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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97441_cuf18 >transcript:BL97441_cuf18-protein ID=transcript:BL97441_cuf18-protein|Name=transcript:BL97441_cuf18|organism=Branchiostoma lanceolatum|type=polypeptide|length=195bp
VAQQDTKIADLTARLNLLERGDKPSSCSEAKSLHPHAGDGEYTLYPFTTN
TDVSLRVFCHDMASGSPKEFLSLPSGPDENYAIVFSDRLVDASHWQCTGG
LQDPYADRAGTTKFSKLRIQFDTSRIEVIRDDYTFAQTTGPNDVDYGHAG
DCYSANQECAKGTFKVNLTGTGLALAPEVHWVMEERWPESLTIND Run BLAST on NCBI mRNA from alignment at Sc0000010:4012494..4015412- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97441_cuf18 ID=transcript:BL97441_cuf18|Name=transcript:BL97441_cuf18|organism=Branchiostoma lanceolatum|type=mRNA|length=2919bp|location=Sequence derived from alignment at Sc0000010:4012494..4015412- (Branchiostoma lanceolatum)
CAGTGGCTCAACAGGTGATGTCATGTTCCAAACATTTATCTGAATTCCAT
CTATCTATTTGCTCAGTTAGAGCTGTTCAGGTAGCTGGTGGCTGCTGCAA
AGGGCTAGCATCGCTCACAAAAATATTATAAATCTGATGACAAAAACTCT
ATATCATCAACAAAATCTAAAGTTAATGATAATGACAATGACAATGAAGT
TTATTGCATATTCATGCCCAGCAGAGGGCTAAATGCATTACAGTATCATA
AGAATACTATAGAAAAAAATATGCTATACTTTAATTATGATTTACATGCT
TCTTCTCTCTTCTTGAAACATTTGTAGACAAATTCACAGAGTTTTTTCAT
TACATCGTAATTGGCTGTTGACATAACATGTGCGAACATTTCCTCCTTTG
TTAGATGTGCATATCTTCGGTCTAGCAATATAGAAATTCGCGTATACCGA
TTAAGGTCTGGGTCAGTATGTACATGTATACTACGAAGTGATTTCTAGTA
AAGGGAGCGTATTGTATTGATATGATATGTATCTTAACATCTTTGCTTCA
AAGAAAAAAAATGATATCAGAATGTCTTCAAATTGTTTTTACGGCAGAGA
GTATCTGACGTTGCTGCTACCACATACTCCAAAATGACGATGTATTTATA
AGTGATTACTGTCTAACTGTCATATGGACATAAATCTTCGAGATGTTAAA
CATAAATAATCTTGTTGCATCTGTTCCAGGATACCAAGATTGCTGACTTG
ACCGCAAGACTGAATCTTCTTGAACGGGGTGAGTCTTATCATTTCTATTT
ATAAATCTAATATTTCAGATCTGTTTATTTATTTTTGAATTCTTTCGCCA
GGTCTGCCAAACTAACCATCAGCTGTTACAAATATCTAGACCTGGGGTCG
GGACAAATACACAATATATAAGGAAACATAATACTTCTAGCATAACACTT
TAAAGAAATAAGGTCAAAGCTATCATCTCACTAAGAGAGGTCAGGTCAAT
AGAAGTGATGATATATGTTTGGTTTTGAAGATGCAAACAGTGCCAAATCT
CTTGCCAGTTTGACCTCAATTAGGGTTATGGTATGTTTGGTAGGCTTCAC
CCTTAAACCTGACGTTTATCAATCCAGCATTGATCTCCATGGGTTTGCTT
GGATGCCCTAGGAGTGATAATGATTTATAGCCTCCGTTGCAGAATCCTTC
CGGCTGTTTTCTTTCTCAAGTTATAGTTTTACTATTACATTTTTTTTCTT
GTTCCCGGCCAGCAACAAGAAAGAAAATGTAATAGTAAAACTATAACTTG
AGAAAGCAAACAGCCGTAAGGAGTTTGCAACGGAGGCTAGGTGATTTATA
GCTGATTGAGCTTGCGCCTTTCTGTCTAGCACTCCGGTTCTCTGTAAAGA
TACTACTAAAGAAAATATTTCAAAATACCGCATGTAACTGGTCTTGGCTG
AGGCAAGCATGGCACTTGTACTTTTCCACAACATTTGATACAAACATAAA
CTATCTATTCCAGGTGACAAGCCTTCATCGTGCTCAGAAGCGAAGTCTCT
ACACCCCCATGCCGGCGATGGAGAGTACACACTCTACCCTTTTACAACGA
