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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97407_cuf5 >transcript:BL97407_cuf5-protein ID=transcript:BL97407_cuf5-protein|Name=transcript:BL97407_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=130bp
MAGQEWHRMLARTLYIGLILYALVAACDCGYVRNEEDTPATLYQDNATTE
SSTTVVPASLTPSNTTKDETYLGFIAAAVSVVFFGSNLVPIKKVDTGDGM
FFQWVFCSAIWCVGLVVNVIQGYPKFYPIS Run BLAST on NCBI mRNA from alignment at Sc0000018:3794660..3796331+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97407_cuf5 ID=transcript:BL97407_cuf5|Name=transcript:BL97407_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1672bp|location=Sequence derived from alignment at Sc0000018:3794660..3796331+ (Branchiostoma lanceolatum)
CCAGAAATGCAGTCATCCTGGTAGCAGTGTTTGCTGTGACAATTACCGGG
GCTCTGCTGACAAGTTTCTCGTTTTAATATAGCGACTGATAAACAGTGGA
TCAAAAATACCTAAGCTCTTTTCCTCACGAAAGCCTATCTATACCTATAA
GTCAATTTACTGACAAATGTAACCAACCGTTGATAAAATTCTACAAGTGT
CCATGCATCTGAGTTATCATGTATAGTTAGGGCATGTCATATCACCAACC
ATGTATGTGTGTGTCCACGTTTGGGACATAGCTTGGGCCATGAAGAACAT
TGTAAGTGTGAGTGCGGATAGTAGCCAAACAGCACGATCTTTGTTGTCCT
TGCAATGTACACAAAGAGAGGTCAGCGCGGTTTGTGCCCTTTGGTGGGAA
TCAACTCTCGCCCACGTTTAATGATTAAAGATGGCCGGACAAGAGTGGCA
TCGAATGTTGGCTCGTACTCTCTATATCGGGCTGATTCTTTACGCCTTAG
TTGCGGCCTGTGACTGTGGATACGGTGAGTTCATCTTTCTTACATGTCAC
ACGTTTGGGCTAGAAATTTCGTTAGGCCCGCAGAGTGACGACAAAACACT
GTTTTATCGTAAAGTTGGACAGGTGCACTTTGGCCCCTCACAAGACAAGT
CAACAAGCGGCTGTTCTAGTGGGGGGGGGGGTATACAGTACGAGCAAAAT
GATACTTTCGGAGACCTTGATCTAGGACGAAAATCTCTCTCTCTTTATGT
ATATATATATATGAACATCCTTTTGCATTATCGCCGATTGTATACACTTG
TGTAAACGTGTCGTTACTATTGATAGCCTTTCTGCTGATATTCTAGACTT
CAAAATAAAACAAACAATTGAGACGATGTCAAATTCCCACGACCTCTAAA
GAACTGATACAAGTTATGGCTCGAGTCAAGACTTGGGACACGAGATTGCA
AGCCACGTTTCACTCCGATGATCTAAAGTTAATGTATGGTTTATCATCTG
TAGGGGAACAACAAAACGTTCATCCGGCAGGTGTACGGTTACGCATGTAG
CCGGTGAAATTGTTAAAAGTATTTGTCAACTTGAGAAGTTTTCTTCCTTC
AAACTTGGTCATCAAATGCATAGTCTTTGATCACTCTTCAGTCCGAAACG
AAGAGGATACACCGGCGACGCTGTATCAGGACAACGCAACAACCGAGTCA
TCAACGACAGTCGTCCCGGCATCTCTAACCCCGAGTAACACCACCAAAGA
TGAGACCTATCTGGGGTTCATAGCGGCAGCTGTGTCCGTTGTGTTCTTTG
GAAGCAACCTCGTACCTATCAAGAAAGTGGACACGGGCGATGGTAGGCTG
CTTCAGAGACTTATCAACCTTTGAATGATGACTTTCAGCAACAACAACAC
ACAACATTACTGATTTAGTGTTAATATCCTACATGGATACAACATATACA
TAGTAATTCAGTTGACAGATCATTCAGCTTGTACTTGTACTGCAACTTGA
CAGCAATGTTAAAGAATCTTGAATGATCGAATGATTCTAAGCGTAATGAT
GATTAATGATGATGTCTACTGTTACAGGCATGTTCTTCCAGTGGGTGTTC
TGCTCGGCCATCTGGTGTGTAGGTCTGGTGGTGAACGTTATCCAGGGTTA
CCCCAAGTTTTATCCCATTTCT Coding sequence (CDS) from alignment at Sc0000018:3794660..3796331+ >transcript:BL97407_cuf5 ID=transcript:BL97407_cuf5|Name=transcript:BL97407_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=1170bp|location=Sequence derived from alignment at Sc0000018:3794660..3796331+ (Branchiostoma lanceolatum)
ATGGCCGGACAAGAGTGGCATCGAATGTTGGCTCGTACTCTCTATATCGG
GCTGATTCTTTACGCCTTAGTTGCGGCCTGTGACTGTGGATACGTCCGAA
ACGAAGAGGATACACCGGCGACGCTGTATCAGGACAACGCAACAACCGAG
TCATCAACGACAGTCGTCCCGGCATCTCTAACCCCGAGTAACACCACCAA
AGATGAGACCTATCTGGGGTTCATAGCGGCAGCTGTGTCCGTTGTGTTCT
TTGGAAGCAACCTCGTACCTATCAAGAAAGTGGACACGGGCGATGGCATG
TTCTTCCAGTGGGTGTTCTGCTCGGCCATCTGGTGTGTAGGTCTGGTGGT
GAACGTTATCCAGGGTTACCCCAAGTTTTATCCCATTTCTATGGCCGGAC
AAGAGTGGCATCGAATGTTGGCTCGTACTCTCTATATCGGGCTGATTCTT
TACGCCTTAGTTGCGGCCTGTGACTGTGGATACGTCCGAAACGAAGAGGA
TACACCGGCGACGCTGTATCAGGACAACGCAACAACCGAGTCATCAACGA
CAGTCGTCCCGGCATCTCTAACCCCGAGTAACACCACCAAAGATGAGACC
TATCTGGGGTTCATAGCGGCAGCTGTGTCCGTTGTGTTCTTTGGAAGCAA
CCTCGTACCTATCAAGAAAGTGGACACGGGCGATGGCATGTTCTTCCAGT
GGGTGTTCTGCTCGGCCATCTGGTGTGTAGGTCTGGTGGTGAACGTTATC
CAGGGTTACCCCAAGTTTTATCCCATTTCTATGGCCGGACAAGAGTGGCA
TCGAATGTTGGCTCGTACTCTCTATATCGGGCTGATTCTTTACGCCTTAG
TTGCGGCCTGTGACTGTGGATACGTCCGAAACGAAGAGGATACACCGGCG
ACGCTGTATCAGGACAACGCAACAACCGAGTCATCAACGACAGTCGTCCC
GGCATCTCTAACCCCGAGTAACACCACCAAAGATGAGACCTATCTGGGGT
TCATAGCGGCAGCTGTGTCCGTTGTGTTCTTTGGAAGCAACCTCGTACCT
ATCAAGAAAGTGGACACGGGCGATGGCATGTTCTTCCAGTGGGTGTTCTG
CTCGGCCATCTGGTGTGTAGGTCTGGTGGTGAACGTTATCCAGGGTTACC
CCAAGTTTTATCCCATTTCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:3794660..3796331 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97407_cuf5 |
| Biotype | protein_coding |
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