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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97423_cuf14 >transcript:BL97423_cuf14-protein ID=transcript:BL97423_cuf14-protein|Name=transcript:BL97423_cuf14|organism=Branchiostoma lanceolatum|type=polypeptide|length=115bp
MPSQLNDLGTGANDGDSDRAAYKPVILECSGDYLAIYDGSGAVSLGTNQE
FLFGDINANVTLDLRIRNMHSDDLLSTAPGGENFRIEVWVAERRDPLSNA
NTMVEVTKVGRAMYN Run BLAST on NCBI mRNA from alignment at Sc0000110:643042..650055- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97423_cuf14 ID=transcript:BL97423_cuf14|Name=transcript:BL97423_cuf14|organism=Branchiostoma lanceolatum|type=mRNA|length=7014bp|location=Sequence derived from alignment at Sc0000110:643042..650055- (Branchiostoma lanceolatum)
AGTGGATATAAACGAGTATCCGAGCATCAGAGAACAACATGAGTTGATGA
GGCTCATGCACAACATCAGACAATGTTGACTGTTAAATCCATTCAGCACA
AACTTAGAGTTTGCATATGGTCATGTTACGATCAAGGAGGTTATGATGGG
TTGGTAAAATTAGCTGTCCGGTCCGATCGGCGGAAACAGCGATCCGGTCC
GATTTCGGGGTGGAAACAGCCAGTTATGATACCTCCTTGGTTGCATGTGC
TGTCTACATTTGGGGAATAGTAGTAATAGGCATTGTTATTGTATTAAAGG
CAAAGCACATTTTTCAACATACTATGTACATATCTGGAACCCAACACAAG
CTTGAATGTTTGTCAGTAACATTAAGTTGTTACAATTTGGTGACATGATA
AGTAAATTCTTGTATCATCTTCACCCTAGATGAGGATGTGAAGATTGTAG
ATGCGGAACTTCCATCAGTGGTCCATGAGAACAGCTACCAGGACTACCGG
TACTGGGTCCAGGCCCTGCCCGAGTGGCTCACCCTCACTCAGGGCAGGTA
CAAGGTCGGCTTCTACCTGTCAGAGGACAACAACATCAACAGCACCACTG
ATAAAAAGGTAGGTCAAACAATAAGCTCATTCACACTTGTGAGTAAGCAT
GAGGCGCCATAGCAACTGTGGGTGACATGTCAAAGGTGAGGGCCTCTGAC
TGGGACACAGATCTCATCTCACAATTGTCTCAATTTGCATAACATTGTCC
AGGTGTTTTGTCTATGGTGGTCACCTGTCTACCGTAACCATTTTCTACCT
GTCCCTTGAGTTATCATTGTAGACAGGTGTGACAGTACTCTAAAATGTTA
CCTGTTGTACTGACAGGTGTTCGAAGTGCCAGGTGTGGCTGTTGAGAACG
TCTTTGCCCAGGGGAAAGGGCTGGACTTCCAGATCGCCCCCGGTACGCTG
TCTCAGCAGGACAGGGACCGGTACTGTGGGAGTACCTACCTGGGACTCAT
GCCTAGTCAGCTGAACGACCTAGGTAGGTTTACAGTTATCATCTAAAGTT
GCACTTAAGACATCCCCATGTTGTACTTAAGACATCACCATGTTGCACTT
AAGACATCCCCGTGTCATACTTAAGACATCCCCATGCCATACTAAAGACA
