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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97405_cuf3 >transcript:BL97405_cuf3-protein ID=transcript:BL97405_cuf3-protein|Name=transcript:BL97405_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=138bp
AKSHYQAELACEADGGHLVNIKTESLHNFILDMVREVNPYRDQDYWIGLN
DKRTYNVWTWSDGIPLSGCGFSKWAPGEPNDGAGTGQDCGQLWAAVGLRW
DDDFCSIRKRFICQIGPGENDACSGDGCRVANGGCAQI Run BLAST on NCBI mRNA from alignment at Sc0000018:2246280..2248717- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97405_cuf3 ID=transcript:BL97405_cuf3|Name=transcript:BL97405_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2438bp|location=Sequence derived from alignment at Sc0000018:2246280..2248717- (Branchiostoma lanceolatum)
AGCCAAGTCCCACTACCAGGCGGAGCTGGCGTGCGAAGCAGACGGTGGAC
ATCTCGTGAACATCAAGACAGAATCTCTTCACAACTTCATCCTCGACATG
GTTCGGGAAGTCAATCCGTATCGTGATCAAGACTACTGGATCGGATTGAA
TGACAAGAGGGTAAGTTACGAAAAACAACCTGGCACTTTATGCATGAACA
CTATATTCTTTCAGCACACGAAAATCCAGACTAGCCGCGAAAGTCACCCG
ATGCCTTTGACCTTCTTTATTATCCTGGTATTTTAGCAAGGGGTTAAAGG
TCACTGGAAGTTGGTACCGTCCTCTGTTGTAGTTGAGTGTATGTTGCTAT
ACTTCCATCTACTAATGTATACATGAATGTCAGGAACATTTTTGTGATAT
TTGGTCTAATTTCCAGAGTTTGGTCACCACTTTTTTTCTATTATTTTCCG
GTTTCTAGACGTACAACGTGTGGACGTGGTCTGATGGAATTCCGCTGAGC
GGTTGTGGGTTCAGTAAGTGGGCTCCCGGAGAACCGAACGACGGGGCCGG
CACGGGTCAGGACTGCGGGCAGCTCTGGGCAGCTGTCGGGCTCAGATGGG
ACGACGACTTCTGTTCCATTCGCAAGAGATTCATCTGCCAAATAGGTGAT
CTGTAATCTCCAAGCAGAGGTTTCGATCGGGGGGCTAGTAGTGGCCGGGA
TTTTTAACGCTGCCCTCAGCCACCCTCCTTTATCAGCGCTGAAACCCACT
CGGAAAATGTTCGGCAAACTCTCCCGGTCTCAGCCCTGATCTTTTGAACG
GAGATTTTGGCTTCAGTAGGGGCGTCACTGACAGTTACTCATAACTGATT
AATGAGCTAGCCTTATTCGGCACAAACAGTTGTTGGTTGCTCATGAATGA
TTAAGTAGCGATGTAAGACGTAATCTGATTGGTTGATAGCTTACCAGCGT
CCTTTGCGGCTTTGCTCAAAATGAGCATTAGCAAACCCTCTGATTGGCTG
AAAGCTGTTTGGTGGCGACGTCGCCAGAAGCGTGTTCAGGGGCTCGGAAG
GCAGGGCCGCTATGGAAGGTAACGAACATATCGGGTCTGCTGGGAGGATG
CCCTCAGCGACAGAAATGATAGCCCCGCCCTGATGCGTTCTGTCGAAGAG
GTGAAGGGAGAGCAACGTTAAAAATCCCGGCCACTACTAGCCCCTCCTCC
CCCATCGAAACCTCTGCTTGGGGAATAGGTAATCTGGCGTTTTGGGCGAC
GCCTCAGGGGCGAGCCTAGTAGTATATATATTGTGTGCAGTTTACAAGAA
TTCTAGGAATTGCACAGGAATGTGAAAGTCTACGGGACGATAACCCAAGA
ATGCTTCAATGGATTGCCTTCATATTTGGTAGGTGGGTAGGTCTTTATGA
GACCTTGAAATGATTATATTTTGGGCCTCTTAGCAACACTTTATGACACT
GCAGAGGAAATATGAGGAAACGGTACAATATCCTTTTTTGTGAAGACAAT
ACTTTCAATCATTGGACAACTTGTGTCATTTGGGTAGAGAGAGTGAAAAA
TTGATATGATTTACGCAAGTGAGGTCCTTATTTGCACGTGGGCTAAAAAA
ATATTAACAGGGGCCACCGTTGCCATGGCAACGTCTTTTTATGTTGCCAA
TATTGTTTATACGAATGTTGATGTAAATTTGTTGAACGTCTAGTAGATCG
TATCTGAATTCTATTTATTTTTGTGTCGTCAGGTCCAGGTGAAAATGACG
CGTGCTCTGGAGGTAACAAAAGTTTATTACAAATACATGACCGAGGGCTA
ATTGCAAGTACAAACAGCAAATATGATAATGATAAATACAACGATATTGA
GGGATACATCCGATATCATGCTACATTCTAGAATCTACATGGTACCAGTT
TTCTTGGGGTTGACTTTTGAGGCAGTGGAAGTCGAATTTACCCACTTCGT
