGCTTGGATTACATTAGA
ATCTGAGATTAGGTTCGCCGAGGCCCCAGTTAATGCTACCGTAAAACTCG
GGGAGAGTCACGTGTTCAGATGCTCACCAACCGGAGCAGACCGGATCACG
TGGAGCAAAGATGGCGGGCCGCCGAGCTCGTTCATCGACGGGGAACGCGT
CCTGCAGAACCGGGGAGACCTGGTGCTGACGTCCGTAACCCGGGCGGACT
CCGGCCGGTACACCTGCACCGCAGGGAGGGACGGGGACGCGCAGACTATA
CAGGCCCCCATCGTCTCATTCAGAACGAGGCCATCGAACCAAACCGCCAT
GTTGGGCGATCCCGTCACCCTCCACTGCGCCGCGCATGAGCAGAACTACC
TCTCTGTCACGTGGTACAAAGGCGGGAAAGCGTTGACCCCTCCATTCACA
CAGACGATATTCGTCCTCTGGAACAACGATCTTCTCGTCATCGCAAATAG
AGACAACGCTGATAAGTATACCTGTGAACTAAGGAGGGGACATGCAAGGA
TACTGGCTGATGCTTGGATTACATTAGAATCTGAGATTAGGTTCGCCGAG
GCCCCAGTTAATGCTACCGTAAAACTCGGGGAGAGTCACGTGTTCAGATG
CTCACCAACCGGAGCAGACCGGATCACGTGGAGCAAAGATGGCGGGCCGC
CGAGCTCGTTCATCGACGGGGAACGCGTCCTGCAGAACCGGGGAGACCTG
GTGCTGACGTCCGTAACCCGGGCGGACTCCGGCCGGTACACCTGCACCGC
AGGGAGGGACGGGGACGCGCAGACTATACAGGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:5305960..5307381 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97445_cuf3 |
| Biotype | protein_coding |
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