TCCCCATGTCATACTTAAGACATTTCCATGTTGTACTTAAGACATCACCA
TGTTGTTCTTAAGACATTCAAATATTGCTTTTTAGACATCATTATATTCT
TAAGATATAACACTATATTCTTAAGACACCTAATTGGAACATTTTCCCAA
GTCAACATCATGACCTTAAGATGTGTGCTGTTCGCAATTAATAATGTTTT
TCAATGTAACATCTAATGGTAAGTTGGGGTAGATTTTGTGTTACAATTAT
AACTGTTACATTCCTTCCTCTGATCTGACAATAATCCTATGAGAGAAAAC
CAGACTGTGTGTTTTTATAGCCAGGTTTTCTTGTTTTTTCAATGGCTTTT
TATTGGAATGATGGGATTTAATATAGGTACATTTAATATAGGTGTCATTT
GTACATGTGTGTCATGTCTGTCATTTGTACATGACTTGTGTGTCATGTAT
GTCATGAATCATATGTGTCATGTCTGTCATTTGTACATGTGACTTTTGTG
TATAATGTGTCATGTCTGTGATTTGTACATGTGTCAAGTGAGCAAGTCAG
TGTCATGTCTGTCCATCCATGATGTATGTTACATGTACCATAGACGACAT
ATGTGATCCTGGAGGCCAAGTCGGCGACACCTGCTATGCTCTCTTCAACG
AGCTGAAAACCTACCAGGAAGCAAAGCAGGCCTGCATGAACATGGGAGGG
GCACTGGCACTGGCAGACAAGGACACCATCCAGGATTTCACCAGCCAGCT
GAGTTCCTATCTGCAAAGCCGTTGGCTTCAGTGGGAGTACTGGATTGGGG
TTGACAACCTCAACGGCACCCTGGAGTTTGTCGAGTGGGAGTACACAACA
ACGGCAGTTGACGACGGCACCAATGACGGTTGGCACAACAGCGGTTGGGG
CCGTGACACCTCCGTCCAGCCCATGTGTGTGCGGCTGGTGCACTCGTGGC
ACACATACGTGTGGAAGGCATCAGACTGCACAGGCCGCTCTGCCTACATG
TGCCAGTTTGGTAAGGGCATGTGCCAGATTGGTGGCTTGAGGCAACAGCA
AAGACTGTATGCCTGGCATGCCCTGGCCACTTAATGTTTGTGGACAGGAA
GTTTGCAGTGAATGTGGATGGACTGCTGCATGGTGCCCTTGTTTTTTTTA
AAGATTGTTTCTGCTTCTGTTTAACAAGTGCTTTTCTCAATTGCAGTTGG
TGGCAGATAGAATACATTGATTCAGGTTGCAGATACGATACAATTTTGCA
GTGAAAGTGAATGGAGTGCTGCATGGTGCTTAAAAAATGTCATGATTTTT
TTCTGAATCGGACTCTGTCTTCAAAGCCTTTATGTTTGGAAATTCATTTC
TGGTGGCAGATGTGATATAAGTTAGGGACCTCTTGTCTGGTCATATTTCA
TCACTTCTGGATACTCCGAGTGATTGTTTTTACTTAATCCAAGCAATGGC
TTTTAGAATTCAGATTGATTAATGGTGTTGCATGGTCCTACATACATAAA
TATAGATTTGCTGCTTTTATCCAATTTTCTAAATTATACAAAAATCATTA
TTTTCCAGACACAGGACTTAAGGATAGTGAATTATGTGCACATATTGAAT
TAACCGTTAACAGATAAACTCCCCTAAACCTAAGAACACTATGAATACAT
TTCTGGAAAGCTGAAGTGCTGTTAATAACCCCTTCAAAACACTTAGATAG
CAGCACTATCATCTTTGTATAGTGCTAACCTTGAATAATAGTTTGCCTGA
AATGCTTTTAGTTTCAGAATATGTAATTGCAAGCACCTCAATTAATGATC
ATAACACTTATTAATGTAGCAAGAGGTGCCATCAAGTTGCTTGACATTAT