TTGTCATTTTTTGGTTCTTTGATTTTAGTAACAGAGTTGTGATGTCACCA
GTATATTTTTTTCCCTTTAACTGGGCATTGTTGGCAAAGTACGCTTAGAA
ACGCCTCTTTTAAGAAACATCTTCCATATCTATCTGACAACCAAGCATCT
AACATGAAGCAAAATGCAGAGAACAATACATTGATATGTTGATAGAGGTT
AGACATCCAGGTAATAAGATACGCCAAAGAACAGTTACTCAAGCAACTAG
ATAACATTTTGAAACAGTCAGACGCTTTAGACAGCATCCACTGTCTCTCC
TCATCAGTGACTAATGGCAGTTGCAGTTCTTTCCACTAGTCACTGACGAT
AGCGGGTGTTTAAAATGTTATCAAGTTGCGTGAGTAACTGTTTTAGAAAT
ACCCTAACATGTCACATATACATGTATTCTATGATTTCGGTTTACTTCAG
ACGGGTGTCGCGTTGCAAATGGTGGCTGTGCTCAGATC Coding sequence (CDS) from alignment at Sc0000018:2246280..2248717- >transcript:BL97405_cuf3 ID=transcript:BL97405_cuf3|Name=transcript:BL97405_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1656bp|location=Sequence derived from alignment at Sc0000018:2246280..2248717- (Branchiostoma lanceolatum)
GCCAAGTCCCACTACCAGGCGGAGCTGGCGTGCGAAGCAGACGGTGGACA
TCTCGTGAACATCAAGACAGAATCTCTTCACAACTTCATCCTCGACATGG
TTCGGGAAGTCAATCCGTATCGTGATCAAGACTACTGGATCGGATTGAAT
GACAAGAGGACGTACAACGTGTGGACGTGGTCTGATGGAATTCCGCTGAG
CGGTTGTGGGTTCAGTAAGTGGGCTCCCGGAGAACCGAACGACGGGGCCG
GCACGGGTCAGGACTGCGGGCAGCTCTGGGCAGCTGTCGGGCTCAGATGG
GACGACGACTTCTGTTCCATTCGCAAGAGATTCATCTGCCAAATAGGTCC
AGGTGAAAATGACGCGTGCTCTGGAGACGGGTGTCGCGTTGCAAATGGTG
GCTGTGCTCAGATCGCCAAGTCCCACTACCAGGCGGAGCTGGCGTGCGAA
GCAGACGGTGGACATCTCGTGAACATCAAGACAGAATCTCTTCACAACTT
CATCCTCGACATGGTTCGGGAAGTCAATCCGTATCGTGATCAAGACTACT
GGATCGGATTGAATGACAAGAGGACGTACAACGTGTGGACGTGGTCTGAT
GGAATTCCGCTGAGCGGTTGTGGGTTCAGTAAGTGGGCTCCCGGAGAACC
GAACGACGGGGCCGGCACGGGTCAGGACTGCGGGCAGCTCTGGGCAGCTG
TCGGGCTCAGATGGGACGACGACTTCTGTTCCATTCGCAAGAGATTCATC
TGCCAAATAGGTCCAGGTGAAAATGACGCGTGCTCTGGAGACGGGTGTCG
CGTTGCAAATGGTGGCTGTGCTCAGATCGCCAAGTCCCACTACCAGGCGG
AGCTGGCGTGCGAAGCAGACGGTGGACATCTCGTGAACATCAAGACAGAA
TCTCTTCACAACTTCATCCTCGACATGGTTCGGGAAGTCAATCCGTATCG
TGATCAAGACTACTGGATCGGATTGAATGACAAGAGGACGTACAACGTGT
GGACGTGGTCTGATGGAATTCCGCTGAGCGGTTGTGGGTTCAGTAAGTGG
GCTCCCGGAGAACCGAACGACGGGGCCGGCACGGGTCAGGACTGCGGGCA
GCTCTGGGCAGCTGTCGGGCTCAGATGGGACGACGACTTCTGTTCCATTC
GCAAGAGATTCATCTGCCAAATAGGTCCAGGTGAAAATGACGCGTGCTCT
GGAGACGGGTGTCGCGTTGCAAATGGTGGCTGTGCTCAGATCGCCAAGTC
CCACTACCAGGCGGAGCTGGCGTGCGAAGCAGACGGTGGACATCTCGTGA
ACATCAAGACAGAATCTCTTCACAACTTCATCCTCGACATGGTTCGGGAA
GTCAATCCGTATCGTGATCAAGACTACTGGATCGGATTGAATGACAAGAG
GACGTACAACGTGTGGACGTGGTCTGATGGAATTCCGCTGAGCGGTTGTG
GGTTCAGTAAGTGGGCTCCCGGAGAACCGAACGACGGGGCCGGCACGGGT
CAGGACTGCGGGCAGCTCTGGGCAGCTGTCGGGCTCAGATGGGACGACGA
CTTCTGTTCCATTCGCAAGAGATTCATCTGCCAAATAGGTCCAGGTGAAA
ATGACGCGTGCTCTGGAGACGGGTGTCGCGTTGCAAATGGTGGCTGTGCT
CAGATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:2246280..2248717 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97405_cuf3 |
| Biotype | protein_coding |
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