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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97431_cuf1 >transcript:BL97431_cuf1-protein ID=transcript:BL97431_cuf1-protein|Name=transcript:BL97431_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=283bp
KCFSETGLIKPGVFAGLGRVKLGTLSLTNNRLRHVPTEAIEHIGNITDLN
LSGNNISAVGPKDFGHHTYFFTLDLSDNKLTSLPEEALMSVDIFMLELSG
NPLVYIGPDAFKHGLFHVGLENTKLRVIDESAFNSSQGIKSLTLNNNSLN
YLPELVFAPLTFYGDPQEILLLDDNPWRCDCQMRDYAKWLQSALNVWVLH
CDAPQRLHGKVLRDVPVDQLTCDCPHLTSPNISTAGSTTVVTAGQRAVLK
CSVTCCPAAAVVWTTPAGMKLSVDSDVTGISVS Run BLAST on NCBI mRNA from alignment at Sc0000061:1180729..1183607+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97431_cuf1 ID=transcript:BL97431_cuf1|Name=transcript:BL97431_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2879bp|location=Sequence derived from alignment at Sc0000061:1180729..1183607+ (Branchiostoma lanceolatum)
TGAAGTGTTTCTCGGAGACGGGTTTGATAAAGCCCGGTGTGTTCGCCGGA
CTTGGCCGTGTTAAGTTGGGGACATTGAGCCTGACGAACAACAGGCTACG
TCACGTTCCCACAGAAGCCATTGAGCACATAGGCAATATTACCGACCTGA
ATCTGTCCGGAAACAACATCTCAGCTGTCGGTCCCAAGGACTTTGGCCAT
CACACGTACTTCTTCACACTAGACTTGAGGTATGTGTTTGGGGTTGGTTG
GAAAGAGCTCTCTCTCTCTCAGCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCACTCTCTCTGTGCCAGTGTCACAGAGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGCCTGTTTGTGTGTGTGTATGTGAGTGCGTCAGTGTGTGT
GTGTGTGTGTGCGTGCGTGCGTACGTGCGCGCGTGCGTATATATACATTA
TCAACAAACACTTTCCATGTACAGTGACAACAAACTGACGTCGTTACCAG
AGGAGGCTCTGATGTCTGTGGACATCTTCATGTTGGAACTGTCCGGAAAT
CCGCTTGTGTACATCGGACCGGATGCCTTCAAACACGGACTCTTCCACGT
TGGTCTGGAAAATACCAAGCTCCGAGTCATAGGTACGTCAAAGCCCGATT
CACAAGGGTCATAGGATGATCATTTGCACCAATAAGCCTTAGATATTGGT
GGGAATTTCATACTTGCATCGATTGGAAGCTAAGTGAAGGTTATAGATAA
ATCATGCAAATTAGGGCCTAATTTACATAACTGTTGAGGGAATGATACAA
TAGGCTACTTTGCTTTATAATTCATGCAAATAAGGACCTCGCTAGCATAT
AATCAAGGATAAATCGTCACTCAAAAAAACGAAGGTGTGAGATCGGTGAA
CGTTGTTTAGCTTGAAATCAACAGCAGCATTGTATATAAATGTTTTATGG
TATGAGCCTCATCTCAGAAAAAAACAACAATGATAAGCCAGATCGATATG
CCCACTTTGCATAGTCTCGTAGTCCTGTATCTATACCCTGATAGCATGTG
GACTAAACGATGAAATTGCATTTTTCATTAAGAAATCACAAAATGGACAT
ACTACTTGATGAAGTCATAGTTCAACAAGCCTACTAAGTAGGAGAGTTCC
TGTGTTTGTGATGTTGTTTAGATGAGTCAGCGTTCAACAGCTCTCAGGGC
ATCAAATCCCTCACCCTGAACAACAACAGTCTGAACTACCTCCCCGAGCT