ATGAGTAATTGAAGATCCGCTTCTTTAGTAAAATGTGAAGGTAAGCCTAG
TACCCTGACATTTTACTGAAGAAGCCAATACTGCATGTAATGTCAGGGCC
AGAGGTTCAGCTGCATCCGGGTTACCTCTGCTTGGTTGTGAATTGATAGC
AGAAAAGGTTTAATTTCAGGCAGTGGAATTTAAGGTGTGCAGCTTGCAGT
CGACCTTTTCAAGGCAATTTGCTTCATGATCAATGCATGTAATATCTGTC
AAACAAAAGAAAAAGTTAGCTTTTAAGACAGCTTTAAAGACCTTCAACTT
GCCAATCTTTAGTAACATAATTTGCATTTATTCTTCAGGTACTGGTGCCA
ATGATGGAGATTCTGACAGAGCTGCGTACAAACCTGTTATCCTGGAGTGC
AGTGGTGGTGAGTGACACTTACTGTACCCATCTTTCAGACAACTATTCAT
CCACATTCCTGCATTTTTGCATTTTCATGCACACTGTTTTTGTATTTTAT
ATCAGTGTTCGAAATACCCACCTGCAGTCTGCAATTTGCAGAAAGATTTT
CAAGATTGCAAAAGAAAATTTAAACAACCTGCAATTTTGGGGAATGAAGA
AATCAGGCTTGGGATTCAATGGTTTTCAATTTTCAAATCAATCTAACTTA
TCTCTAAGGCTGCAGTTTATTTGCACCATAGCACGTAGACCATAACTAGA
TGTAAATTATGTAATCAAACTGTAGGGAGGTTGACATAAAGGAATTCATA
AACATTTGTGGTAGATTTCCCTGTAGTAAAAGAGTTCTGGGTATCTTTTA
GCTATAGTTTGTGGTTAGAACAATGTTTAAAACAATGGACGTCAGAGTAG
ATGTGAGAAACAATGGAAGTCAATTGAAACAAAAGTTTGTGGTGGGCTCA
TACAAAAACTTGAAAATATAGCAAATATCTACATATTGTATACATGTACA
ATGTCACGTGTGGCGATGTGCCAATGTCCCCTAAAATGCATCTACAGTAT
AGTAGTCTGTAGTACAAGAAATGGTCTAGGTCCATATAGATCACGTGCAC
GTCTTTGTTGATTAAAATTATCTTAAAAACGCTTTTCCCTCTTCAATATG
AAAGCCCAAGTAATATTTTCTACTGATTGTTATACGCAATCATAACGTTC
GTTTGGGCAAGTCAGGGCCTGGTTTGATTGCTTCAGTTACTGGTTACTCC
TTGATTTTTTTCTAGCAATGGCAAANTTCTAGCAATGGCTTGATTTAAAT
ACAGTCCTCCAATGTTTGCTCATTATCTCCATGAAAAATGGAGATATAGT
TTTGGGTGTGTCTGTCTGTGTGTGTGTCTGTCTGCGTGTGTATGTTTTTC
CGCACTACTGTAGTCAGCATGCATAACTCAAGAACCTCTTGATGGATTAC
GATGANCAAGAACCTCTTGATGGATTACAATGATAATTGGTATGTGGGCA
GGTGTTATGAAGCCAAAAGTCAACGTTGATTTTGGGCCCCCTGGTATGTG
ACCTTGGTACTGCAGCAGAACTTCCGTTTTTGTATCTTTTGACCATGACG
TGCTATGGTCTTGATTTTTAGGGGGCAGATAGCTTGTGATGTAATAAAGA
AGTGGTGTAGGTTTGGGCCCCCTTGCATATCAATAGATCAGATGGATCGA
TGGATCAGATAGATCGATAGATCAGATAGATCGATAGATCAGATAGATCG
ATAGATCAGATAGATCGATAGATCAGATAGATCGATAGATCGATAGATCG
ATAGATCAGATAGATCGAGAATGAATAGATAAATACTAAGTAAATAAAGA
AGGCCGTAGTATGGAGGCTTGTGTATTTTGCAGAAATTATTTTCAAATTG