ACACGGATGTATCCCTCCGCGTCTTCTGCCACGACATGGCATCAGGGAGC
CCGAAAGAGTTCCTGTCCCTACCCTCCGGTCCTGATGAGAACTACGCCAT
TGTCTTTTCCGATCGCCTGGTCGACGCAAGTCACTGGCAATGCACCGGCG
GATTGCAGGTAAGTGAAACCGTTGATAGAAATGTAAAGCCGCTCACCTCG
GTGACCGTTAAGTTGGAAGAGTTACTAGACCACTCCGACCAATCGTCCTC
CTTGAAACTCCTATTCGAATCAGCCATGACCCGACAAATTCGCTTTCTAA
GTTGCCTCAACGACTAAATCTGGCAAAACAAACTCGCCAGTGCTCTGTGG
GAAGGTGTCGGCTTGAAAAGGATGTATTCAGATTGACAATGATGGCAGTT
TGGAAATGATACAAGCCAACCACCATTACACCTTTCAAAAAAAGTAGATT
CTATTACTTTTATTCATGACTTATTCGAATCGGACTAGTCTTTCGAAGTG
GTCGATTGGTCGGGGTGTAGACTGTGCCTTAGCATATACTCTCAGCAAAC
TTTCAGTAAACCTCATGGCTGCATTTTGCATAATTGTCTTAAAGTACAAG
GTAAGGCCAATGCCGTTGTTGGTGATTATTGTCTTCAGGACCCATATGCC
GACCGTGCCGGTACCACGAAGTTCAGCAAGCTGAGAATCCAGTTTGATAC
GTCCAGGATCGAGGTCATTCGAGATGACTACACCTTTGCCCAAACCACTG
GTAGGTCAACGCTTAATGATAAGTTCAACATTACCCCTGAGTTGCAATGT
AGACAGTTATTAGTGCTGCATGTAAAAGATCTATCGATGGCGAACTTGCA
AAAATACCTCAGAATAAAACGTCAGAAAAAGGACGTTTCTTTTGCTTTTA
TGGTGACGGTATCAGTCAAAATCTTGCTTGTCAAAGACTTTTTTTGTAGT
TTGTTCTATACTGTTTATTTTCAAGTAAACTTGCGTACCTTTTGCTAAGG
ACTAACGTTTACAAATATCTTCTATGTCTGTATAACTGCCCTTCGGTGTA
ACACACCAGCTCCACATGCACGCGACACGACAGCAGCTGGCTATATTACA
CCGAACTACCTGTCACACCTATCTAATGACTTCCCATTTGTTTTGACAAC
AGGACCCAACGATGTAGACTACGGGCACGCTGGCGACTGTTATTCGGCGA
ACCAGGAATGTGCTAAGGGCACGTTCAAGGTAAACCTGACTGGAACGGGA
CTCGCGCTGGCCCCTGAGGTCCACTGGGTTATGGAGGAGCGCTGGCCGGA
ATCTCTGACCATCAATGAC Coding sequence (CDS) from alignment at Sc0000010:4012494..4015412- >transcript:BL97441_cuf18 ID=transcript:BL97441_cuf18|Name=transcript:BL97441_cuf18|organism=Branchiostoma lanceolatum|type=CDS|length=2925bp|location=Sequence derived from alignment at Sc0000010:4012494..4015412- (Branchiostoma lanceolatum)
GTGGCTCAACAGGATACCAAGATTGCTGACTTGACCGCAAGACTGAATCT
TCTTGAACGGGGTGACAAGCCTTCATCGTGCTCAGAAGCGAAGTCTCTAC
ACCCCCATGCCGGCGATGGAGAGTACACACTCTACCCTTTTACAACGAAC
ACGGATGTATCCCTCCGCGTCTTCTGCCACGACATGGCATCAGGGAGCCC
GAAAGAGTTCCTGTCCCTACCCTCCGGTCCTGATGAGAACTACGCCATTG
TCTTTTCCGATCGCCTGGTCGACGCAAGTCACTGGCAATGCACCGGCGGA
TTGCAGGACCCATATGCCGACCGTGCCGGTACCACGAAGTTCAGCAAGCT
GAGAATCCAGTTTGATACGTCCAGGATCGAGGTCATTCGAGATGACTACA
CCTTTGCCCAAACCACTGGACCCAACGATGTAGACTACGGGCACGCTGGC
GACTGTTATTCGGCGAACCAGGAATGTGCTAAGGGCACGTTCAAGGTAAA
CCTGACTGGAACGGGACTCGCGCTGGCCCCTGAGGTCCACTGGGTTATGG
AGGAGCGCTGGCCGGAATCTCTGACCATCAATGACGTGGCTCAACAGGAT
ACCAAGATTGCTGACTTGACCGCAAGACTGAATCTTCTTGAACGGGGTGA
CAAGCCTTCATCGTGCTCAGAAGCGAAGTCTCTACACCCCCATGCCGGCG
ATGGAGAGTACACACTCTACCCTTTTACAACGAACACGGATGTATCCCTC
