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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97437_cuf2 >transcript:BL97437_cuf2-protein ID=transcript:BL97437_cuf2-protein|Name=transcript:BL97437_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=154bp
MNGCLSHPCQYGGTCHPIGLSRYYCRCTDGYISRDCDPNEIRPPPRPDPC
SSRPCRNGGVCVSDGPTFSCVCRDGYHGDVCQTVVRRPAPTEPPEAEPSF
LLHRVVIPAVVSLLFGIVFLAVLRRCSDKTDFQVAPEEPEEKVEHFSTSE
DEEE Run BLAST on NCBI mRNA from alignment at Sc0000010:5342671..5344379+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97437_cuf2 ID=transcript:BL97437_cuf2|Name=transcript:BL97437_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1709bp|location=Sequence derived from alignment at Sc0000010:5342671..5344379+ (Branchiostoma lanceolatum)
GACGAAAGAACCGAATTATTTAAACAAGTTATCACGAAATATCCCTACTT
TTGCACATTCACGGATGAACAAAAAGCTACCTTTCTCTTGAAATCACAGA
ACCCACAAATACTAGAAAAAGTGGGACTTTTCGTCTTCCACTGCTTCCAA
AAAAGAAGTCAAACCCAGCTAATTTAGATATAGCCAAAAATTGTATATAG
TACCAGTAACCTATTGTTACAGCAAAGTCAGACACAGTTTACTGACGCAT
GTATGTTTTTCCTATGTTTTTATCATGTATTTGCAATTAGCCCACGGGCA
TGAACTTGCAATAAACTTCTACTAATCACGTATAAAGGACAATGTGGAAA
ATGTCAAGGCATTTGATGAATGGTGCCATGTGTGTTGAGCCCCCGCAGAA
ATGAACGGCTGTCTGTCCCACCCGTGCCAGTACGGAGGAACCTGCCACCC
TATCGGCCTGTCCCGGTACTACTGCAGGTGCACGGACGGCTACATCTCCA
GGGACTGCGATCCCAGTGAGTTGTATTTCTATGTCATCTATGTCTAGCTT
GATCCAACACAGAAAAGTAAAAAGGCTAAGGCCGATGTAGTCTGTAGACA
GTGTTGCCACTGAATCAAAAACCAATGCAGTGGTCGCGCCTGTTAGCGTG
AAGTTTGCGCTCATTTGAGCTATGTTGGTAATTGCGTTTTTTGTTCTTTA
ACATCTTTTAAAAGCATCCAATCAAATTGATGCCCATTTACTCCAATTGG
CGACATATTAGAGCAGATTGGTGGATGTTGGTGCCAGTTGGCGAATGTCT
TTCACAAGTAATCGCTCAAGCGCCTATCTTTCCTGCAGACGAGATCCGGC
CGCCGCCCAGACCCGACCCCTGCTCCAGTCGGCCATGTCGGAACGGTGGC
GTCTGTGTGTCGGACGGACCGACCTTCAGCTGTGTCTGCAGAGACGGTTA
CCATGGCGACGTGTGTCAGACAGTCGTCCGGCGGCCTGCTCCGACAGGTG
GGTGGCGGGAAGTTACTGTTGTTATCGCCGTAGAAACGGTTTCCATGGTG
ACGAGTGTCAGACTGTCGTCCTAGATCCTACGGCCTGCTCTGACGGGTGG
GTGGCGGGACGTTACTGTTTTTATCACCGTAGAAACGGTTTCCATGGTGA
CGAGTGTCAGACTGTCGTCCTACGGCCTGCTCCGACGGGTGGGTGGCGGG
AAGTTACTGTTGTTATCGCCATAGAAACGGTCACCATGGTTACTTGCGTC
AGACTTTCGTCCAAGGATCAGACCCCGAGGGCTAGTTCGCCTGTCTCGGG
CCAATATATATGACTATACTTTGTAACGGGCACAACACTTACATTATTCA
TTAATTCATTCATTCATTCATTCATTCATTCATTCATTCACTCACTTACT