CAGAACAAGATTTTGACATTCTGCGATATTGCAGAACACTGGAAAAAAGT
ATTTCTGTCACTGTATGTAGTACATAGTGTTATAACATGGACACTCTTTT
TGTGTTGAGACATTACAATATCAGACGGGATAGAAAAAGACATTAAGTGA
TATCAGAGATGAATTACCACGCAGTGCAGTCGAATGAAATCAAATCATTG
ACATTATCTTTCAGCACCATCTCAGAGACTGAATTCCCCTCGGAATGCAA
TTATCATAAATTGACTATGATATAATCGTGGTAATTTTACCATCAAAGAT
GAGCTTTCTAGCTAATAATAGGATCATGTCAGCTTTAGGGATCATCATTT
TGGTACAGTATGACAGAATTTCAGAACTGTTGACAGATAACTTTGTTCAA
TCGTGATCTCTATGCAATGGACGGCTGATTTATGCAACGTCTGGGATGTG
GGCATAGCTTTGAGTCCATATTTTAATCCAGTTTAGTTTTTAATTTGTCG
GCTCTCTGATCTTACAGAATAATTTACAGCACACTTATTCATTTAAACTT
GTGGGGACTTGATTTTGAAGTGGGGGGGGAGGAGATGTTCTTGCCGCGAG
TGAACCATCACCGCTAACATAAAACTCCTGGGAGAATTTCACATTCAACA
ATAAGAATCCTTGGGAAAAGAAGTAGTACTTACTCACTGAGTGTAAGTAA
AATTCTTGAAGAAGGTTAAATTTCATTTACTTTAAATGTTAATCAAACAG
GTGGTTTTATTTCATGTTAGGAGGGGGGGCAAGGTTTTATTAGTAGTAGT
AGTCCACCGTATGAGGTTTTACTGATGTTTTTCAGTGGTGTTTCGAATCT
ACAGTTAACATAGAATATGTAACAATTCTGTAATACAGTCTAGGTAATAC
ATAAGATATGCATATTGGCAGTGTCATGAGTTTTCTGGTTGAGAGGTCAA
TGTTTGAAGATTTACGGTAAACTTTGTCCATCCAGATTACTTGGCCATCT
ATGATGGGTCCGGGGCGGTCAGCCTGGGAACCAACCAGGAGTTTCTGTTT
GGAGACATCAATGCCAACGTCACGCTGGACCTGCGGATCAGGAACATGCA
CTCCGACGACCTCCTCTCCACCGCGCCCGGCGGCGAGAACTTCAGGATTG
AAGTCTGGGTGGCGGAGAGACGTGACCCGCTGTCAAATGCCAACACAATG
GTAGAAGTTACCAAGGTTGGTCGAGCAATGTACAATTAACTGTTTTACTC
ACAGCTGTTGAAACTGTACATCACAAATGTTAAATCCTAAGCTAACCTTC
ATTAGCATTAATATGCGGGGTTACAAAAATCGACCACTTCGAAAAAAAGT
TGGTTTGAGAGATCTCTAGTGTAGCAACCTCCAGGTATGCACAGTTTAGT
GCAATACTAAGTATACTGGGGGATGTTGAGTTGGAGATCTGTTTGGACGT
ATCTTTTCAGGGTGGCAGAATTATGTACCCGGATGGAATTGTATATGCCA
CATGAGTCTGTACGATTTGTTGGCTTCCACCACTTTCTCAGAACGTATTA
AGGAAAAACTCAGGCTAGTCAGGCTCAGTCATGATTATACAAAATGTGAC
CTGAATTGACATGTTTTCAATTAAATGTTTTGATGAGAACTTGAGAACGA
CGCCTTCAGTTGCAACATTCAAAAATATGTTGCTACGAGTAACTATGGAC
TGACTACGATCACCGTATAGTGAAATCATGTTATATCATCGACTTATCCT
TATGTGCTGAATATGATTATGGAATACTGATTGTAATGTTATTTTTGTAA
AATTGCTTTGTTATATTTTCCGATGGTACATTAAAAGGACCCCTGACCTC
CTCCCTTGAACTCTTGAAAAACCGGCCTTGGCCGAAGAGTGTATATTGTA