GGTCTTTGCCCCACTGACGTTCTATGGTGACCCCCAGGAAATCCTTCTAC
TGGATGACAACCCCTGGAGGTGCGACTGTCAGATGCGCGACTACGCGAAA
TGGCTGCAGTCCGCTTTGGTAAAGCATTTTATTTCTGTCATGATTACCAA
GGGTAGTCTAACTCAGTGATATGGCCACTAGTGCTTTAGAATGGGGCTCT
GGATCACAAATAACATAAAATCGCATACCAGAGCGTACATGTACAGATAC
ATAACAACAAACAAATTCAACATACAGTACATAATAATGATAGGGGAAGG
GCTAGCAACCGCTCTCTGTAAGAACAAGAAAAACTGGCGCCCTATATCAC
TAAGCACTACAAGGTTAGCAGCATCAACATAATGATAATGATGACGATGC
CAATGAATAAATAAAGTCATAATATTCCGGATGAGTAATTATATTTCAAT
TCCAATGATAAACGATGATATTGTTTCTGGGCATCATTTTCCTACAATGT
TTTTTATACATTAACATTTTCGTCAGAAATCATTTTGTAGTGTGTGTGTA
GTCCTTGAAGCGACTAACCCAGTCTTGTTACAGAACGTATGGGTACTTCA
TTGTGACGCGCCACAACGTCTGCATGGTAAAGTGCTGCGGGACGTGCCTG
TGGACCAGCTGACATGTGACTGTCCCCATCTCACTTCTCCCAACATCAGC
ACCGCAGGCAGCACCACTGTGGTCACGGCAGGCCAGAGGGCCGTGCTGAA
GTGTAGCGTAAGTTCGGCATCCTTATGTTGTGCCAAGTTTAATAGGCCAA
ACAAACTGATTGGATGAAATTCTCTGGGCACCCAAAAGCTGATGCGAGCG
TGCGAAAAGGAACGTTCGTACCTTCATTACGAAATCTAACTGGTCAGAAA
TGTTGAACAAATGACTAAACACACAGGACATTGTATAACAAATAATACAT
TTTTGTTCTTTCACATCTTCTATGACTTTAGAGGACTTAGCCAATTGATA
TCCATTTTCCAATATTTTCTTTCAATTTACTGAGCATATTTTCTCATTTT
TCATCTTCTTTGTACGATTCACAGTATGGTCGCAAACCTTTTTTCTTCAC
GTTGGAAACGGACGCAATCCATATAACAAAATTATGGTGTGACCGTATCA
TTATATGGATCTGGAATCCATATGGAAAATAACATCTAACAATATATATT
TTTTTCAAGTCAACGATCCCCTCCGATTTGACTGAACCTTAGCTTCCTTC
GCAGACCTTCTAGGTGCGACCGGCATTTCGATGATATTTCTGGGGAGCGC
TGATTTGCGATTTTCAACGTGGGCCAGGCTCGAGGAGCTCGATAGCACAT
GCAAATCAGCGCTCCCTCCAAAATGAAAAAAAAAAAAAAAAAAAAAAAAT
CTGCCGCACCTAGAAGGTCTGCGANAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAACGTCTGCCGCACCTAGAAGGTCTGCGAAGGAGGCAAATGCATTAA
TGAACCAAAGGGTGAAACTTGTTCCCCTCGATCAGGTCACGTGCTGCCCT
GCCGCAGCTGTCGTCTGGACGACCCCGGCCGGGATGAAGCTGAGCGTAGA
CTCTGACGTCACAGGTATCTCCGTGTCTG Coding sequence (CDS) from alignment at Sc0000061:1180729..1183607+ >transcript:BL97431_cuf1 ID=transcript:BL97431_cuf1|Name=transcript:BL97431_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=4245bp|location=Sequence derived from alignment at Sc0000061:1180729..1183607+ (Branchiostoma lanceolatum)
AAGTGTTTCTCGGAGACGGGTTTGATAAAGCCCGGTGTGTTCGCCGGACT
TGGCCGTGTTAAGTTGGGGACATTGAGCCTGACGAACAACAGGCTACGTC
ACGTTCCCACAGAAGCCATTGAGCACATAGGCAATATTACCGACCTGAAT
CTGTCCGGAAACAACATCTCAGCTGTCGGTCCCAAGGACTTTGGCCATCA