CGCGTCTTCTGCCACGACATGGCATCAGGGAGCCCGAAAGAGTTCCTGTC
CCTACCCTCCGGTCCTGATGAGAACTACGCCATTGTCTTTTCCGATCGCC
TGGTCGACGCAAGTCACTGGCAATGCACCGGCGGATTGCAGGACCCATAT
GCCGACCGTGCCGGTACCACGAAGTTCAGCAAGCTGAGAATCCAGTTTGA
TACGTCCAGGATCGAGGTCATTCGAGATGACTACACCTTTGCCCAAACCA
CTGGACCCAACGATGTAGACTACGGGCACGCTGGCGACTGTTATTCGGCG
AACCAGGAATGTGCTAAGGGCACGTTCAAGGTAAACCTGACTGGAACGGG
ACTCGCGCTGGCCCCTGAGGTCCACTGGGTTATGGAGGAGCGCTGGCCGG
AATCTCTGACCATCAATGACGTGGCTCAACAGGATACCAAGATTGCTGAC
TTGACCGCAAGACTGAATCTTCTTGAACGGGGTGACAAGCCTTCATCGTG
CTCAGAAGCGAAGTCTCTACACCCCCATGCCGGCGATGGAGAGTACACAC
TCTACCCTTTTACAACGAACACGGATGTATCCCTCCGCGTCTTCTGCCAC
GACATGGCATCAGGGAGCCCGAAAGAGTTCCTGTCCCTACCCTCCGGTCC
TGATGAGAACTACGCCATTGTCTTTTCCGATCGCCTGGTCGACGCAAGTC
ACTGGCAATGCACCGGCGGATTGCAGGACCCATATGCCGACCGTGCCGGT
ACCACGAAGTTCAGCAAGCTGAGAATCCAGTTTGATACGTCCAGGATCGA
GGTCATTCGAGATGACTACACCTTTGCCCAAACCACTGGACCCAACGATG
TAGACTACGGGCACGCTGGCGACTGTTATTCGGCGAACCAGGAATGTGCT
AAGGGCACGTTCAAGGTAAACCTGACTGGAACGGGACTCGCGCTGGCCCC
TGAGGTCCACTGGGTTATGGAGGAGCGCTGGCCGGAATCTCTGACCATCA
ATGACGTGGCTCAACAGGATACCAAGATTGCTGACTTGACCGCAAGACTG
AATCTTCTTGAACGGGGTGACAAGCCTTCATCGTGCTCAGAAGCGAAGTC
TCTACACCCCCATGCCGGCGATGGAGAGTACACACTCTACCCTTTTACAA
CGAACACGGATGTATCCCTCCGCGTCTTCTGCCACGACATGGCATCAGGG
AGCCCGAAAGAGTTCCTGTCCCTACCCTCCGGTCCTGATGAGAACTACGC
CATTGTCTTTTCCGATCGCCTGGTCGACGCAAGTCACTGGCAATGCACCG
GCGGATTGCAGGACCCATATGCCGACCGTGCCGGTACCACGAAGTTCAGC
AAGCTGAGAATCCAGTTTGATACGTCCAGGATCGAGGTCATTCGAGATGA
CTACACCTTTGCCCAAACCACTGGACCCAACGATGTAGACTACGGGCACG
CTGGCGACTGTTATTCGGCGAACCAGGAATGTGCTAAGGGCACGTTCAAG
GTAAACCTGACTGGAACGGGACTCGCGCTGGCCCCTGAGGTCCACTGGGT
TATGGAGGAGCGCTGGCCGGAATCTCTGACCATCAATGACGTGGCTCAAC
AGGATACCAAGATTGCTGACTTGACCGCAAGACTGAATCTTCTTGAACGG
GGTGACAAGCCTTCATCGTGCTCAGAAGCGAAGTCTCTACACCCCCATGC
CGGCGATGGAGAGTACACACTCTACCCTTTTACAACGAACACGGATGTAT
CCCTCCGCGTCTTCTGCCACGACATGGCATCAGGGAGCCCGAAAGAGTTC
CTGTCCCTACCCTCCGGTCCTGATGAGAACTACGCCATTGTCTTTTCCGA
TCGCCTGGTCGACGCAAGTCACTGGCAATGCACCGGCGGATTGCAGGACC
CATATGCCGACCGTGCCGGTACCACGAAGTTCAGCAAGCTGAGAATCCAG
TTTGATACGTCCAGGATCGAGGTCATTCGAGATGACTACACCTTTGCCCA
AACCACTGGACCCAACGATGTAGACTACGGGCACGCTGGCGACTGTTATT
CGGCGAACCAGGAATGTGCTAAGGGCACGTTCAAGGTAAACCTGACTGGA
ACGGGACTCGCGCTGGCCCCTGAGGTCCACTGGGTTATGGAGGAGCGCTG
GCCGGAATCTCTGACCATCAATGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:4012494..4015412 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97441_cuf18 |
| Biotype | protein_coding |
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