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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97427_cuf7 >transcript:BL97427_cuf7-protein ID=transcript:BL97427_cuf7-protein|Name=transcript:BL97427_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=148bp
TGSYFRCLNLQQIGFSLRCNGIRDCTDGSDEINCIGGDRIRLVGGPFPYL
GRVEVRPVDSNDWGTVCDDSFDLQDATVVCRMLGYERAAQYHDEAYFGEG
SGTIYMDELRCSGSESSLFDCGYDGWGIHNCGHGEDVGVTCGEHCSRT Run BLAST on NCBI mRNA from alignment at Sc0000055:971014..974949- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97427_cuf7 ID=transcript:BL97427_cuf7|Name=transcript:BL97427_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3936bp|location=Sequence derived from alignment at Sc0000055:971014..974949- (Branchiostoma lanceolatum)
CCACGGGCTCCTACTTCAGATGTCTCAACCTTCAGCAGATTGGCTTCTCT
CTGCGGTGTAACGGAATCAGAGATTGCACAGATGGAAGCGACGAGATTAA
CTGCATAGGTGATGCACGCACCTCTTCCTTTATGTATACATGTACATTTA
TCACAACAATAACAGTGTAGTATAATTTTTTGGTGTTTTTTAATGGTGTG
CATTGGCTGCAGTAACCGGTGCGATGGCCGAGTGGGTAGAGTGTTCGCAT
TATATACAGTAGGTCGTGAGTTCGAACCCCGGCCGGGTCATACCAAAGAC
TCTAAAAATGGTACATACTGCTTTCTCTGCTTAGCGCTCAGCATTTGGGA
AAGAGCACGGTAGTTAAACACACACCACTACCAGTGGACTAGCCCCCTGC
TGTAGTGACTTGCACAAGGTTGTGCGGCGGCGGCTGTGGCCCAATGACTG
CCGAAACGGAGATGGGTGCCGCTTTATGCAACTTCGGTGCAGGAAGGACT
TTATGATCGTAAAGCACCCTATAGGTTAAACTCTTTGTGAATGGTTAATA
ACAACAGACTTTTGTTTTTCAAAATGTTTTTTTTTTTCTGATGTAGGCGG
AGACAGGATTCGGCTGGTCGGGGGTCCATTTCCGTACCTGGGTCGTGTTG
AGGTTCGGCCGGTCGATTCCAATGACTGGGGAACGGTATGTGACGACAGT
TTTGACATGCAAGACGCGACAGTTGTCTGCAGGATGCTGGGATACAGACG
TGCCGCACAATATCACAGCGGGGCGTATTTTGGCCAAGGTAAATCTCTTT
TTTATTCAATCTCTAAATAGTTATATAAACTTTTTGTTCTTGCCCGTTAA
TTGAAGTAGCCAGAAATTCCAGATCTCAGTCATGCAGAAGAACTTGTTTT
TGTCAGTGAAGATAGACATTTTCCTGATAATATGATATCTCGTACGTCCA
TGACAGGAAGCGGAAACATCTACATGGATGACCTTCGGTGTTCTGGGAGT
GAGTCTAGCCTGTTTGATTGCGGGTACCGCGGATGGGGCATTGACGACTG
CAGCCATAGTGAGGACGTTGGTGTGACTTGTGGTGAGCATGGTAGTTTAA
CTTGAAGCTATGTGTCGCTGTTCCAACACCCCCTCCCCCCAACCAGCACT
ACGGTGTGGAGAACGCAACTTATCAAGCATGAATGAGAACATAGGGGCTA
ATTTTCCAATGACATCCTCTCAAGCCAGGCCCGGCGCTTGTGTTAGGCCC
TGACCTACCTACCAGCGATGCGTTAGCACCGGTCACCCACTAGCCAATCG
TAAACTCCCCTGCCTGTTTGTGGAGGGAGTATTACCAACCAATCACGACG
CCCCATATTGGCAGGCCTGGTTGAGGGTGGCCAATGGGCGAGAGACCACC
AGTTAGATCATGGGCATTTGGCCTCAGCTCCGCGGACTCAATAAACAATA
GCGAGTTTTCTTCCCCGCTGAGCAGTTGCGTTAGACTCTCCCGGTCGGTA
GTTATGCAAATACCCGTCGGCCTCCCGTCGTCCCTTGCGCGAAAGTCGCT
CGGCGAAGCTAACTTCAAAATATCATTCCTCGCTCCGCTCGGAATTCGCT