CACGTACTTCTTCACACTAGACTTGAGTGACAACAAACTGACGTCGTTAC
CAGAGGAGGCTCTGATGTCTGTGGACATCTTCATGTTGGAACTGTCCGGA
AATCCGCTTGTGTACATCGGACCGGATGCCTTCAAACACGGACTCTTCCA
CGTTGGTCTGGAAAATACCAAGCTCCGAGTCATAGATGAGTCAGCGTTCA
ACAGCTCTCAGGGCATCAAATCCCTCACCCTGAACAACAACAGTCTGAAC
TACCTCCCCGAGCTGGTCTTTGCCCCACTGACGTTCTATGGTGACCCCCA
GGAAATCCTTCTACTGGATGACAACCCCTGGAGGTGCGACTGTCAGATGC
GCGACTACGCGAAATGGCTGCAGTCCGCTTTGAACGTATGGGTACTTCAT
TGTGACGCGCCACAACGTCTGCATGGTAAAGTGCTGCGGGACGTGCCTGT
GGACCAGCTGACATGTGACTGTCCCCATCTCACTTCTCCCAACATCAGCA
CCGCAGGCAGCACCACTGTGGTCACGGCAGGCCAGAGGGCCGTGCTGAAG
TGTAGCGTCACGTGCTGCCCTGCCGCAGCTGTCGTCTGGACGACCCCGGC
CGGGATGAAGCTGAGCGTAGACTCTGACGTCACAGGTATCTCCGTGTCTA
AGTGTTTCTCGGAGACGGGTTTGATAAAGCCCGGTGTGTTCGCCGGACTT
GGCCGTGTTAAGTTGGGGACATTGAGCCTGACGAACAACAGGCTACGTCA
CGTTCCCACAGAAGCCATTGAGCACATAGGCAATATTACCGACCTGAATC
TGTCCGGAAACAACATCTCAGCTGTCGGTCCCAAGGACTTTGGCCATCAC
ACGTACTTCTTCACACTAGACTTGAGTGACAACAAACTGACGTCGTTACC
AGAGGAGGCTCTGATGTCTGTGGACATCTTCATGTTGGAACTGTCCGGAA
ATCCGCTTGTGTACATCGGACCGGATGCCTTCAAACACGGACTCTTCCAC
GTTGGTCTGGAAAATACCAAGCTCCGAGTCATAGATGAGTCAGCGTTCAA
CAGCTCTCAGGGCATCAAATCCCTCACCCTGAACAACAACAGTCTGAACT
ACCTCCCCGAGCTGGTCTTTGCCCCACTGACGTTCTATGGTGACCCCCAG
GAAATCCTTCTACTGGATGACAACCCCTGGAGGTGCGACTGTCAGATGCG
CGACTACGCGAAATGGCTGCAGTCCGCTTTGAACGTATGGGTACTTCATT
GTGACGCGCCACAACGTCTGCATGGTAAAGTGCTGCGGGACGTGCCTGTG
GACCAGCTGACATGTGACTGTCCCCATCTCACTTCTCCCAACATCAGCAC
CGCAGGCAGCACCACTGTGGTCACGGCAGGCCAGAGGGCCGTGCTGAAGT
GTAGCGTCACGTGCTGCCCTGCCGCAGCTGTCGTCTGGACGACCCCGGCC
GGGATGAAGCTGAGCGTAGACTCTGACGTCACAGGTATCTCCGTGTCTAA
GTGTTTCTCGGAGACGGGTTTGATAAAGCCCGGTGTGTTCGCCGGACTTG
GCCGTGTTAAGTTGGGGACATTGAGCCTGACGAACAACAGGCTACGTCAC
GTTCCCACAGAAGCCATTGAGCACATAGGCAATATTACCGACCTGAATCT
GTCCGGAAACAACATCTCAGCTGTCGGTCCCAAGGACTTTGGCCATCACA
CGTACTTCTTCACACTAGACTTGAGTGACAACAAACTGACGTCGTTACCA
GAGGAGGCTCTGATGTCTGTGGACATCTTCATGTTGGAACTGTCCGGAAA
TCCGCTTGTGTACATCGGACCGGATGCCTTCAAACACGGACTCTTCCACG
TTGGTCTGGAAAATACCAAGCTCCGAGTCATAGATGAGTCAGCGTTCAAC
AGCTCTCAGGGCATCAAATCCCTCACCCTGAACAACAACAGTCTGAACTA
CCTCCCCGAGCTGGTCTTTGCCCCACTGACGTTCTATGGTGACCCCCAGG
AAATCCTTCTACTGGATGACAACCCCTGGAGGTGCGACTGTCAGATGCGC
GACTACGCGAAATGGCTGCAGTCCGCTTTGAACGTATGGGTACTTCATTG
TGACGCGCCACAACGTCTGCATGGTAAAGTGCTGCGGGACGTGCCTGTGG
