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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97430_cuf0 >transcript:BL97430_cuf0-protein ID=transcript:BL97430_cuf0-protein|Name=transcript:BL97430_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=255bp
TGSAEATMTQSWISAIFVAVVTVVTRACPDGCQCFKDVPSVHCNAPDLDH
IPQGIPGNTTLLQMQGTKLAIVRKGDLKGLPLLSSLYLSGNRLQTIEVGV
FDDTPALVDLEAGNNQITELSTGVFRGLDKLQEVHLSMNSITDIPAGVFS
SRPNLQIVDLQKNKITSIQPGAFSNLPNSDVFELSDNNIGNIKDGVFQGP
QGATELMLGNNNISSIEPTALMALKKLTLLSLDNNIISAIGGVLHNLENL
DVLSA Run BLAST on NCBI mRNA from alignment at Sc0000061:1178484..1180382+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97430_cuf0 ID=transcript:BL97430_cuf0|Name=transcript:BL97430_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1899bp|location=Sequence derived from alignment at Sc0000061:1178484..1180382+ (Branchiostoma lanceolatum)
CACAGGTTCGGCAGAGGCTACCATGACCCAGAGTTGGATTTCCGCCATTT
TCGTCGCTGTTGTGACAGTGGTGACACGTGCGTGTCCTGACGGATGCCAG
TGCTTCAAAGATGTTCCCTCCGTACACTGTAACGCCCCTGACCTAGACCA
TATCCCACAAGGCATCCCGGGAAACACTACGCTTCTCCAGATGCAAGGTT
AGCCATACAGCGATAGATATACTGGACCGTCGTATTTATTATCTACACCT
CATGTAACACGGGTTGTTGTTTAAAATGGCCACCTTATCTTAACTACCTC
AGTGAAAGCGGAGGCATTGTTTCTGGTCTGTGTATCGTTCGTCTCGGTGT
GGTAGAGACGAGAGTTCGTATTTATTTGAACATTGCAGAGTGAAAGGATG
TGAAGCGGAAGATGGTGTAAGCGGAGACTGGCATAGTTGATCCCGCAGGC
TGGCTGGAAAATGCATGGACAGAATTAGCGAGAATATGACAACAATGATT
ACGAAAAGATATTTATAAAACCTGTGGGCTATATATATTCAAAACTAAGC
TCTATTTTTGATTTCCTAGTCTACAAGCGCTAGATTCATATCATACGTGT
AGTTGCATTTACGACACATACGCAAGAGTGCAGTGCAAGTGCTCAATCTT
CTGAACAAGGGACAGTAGCAAGAGTGCTTAGAATCCGGATCGTGTCCGCG
ACAACTGAGTCATCACCACCGATCTATTGATATCCTCTAACATCTCATTT
ACTTCCTTCTATCATAGGTACAAAGCTCGCTATTGTTAGAAAGGGCGATC
TGAAGGGCCTTCCTCTTTTGAGCTCTCTGTACCTGTCCGGAAACCGACTG
CAAACGATAGAAGTCGGTGTGTTTGACGACACTCCCGCCCTGGTGGACTT
GGAGGCAGGAAACAACCAAATCACTGAGCTATCTACTGGGGTCTTCCGTG
GGCTCGACAAACTTCAGGAGGTGCACCTCAGTATGAACAGCATCACTGAT
ATTCCCGCCGGGGTCTTCTCATCGCGGCCTAATCTACAGGTAATGTTAAG
TCTAATCACAAGGCTACTCTAAGCTATATTTAGAAAAGAAAATGGTCACA
TCTGTTCTGTTTTGATCAATGATTAATCCGGACATTCATCGAAAAGTTAA
ATGGTAGAGATCTATTTTTCACCAACAAGTTACGAGGCTTAATCATGACC
TCATGATCGGGTGTGAAGCGTAAACGTAATCGCCAAAAATAGTTACTCAA
ACGTATTCATTGTCTGAAGACACGCTTAGAAGATGACTTAAAGTGGTACT
GTCTGTCATCTTAATGTATAAGTCGTGCCGAAGGAACTTCTCAGGAGTGA
CGCTCGTCTTATCCATGATCACTTTGTCTAATAACATCAGACTAGACAGT
CAAGCTAGCACATTTATCATTGACCTACATGAATAAAACTATACACGCAG
TTACCCTAAGATGTTTCATTTGAACTTAAGAGTATAGTAAAGTACTTAAC
AGATTTGTTTTAGGATTGGCAAAAGAATATTCATTCTTGAGCCAAATCGT
TTGATAGCTCTCATGCCATGATCAGATGTAGACTGTTTACAACTCTTCTC
AGATTGTGGACCTCCAGAAGAACAAGATCACGTCCATCCAACCCGGAGCC
TTCTCTAATTTACCAAATTCTGATGTCTTCGAACTCAGCGATAATAACAT
CGGAAACATCAAAGATGGCGTCTTCCAGGGTCCCCAAGGTGCCACAGAGC
TCATGCTCGGGAACAACAACATTTCCTCCATCGAACCCACCGCGCTCATG
GCACTCAAAAAGCTGACACTACTCAGTTTGGATAACAACATCATTTCAGC