TACTTTAAAGGTTAGATAGAGGTTGAAAAAAAATGTTTTGAATGTTAGAG
AAAGGTAAGGGAGAGCATTGATGTTAGATTTAGAAGTACATGAAGTAATC
CTTGCTGACATTAGTTTCGTGTTAATTGGCAATTAGCCACAGAATGTCAC
GTTGCATCTTCACTACTACATGTACGTGTTAGTGTCCATTGTAATTAGCT
GTTTATAAATTAGACTTCAAACTAGATTCATGTATCTCATGAAAAAGATG
CACAACTTTACTGT Coding sequence (CDS) from alignment at Sc0000110:643042..650055- >transcript:BL97423_cuf14 ID=transcript:BL97423_cuf14|Name=transcript:BL97423_cuf14|organism=Branchiostoma lanceolatum|type=CDS|length=1044bp|location=Sequence derived from alignment at Sc0000110:643042..650055- (Branchiostoma lanceolatum)
ATGCCTAGTCAGCTGAACGACCTAGGTACTGGTGCCAATGATGGAGATTC
TGACAGAGCTGCGTACAAACCTGTTATCCTGGAGTGCAGTGGTGATTACT
TGGCCATCTATGATGGGTCCGGGGCGGTCAGCCTGGGAACCAACCAGGAG
TTTCTGTTTGGAGACATCAATGCCAACGTCACGCTGGACCTGCGGATCAG
GAACATGCACTCCGACGACCTCCTCTCCACCGCGCCCGGCGGCGAGAACT
TCAGGATTGAAGTCTGGGTGGCGGAGAGACGTGACCCGCTGTCAAATGCC
AACACAATGGTAGAAGTTACCAAGGTTGGTCGAGCAATGTACAATTAAAT
GCCTAGTCAGCTGAACGACCTAGGTACTGGTGCCAATGATGGAGATTCTG
ACAGAGCTGCGTACAAACCTGTTATCCTGGAGTGCAGTGGTGATTACTTG
GCCATCTATGATGGGTCCGGGGCGGTCAGCCTGGGAACCAACCAGGAGTT
TCTGTTTGGAGACATCAATGCCAACGTCACGCTGGACCTGCGGATCAGGA
ACATGCACTCCGACGACCTCCTCTCCACCGCGCCCGGCGGCGAGAACTTC
AGGATTGAAGTCTGGGTGGCGGAGAGACGTGACCCGCTGTCAAATGCCAA
CACAATGGTAGAAGTTACCAAGGTTGGTCGAGCAATGTACAATTAAATGC
CTAGTCAGCTGAACGACCTAGGTACTGGTGCCAATGATGGAGATTCTGAC
AGAGCTGCGTACAAACCTGTTATCCTGGAGTGCAGTGGTGATTACTTGGC
CATCTATGATGGGTCCGGGGCGGTCAGCCTGGGAACCAACCAGGAGTTTC
TGTTTGGAGACATCAATGCCAACGTCACGCTGGACCTGCGGATCAGGAAC
ATGCACTCCGACGACCTCCTCTCCACCGCGCCCGGCGGCGAGAACTTCAG
GATTGAAGTCTGGGTGGCGGAGAGACGTGACCCGCTGTCAAATGCCAACA
CAATGGTAGAAGTTACCAAGGTTGGTCGAGCAATGTACAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000110 | genome | Sc0000110:643042..650055 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97423_cuf14 |
| Biotype | protein_coding |
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