ACCAGCTGACATGTGACTGTCCCCATCTCACTTCTCCCAACATCAGCACC
GCAGGCAGCACCACTGTGGTCACGGCAGGCCAGAGGGCCGTGCTGAAGTG
TAGCGTCACGTGCTGCCCTGCCGCAGCTGTCGTCTGGACGACCCCGGCCG
GGATGAAGCTGAGCGTAGACTCTGACGTCACAGGTATCTCCGTGTCTAAG
TGTTTCTCGGAGACGGGTTTGATAAAGCCCGGTGTGTTCGCCGGACTTGG
CCGTGTTAAGTTGGGGACATTGAGCCTGACGAACAACAGGCTACGTCACG
TTCCCACAGAAGCCATTGAGCACATAGGCAATATTACCGACCTGAATCTG
TCCGGAAACAACATCTCAGCTGTCGGTCCCAAGGACTTTGGCCATCACAC
GTACTTCTTCACACTAGACTTGAGTGACAACAAACTGACGTCGTTACCAG
AGGAGGCTCTGATGTCTGTGGACATCTTCATGTTGGAACTGTCCGGAAAT
CCGCTTGTGTACATCGGACCGGATGCCTTCAAACACGGACTCTTCCACGT
TGGTCTGGAAAATACCAAGCTCCGAGTCATAGATGAGTCAGCGTTCAACA
GCTCTCAGGGCATCAAATCCCTCACCCTGAACAACAACAGTCTGAACTAC
CTCCCCGAGCTGGTCTTTGCCCCACTGACGTTCTATGGTGACCCCCAGGA
AATCCTTCTACTGGATGACAACCCCTGGAGGTGCGACTGTCAGATGCGCG
ACTACGCGAAATGGCTGCAGTCCGCTTTGAACGTATGGGTACTTCATTGT
GACGCGCCACAACGTCTGCATGGTAAAGTGCTGCGGGACGTGCCTGTGGA
CCAGCTGACATGTGACTGTCCCCATCTCACTTCTCCCAACATCAGCACCG
CAGGCAGCACCACTGTGGTCACGGCAGGCCAGAGGGCCGTGCTGAAGTGT
AGCGTCACGTGCTGCCCTGCCGCAGCTGTCGTCTGGACGACCCCGGCCGG
GATGAAGCTGAGCGTAGACTCTGACGTCACAGGTATCTCCGTGTCTAAGT
GTTTCTCGGAGACGGGTTTGATAAAGCCCGGTGTGTTCGCCGGACTTGGC
CGTGTTAAGTTGGGGACATTGAGCCTGACGAACAACAGGCTACGTCACGT
TCCCACAGAAGCCATTGAGCACATAGGCAATATTACCGACCTGAATCTGT
CCGGAAACAACATCTCAGCTGTCGGTCCCAAGGACTTTGGCCATCACACG
TACTTCTTCACACTAGACTTGAGTGACAACAAACTGACGTCGTTACCAGA
GGAGGCTCTGATGTCTGTGGACATCTTCATGTTGGAACTGTCCGGAAATC
CGCTTGTGTACATCGGACCGGATGCCTTCAAACACGGACTCTTCCACGTT
GGTCTGGAAAATACCAAGCTCCGAGTCATAGATGAGTCAGCGTTCAACAG
CTCTCAGGGCATCAAATCCCTCACCCTGAACAACAACAGTCTGAACTACC
TCCCCGAGCTGGTCTTTGCCCCACTGACGTTCTATGGTGACCCCCAGGAA
ATCCTTCTACTGGATGACAACCCCTGGAGGTGCGACTGTCAGATGCGCGA
CTACGCGAAATGGCTGCAGTCCGCTTTGAACGTATGGGTACTTCATTGTG
ACGCGCCACAACGTCTGCATGGTAAAGTGCTGCGGGACGTGCCTGTGGAC
CAGCTGACATGTGACTGTCCCCATCTCACTTCTCCCAACATCAGCACCGC
AGGCAGCACCACTGTGGTCACGGCAGGCCAGAGGGCCGTGCTGAAGTGTA
GCGTCACGTGCTGCCCTGCCGCAGCTGTCGTCTGGACGACCCCGGCCGGG
ATGAAGCTGAGCGTAGACTCTGACGTCACAGGTATCTCCGTGTCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000061 | genome | Sc0000061:1180729..1183607 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97431_cuf1 |
| Biotype | protein_coding |
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