TATAGGTGGTGTGCTACACAATCTCGAGAACCTTGACGTCCTGTCAGCG Coding sequence (CDS) from alignment at Sc0000061:1178484..1180382+ >transcript:BL97430_cuf0 ID=transcript:BL97430_cuf0|Name=transcript:BL97430_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2295bp|location=Sequence derived from alignment at Sc0000061:1178484..1180382+ (Branchiostoma lanceolatum)
ACAGGTTCGGCAGAGGCTACCATGACCCAGAGTTGGATTTCCGCCATTTT
CGTCGCTGTTGTGACAGTGGTGACACGTGCGTGTCCTGACGGATGCCAGT
GCTTCAAAGATGTTCCCTCCGTACACTGTAACGCCCCTGACCTAGACCAT
ATCCCACAAGGCATCCCGGGAAACACTACGCTTCTCCAGATGCAAGGTAC
AAAGCTCGCTATTGTTAGAAAGGGCGATCTGAAGGGCCTTCCTCTTTTGA
GCTCTCTGTACCTGTCCGGAAACCGACTGCAAACGATAGAAGTCGGTGTG
TTTGACGACACTCCCGCCCTGGTGGACTTGGAGGCAGGAAACAACCAAAT
CACTGAGCTATCTACTGGGGTCTTCCGTGGGCTCGACAAACTTCAGGAGG
TGCACCTCAGTATGAACAGCATCACTGATATTCCCGCCGGGGTCTTCTCA
TCGCGGCCTAATCTACAGATTGTGGACCTCCAGAAGAACAAGATCACGTC
CATCCAACCCGGAGCCTTCTCTAATTTACCAAATTCTGATGTCTTCGAAC
TCAGCGATAATAACATCGGAAACATCAAAGATGGCGTCTTCCAGGGTCCC
CAAGGTGCCACAGAGCTCATGCTCGGGAACAACAACATTTCCTCCATCGA
ACCCACCGCGCTCATGGCACTCAAAAAGCTGACACTACTCAGTTTGGATA
ACAACATCATTTCAGCTATAGGTGGTGTGCTACACAATCTCGAGAACCTT
GACGTCCTGTCAGCGACAGGTTCGGCAGAGGCTACCATGACCCAGAGTTG
GATTTCCGCCATTTTCGTCGCTGTTGTGACAGTGGTGACACGTGCGTGTC
CTGACGGATGCCAGTGCTTCAAAGATGTTCCCTCCGTACACTGTAACGCC
CCTGACCTAGACCATATCCCACAAGGCATCCCGGGAAACACTACGCTTCT
CCAGATGCAAGGTACAAAGCTCGCTATTGTTAGAAAGGGCGATCTGAAGG
GCCTTCCTCTTTTGAGCTCTCTGTACCTGTCCGGAAACCGACTGCAAACG
ATAGAAGTCGGTGTGTTTGACGACACTCCCGCCCTGGTGGACTTGGAGGC
AGGAAACAACCAAATCACTGAGCTATCTACTGGGGTCTTCCGTGGGCTCG
ACAAACTTCAGGAGGTGCACCTCAGTATGAACAGCATCACTGATATTCCC
GCCGGGGTCTTCTCATCGCGGCCTAATCTACAGATTGTGGACCTCCAGAA
GAACAAGATCACGTCCATCCAACCCGGAGCCTTCTCTAATTTACCAAATT
CTGATGTCTTCGAACTCAGCGATAATAACATCGGAAACATCAAAGATGGC
GTCTTCCAGGGTCCCCAAGGTGCCACAGAGCTCATGCTCGGGAACAACAA
CATTTCCTCCATCGAACCCACCGCGCTCATGGCACTCAAAAAGCTGACAC
TACTCAGTTTGGATAACAACATCATTTCAGCTATAGGTGGTGTGCTACAC
AATCTCGAGAACCTTGACGTCCTGTCAGCGACAGGTTCGGCAGAGGCTAC
CATGACCCAGAGTTGGATTTCCGCCATTTTCGTCGCTGTTGTGACAGTGG
TGACACGTGCGTGTCCTGACGGATGCCAGTGCTTCAAAGATGTTCCCTCC
GTACACTGTAACGCCCCTGACCTAGACCATATCCCACAAGGCATCCCGGG
AAACACTACGCTTCTCCAGATGCAAGGTACAAAGCTCGCTATTGTTAGAA
AGGGCGATCTGAAGGGCCTTCCTCTTTTGAGCTCTCTGTACCTGTCCGGA
AACCGACTGCAAACGATAGAAGTCGGTGTGTTTGACGACACTCCCGCCCT
GGTGGACTTGGAGGCAGGAAACAACCAAATCACTGAGCTATCTACTGGGG
TCTTCCGTGGGCTCGACAAACTTCAGGAGGTGCACCTCAGTATGAACAGC
ATCACTGATATTCCCGCCGGGGTCTTCTCATCGCGGCCTAATCTACAGAT
TGTGGACCTCCAGAAGAACAAGATCACGTCCATCCAACCCGGAGCCTTCT
CTAATTTACCAAATTCTGATGTCTTCGAACTCAGCGATAATAACATCGGA
AACATCAAAGATGGCGTCTTCCAGGGTCCCCAAGGTGCCACAGAGCTCAT
GCTCGGGAACAACAACATTTCCTCCATCGAACCCACCGCGCTCATGGCAC
TCAAAAAGCTGACACTACTCAGTTTGGATAACAACATCATTTCAGCTATA
GGTGGTGTGCTACACAATCTCGAGAACCTTGACGTCCTGTCAGCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000061 | genome | Sc0000061:1178484..1180382 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97430_cuf0 |
| Biotype | protein_coding |
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