TACTCACTCATTCATAATATCTGTTAAGGATGTTTGGCCATAAAGCAGAA
TTAAAGAATTGTTTTCTATTTCCGTGGACAGAAATTGAGATCCTCTCCAT
CTCTATTTCTATTTCTCACAGAGCCCCCCGAGGCCGAACCGTCCTTCCTG
CTACACCGCGTAGTGATCCCCGCTGTCGTGTCACTCCTGTTCGGAATCGT
CTTTCTGGCCGTCTTAAGACGATGCAGCGACAAGACGGACTTCCAGGTGG
CCCCTGAGGAGCCGGAGGAGAAAGTAGAACATTTCTCTACAAGCGAAGAC
GAAGAAGAA Coding sequence (CDS) from alignment at Sc0000010:5342671..5344379+ >transcript:BL97437_cuf2 ID=transcript:BL97437_cuf2|Name=transcript:BL97437_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1386bp|location=Sequence derived from alignment at Sc0000010:5342671..5344379+ (Branchiostoma lanceolatum)
ATGAACGGCTGTCTGTCCCACCCGTGCCAGTACGGAGGAACCTGCCACCC
TATCGGCCTGTCCCGGTACTACTGCAGGTGCACGGACGGCTACATCTCCA
GGGACTGCGATCCCAACGAGATCCGGCCGCCGCCCAGACCCGACCCCTGC
TCCAGTCGGCCATGTCGGAACGGTGGCGTCTGTGTGTCGGACGGACCGAC
CTTCAGCTGTGTCTGCAGAGACGGTTACCATGGCGACGTGTGTCAGACAG
TCGTCCGGCGGCCTGCTCCGACAGAGCCCCCCGAGGCCGAACCGTCCTTC
CTGCTACACCGCGTAGTGATCCCCGCTGTCGTGTCACTCCTGTTCGGAAT
CGTCTTTCTGGCCGTCTTAAGACGATGCAGCGACAAGACGGACTTCCAGG
TGGCCCCTGAGGAGCCGGAGGAGAAAGTAGAACATTTCTCTACAAGCGAA
GACGAAGAAGAAATGAACGGCTGTCTGTCCCACCCGTGCCAGTACGGAGG
AACCTGCCACCCTATCGGCCTGTCCCGGTACTACTGCAGGTGCACGGACG
GCTACATCTCCAGGGACTGCGATCCCAACGAGATCCGGCCGCCGCCCAGA
CCCGACCCCTGCTCCAGTCGGCCATGTCGGAACGGTGGCGTCTGTGTGTC
GGACGGACCGACCTTCAGCTGTGTCTGCAGAGACGGTTACCATGGCGACG
TGTGTCAGACAGTCGTCCGGCGGCCTGCTCCGACAGAGCCCCCCGAGGCC
GAACCGTCCTTCCTGCTACACCGCGTAGTGATCCCCGCTGTCGTGTCACT
CCTGTTCGGAATCGTCTTTCTGGCCGTCTTAAGACGATGCAGCGACAAGA
CGGACTTCCAGGTGGCCCCTGAGGAGCCGGAGGAGAAAGTAGAACATTTC
TCTACAAGCGAAGACGAAGAAGAAATGAACGGCTGTCTGTCCCACCCGTG
CCAGTACGGAGGAACCTGCCACCCTATCGGCCTGTCCCGGTACTACTGCA
GGTGCACGGACGGCTACATCTCCAGGGACTGCGATCCCAACGAGATCCGG
CCGCCGCCCAGACCCGACCCCTGCTCCAGTCGGCCATGTCGGAACGGTGG
CGTCTGTGTGTCGGACGGACCGACCTTCAGCTGTGTCTGCAGAGACGGTT
ACCATGGCGACGTGTGTCAGACAGTCGTCCGGCGGCCTGCTCCGACAGAG
CCCCCCGAGGCCGAACCGTCCTTCCTGCTACACCGCGTAGTGATCCCCGC
TGTCGTGTCACTCCTGTTCGGAATCGTCTTTCTGGCCGTCTTAAGACGAT
GCAGCGACAAGACGGACTTCCAGGTGGCCCCTGAGGAGCCGGAGGAGAAA
GTAGAACATTTCTCTACAAGCGAAGACGAAGAAGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:5342671..5344379 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97437_cuf2 |
| Biotype | protein_coding |
|
