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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97424_cuf2 >transcript:BL97424_cuf2-protein ID=transcript:BL97424_cuf2-protein|Name=transcript:BL97424_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=111bp
MATLKTSTAFLLLITYLSGNVALAVGGSEYMGCYADGDARVLPYWENWDI
LQTTTGCVNHCRVRGYEYAGTEFSWQCFCGTSGNFASLAPAVSDDACNMA
CPGKPSENCGG Run BLAST on NCBI mRNA from alignment at Sc0000055:1091290..1092917- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97424_cuf2 ID=transcript:BL97424_cuf2|Name=transcript:BL97424_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1628bp|location=Sequence derived from alignment at Sc0000055:1091290..1092917- (Branchiostoma lanceolatum)
CCGAGCATCCTACATCATTCATTCCTTGAAAATATCTTGGTTATATCACC
GGATAGTTTCAAGTTACTCTTTCCTTGACTTTGTGGCACTTGGAACACGT
TCGTTTCATATTTGGATATTTTTCTCTTTCTAAATTACACATTTTACCAT
CCGATATGTAGTAACCATATCTTGTGAGTGAGCTATTTGGCAAAATATGC
CATGGCGACCTTGAAAACTAGTACTGCCTTTCTTCTATTGATTACGTACC
TGAGTGGAAACGTTGCGCTTGGTGAGTAGATTGGACAATTTTTCCATCAT
CATTTGGGTATTGTTGTCACTTTCTGTTCTAGCTTGCAACTTTTGTATTT
TGCCTGAACTTTTTAAATTCGACTGTAATTTTTCCGTTGTTGTAGCTGTA
GGAGGGTCAGAGTACATGGGATGTTATGCTGACGGCGACGCTCGTGTTCT
GCCGTATTGGGAAAATTGGGACATTCTTCAAACGACCACCGGGTGTGTGA
ACCACTGTAGGGTGAGGGGATACGAATATGCAGGTAAATTACCGTGTTTT
TGTATATCTTGAACTTGTACTAGCATTAAGAAAAGGGTGTATACCTTTCA
TTTTCCTCCTTGTTTCATCCTTGATGTATCCCTTGATGGGTTCAGCTATT
TGGAAAATAGTGTAATTGGATTAAAAAAAGCCTTGTTTGTTAATTTGTTT
CGGTGAACCACATTCAGGCGCAACAGACCACTTTTGTATAGTAAGCACAA
GCTGCGTAAGACCAGATTGTACCCCGTGTTATCATGGGTTTTGATTCATT
ACACCGGGATGGACCCCCACCCTTGTCTACCTTAAGGCTGGGTTTAGACA
CGCATTTCCAAGCACACTCCGAGCATACCCCGGGAGTACTCCGAGGGTAC
TTGGAAATGCGTATGTAAACGCAGCCTAAGTGTGGTGAGTTCGTTAACAT
GCTCGAGATATGGCTCTTTTTAAACATGGGACCGCCGGCTTTACGTTAGT
GCTGCATACCTAAATGTAACATCAGGTACAGGTACAGGTACCGGTACAGA
GGTTTAGGTACAGGTCCGGACCCGTGCCTATACCTGAACAATTTGAAAAA
TTAACATGTATTCTTCTGAACTTCTTCAATGATTTCAGCATCTTTATTCA
AAGAAAACAACTAGGTTTCCTACATCCAAACTCTCCTGGTCTTGCTTTCA
AAACTCCCGGCTGCCTGAATGATCTATTGCATATTAGTTACGCTGTTCCA
AGGTATCAATTTGGTCGCGTTTGGTGTTGCATGAGGTCTGGAGATCAGTC
ACAAAATAAGCACATGCTTGGTGTACAATTATATCGGTGCAGTAACGGTC
CTTCCTGATCCGGTATTTTGGACCTGTACCTAATCAGCAGTTTTTACGGT
ACAGTACCGGTAAATAGTACCGGTACACAGTACTACTTTACGTCCCATCC
GAGATTACGTCCCTAACTGAAGCTAGGTACTCATTTTCAACCTGACCCTC
CAGGGACTGAGTTCTCGTGGCAGTGTTTCTGTGGGACATCCGGGAACTTC
GCCAGTCTGGCACCCGCAGTTTCTGATGACGCATGTAACATGGCATGTCC
CGGGAAGCCCTCTGAGAACTGTGGCGGC Coding sequence (CDS) from alignment at Sc0000055:1091290..1092917- >transcript:BL97424_cuf2 ID=transcript:BL97424_cuf2|Name=transcript:BL97424_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000055:1091290..1092917- (Branchiostoma lanceolatum)
ATGGCGACCTTGAAAACTAGTACTGCCTTTCTTCTATTGATTACGTACCT
GAGTGGAAACGTTGCGCTTGCTGTAGGAGGGTCAGAGTACATGGGATGTT
ATGCTGACGGCGACGCTCGTGTTCTGCCGTATTGGGAAAATTGGGACATT
CTTCAAACGACCACCGGGTGTGTGAACCACTGTAGGGTGAGGGGATACGA
ATATGCAGGGACTGAGTTCTCGTGGCAGTGTTTCTGTGGGACATCCGGGA
ACTTCGCCAGTCTGGCACCCGCAGTTTCTGATGACGCATGTAACATGGCA
TGTCCCGGGAAGCCCTCTGAGAACTGTGGCGGCATGGCGACCTTGAAAAC
TAGTACTGCCTTTCTTCTATTGATTACGTACCTGAGTGGAAACGTTGCGC
TTGCTGTAGGAGGGTCAGAGTACATGGGATGTTATGCTGACGGCGACGCT
CGTGTTCTGCCGTATTGGGAAAATTGGGACATTCTTCAAACGACCACCGG
GTGTGTGAACCACTGTAGGGTGAGGGGATACGAATATGCAGGGACTGAGT
TCTCGTGGCAGTGTTTCTGTGGGACATCCGGGAACTTCGCCAGTCTGGCA
CCCGCAGTTTCTGATGACGCATGTAACATGGCATGTCCCGGGAAGCCCTC
TGAGAACTGTGGCGGCATGGCGACCTTGAAAACTAGTACTGCCTTTCTTC
TATTGATTACGTACCTGAGTGGAAACGTTGCGCTTGCTGTAGGAGGGTCA
GAGTACATGGGATGTTATGCTGACGGCGACGCTCGTGTTCTGCCGTATTG
GGAAAATTGGGACATTCTTCAAACGACCACCGGGTGTGTGAACCACTGTA
GGGTGAGGGGATACGAATATGCAGGGACTGAGTTCTCGTGGCAGTGTTTC
TGTGGGACATCCGGGAACTTCGCCAGTCTGGCACCCGCAGTTTCTGATGA
CGCATGTAACATGGCATGTCCCGGGAAGCCCTCTGAGAACTGTGGCGGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000055 | genome | Sc0000055:1091290..1092917 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97424_cuf2 |
| Biotype | protein_coding |
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