CTTGGCGCCTGCGGCGCCACGGGGCGCGCCCTTCGGGCGCGCTTCGGGGG
CGCGCGCTTCCGGCGGAATTCGGGCGAGGGCGGCTTTCGGGTAAGTTCGG
GATCCGCGCGCCCTTCGGGCGAGGGCGGCTTTCGGGCCTATCAAACTCTT
CGGGCGTATCAAACTCTCCTTCCGAGGCCTACAGCCTATGGTTAGATACG
TGAAATGTTGATTGGTGTTGTGCTACAACTATTATTTGATTGAAGTATGT
GGAAGCAAGCCTAAAAATGTTGGGATTTACTTGATGTTAATTTCCACCTT
TCGGCAGATTCCAATTCCGGTGACAGTAGTAGAATCCGCTTGAGTGGAGG
TAGCAGCAGCAACGAAGGTCGTGTGGAGGTCAGACCGGCCGACAGTTACG
AATGGGGCACCGTCTGTGACGATGAGTTTGACCTAAATGACGCCAACGTC
GTATGTAGAATGCTGGGATATTCCAGCGCTTCAGCCGTACGAAACTCAGC
ATACTTTGGAGCAGGTAGGTAATGATGTTGTATGAATTTTCACATTTACG
AACGTCGCAGAACAGATACTAACGGTAAAAAGGTGTGCAGCAGAAAACAG
TGTGGAAGCTCGCAGGGGAAATGCACATGTGCTGTATGTTGACACGTTTG
ATAGATAGATCCGACCTGGTTTCGTGGCTCTTTTAATCCCAGCGTCTTTT
ATTGTCTACGTTTCCAGGCACGGGACCCATCTACATGGATAACCTGGAGT
GCACTGGGACCGAGACCAGCCTATTCTCCTGCGCTTATAACGGTTGGGGG
ATCGATAACTGTGGTCACAGTGAGGATGCAGGGGTTGTATGTGGTGGGTA
AAGGATGTTGTTTCGGTATAAAATAAATACAATAAAAACTGGAAGCACAT
AGCATAATTGCATGTCCCTTTTGGTACCTAGACGAAATGTCTTGATACGC
GCGTTCCGACTGGATCTCCGTGTGTGATGGGGACGGCATTAATTTGTGTG
ATCTCAGAAACAGCAATGTCATTGGCCAATGGACGATACTGTAACGGTCT
TCAGCTCCAGACCTTCCAGTCTAGTTGCAATAGCCTGACAGCCTCCCTTA
CTGCCGATGGACACAGAACGTCTGATAATTCGAACTTCAATATATCAATT
ATACAATTTAGCCATGTAGTTCAGGTTCATGACGATTTCATCACAGTACT
AGTGTAGCGTCAATTGATTTTATGCTTTCATGGTGTATATTGGTCGCTGA
TGGTCTGGAGTATGGAGATGACCTTAAACACCCTACAAACCTTTTGTAAA
TGCAAATTAACAACAGACATTTGTTATCCCAAATTTTGTGTCTAGTGAGG
GACGTAGACGCAGACAGGATTCGCCTGGTCGGAGGTCCTTTTCCGAACCT
GGGTCGTGTTGAGGTTCGACCGGTCGATTCCAATGACTGGGGGACGGTTT
GTGACGACAGTTTTGACCTTCAAGACGCTACAGTTGTCTGCAGGATGCTG
GGATACGAACGTGCCGCACAATACCACGATGAAGCATATTTTGGCGAAGG
TACATTCTTTTCATATTCGATCTTTATGTCGTTATACCCTTTTTATTCTT
GTACGTTAATTGAAGTAGGAAGCAATTCCAATTCTTGCACCAAAGCTTGA
AAGTTTTGCTTGAATGTCCTTTTAGGTTTTCTACCTAAGACACTTTAATT
TTCTGTCTTTGCCATGCTCCCTTGGTTAAATAGCATCTTTCTACCTTTCA
CTTATACATGTAGGTCTCCGTTTGTCAACACCAGCGTCGACTATTCTCTT
TTTGAACGTGAATGCAAGTTTTTCTTATGGATTATCTATACCACAATGCG
CATTAATGTTGACTGTTTAATTCTAATGGATGAGAAGTTGCATTGTGTGT
GTTTTTTTTTCTCGTGAAGTAGACATTTTTCTAATAATGTAGTATCTCGC
ACGTCCATGACAGGGAGCGGAACTATCTACATGGATGAGCTGCGGTGTTC
TGGGAGCGAGTCTAGCCTGTTTGACTGCGGGTACGACGGATGGGGCATTC
ACAACTGTGGGCATGGCGAGGACGTTGGTGTGACTTGTGGTGAGCATTGT
AGTCGAACTTGAAGCTTTTCAAATTTCCTAAAAGTCTTGATCTTGTTCTT
CATATTTCTCTCCTCAGCCAATGTGGAGAAAGTAACTTATCGGGCATGAG
TTGAACCATGGAGGCTAATTTGTCAATGCCATCCTCTCAAGATAGGCCCG
GCGCTTTTATGATCTTTTATGTGTCCAGCAAAACCCCTGGGCCTGCGATC
CGGCCTTCTCGCTTCGTTCGCGCTGGTCAGCCAATC Coding sequence (CDS) from alignment at Sc0000055:971014..974949- >transcript:BL97427_cuf7 ID=transcript:BL97427_cuf7|Name=transcript:BL97427_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1788bp|location=Sequence derived from alignment at Sc0000055:971014..974949- (Branchiostoma lanceolatum)
ACGGGCTCCTACTTCAGATGTCTCAACCTTCAGCAGATTGGCTTCTCTCT
GCGGTGTAACGGAATCAGAGATTGCACAGATGGAAGCGACGAGATTAACT
GCATAGGCGGAGACAGGATTCGGCTGGTCGGGGGTCCATTTCCGTACCTG
GGTCGTGTTGAGGTTCGACCGGTCGATTCCAATGACTGGGGGACGGTTTG
TGACGACAGTTTTGACCTTCAAGACGCTACAGTTGTCTGCAGGATGCTGG
GATACGAACGTGCCGCACAATACCACGATGAAGCATATTTTGGCGAAGGG
AGCGGAACTATCTACATGGATGAGCTGCGGTGTTCTGGGAGCGAGTCTAG
CCTGTTTGACTGCGGGTACGACGGATGGGGCATTCACAACTGTGGGCATG
GCGAGGACGTTGGTGTGACTTGTGGTGAGCATTGTAGTCGAACTTGAACG
GGCTCCTACTTCAGATGTCTCAACCTTCAGCAGATTGGCTTCTCTCTGCG
GTGTAACGGAATCAGAGATTGCACAGATGGAAGCGACGAGATTAACTGCA
TAGGCGGAGACAGGATTCGGCTGGTCGGGGGTCCATTTCCGTACCTGGGT
CGTGTTGAGGTTCGACCGGTCGATTCCAATGACTGGGGGACGGTTTGTGA
CGACAGTTTTGACCTTCAAGACGCTACAGTTGTCTGCAGGATGCTGGGAT
ACGAACGTGCCGCACAATACCACGATGAAGCATATTTTGGCGAAGGGAGC
GGAACTATCTACATGGATGAGCTGCGGTGTTCTGGGAGCGAGTCTAGCCT
GTTTGACTGCGGGTACGACGGATGGGGCATTCACAACTGTGGGCATGGCG
AGGACGTTGGTGTGACTTGTGGTGAGCATTGTAGTCGAACTTGAACGGGC
TCCTACTTCAGATGTCTCAACCTTCAGCAGATTGGCTTCTCTCTGCGGTG
TAACGGAATCAGAGATTGCACAGATGGAAGCGACGAGATTAACTGCATAG
GCGGAGACAGGATTCGGCTGGTCGGGGGTCCATTTCCGTACCTGGGTCGT
GTTGAGGTTCGACCGGTCGATTCCAATGACTGGGGGACGGTTTGTGACGA
CAGTTTTGACCTTCAAGACGCTACAGTTGTCTGCAGGATGCTGGGATACG
AACGTGCCGCACAATACCACGATGAAGCATATTTTGGCGAAGGGAGCGGA
ACTATCTACATGGATGAGCTGCGGTGTTCTGGGAGCGAGTCTAGCCTGTT
TGACTGCGGGTACGACGGATGGGGCATTCACAACTGTGGGCATGGCGAGG
ACGTTGGTGTGACTTGTGGTGAGCATTGTAGTCGAACTTGAACGGGCTCC
TACTTCAGATGTCTCAACCTTCAGCAGATTGGCTTCTCTCTGCGGTGTAA
CGGAATCAGAGATTGCACAGATGGAAGCGACGAGATTAACTGCATAGGCG
GAGACAGGATTCGGCTGGTCGGGGGTCCATTTCCGTACCTGGGTCGTGTT
GAGGTTCGACCGGTCGATTCCAATGACTGGGGGACGGTTTGTGACGACAG
TTTTGACCTTCAAGACGCTACAGTTGTCTGCAGGATGCTGGGATACGAAC
GTGCCGCACAATACCACGATGAAGCATATTTTGGCGAAGGGAGCGGAACT
ATCTACATGGATGAGCTGCGGTGTTCTGGGAGCGAGTCTAGCCTGTTTGA
CTGCGGGTACGACGGATGGGGCATTCACAACTGTGGGCATGGCGAGGACG
TTGGTGTGACTTGTGGTGAGCATTGTAGTCGAACTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:971014..974949 - |
Properties
| Property Name | Value |
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| Transcript id | BL97427_cuf7 |
| Biotype | protein_coding |
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