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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97401_cuf25 >transcript:BL97401_cuf25-protein ID=transcript:BL97401_cuf25-protein|Name=transcript:BL97401_cuf25|organism=Branchiostoma lanceolatum|type=polypeptide|length=133bp
REHTWGVTMRFYVVCLTLLLGVLTVNSVPGVHNANRVRRYLSEDELLREL
SALDEALKDGLENDKRDEELEGRSKSGSDGSGGKSGSGGKSGSGGKSGHG
KDHGSHGSHGSHGSHGGHGSHGKDHSGHGSHGK Run BLAST on NCBI mRNA from alignment at Sc0000260:163856..171162- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97401_cuf25 ID=transcript:BL97401_cuf25|Name=transcript:BL97401_cuf25|organism=Branchiostoma lanceolatum|type=mRNA|length=7307bp|location=Sequence derived from alignment at Sc0000260:163856..171162- (Branchiostoma lanceolatum)
CGGGAACACACTTGGGGCGTCACCATGAGGTTCTACGTCGTGTGTCTGAC
TCTACTGCTGGGGGTGCTGACCGTCAACTCAGTCCCAGGTAAGAAATACT
TCGCTCAAGTTCGCTCAAGTTCATCTAAAAGATGATAGATGATATTTCTT
GGTCCGTGTGGACATACCCGTAGTGGAAATAGAGGCGTAGGGGCTAGGTC
CGATTCGTCTCACGATCGAAAACTAATGGCACTTTTGGTATAGTCGTGCA
TGTCTCCTGCACAACTTAGCTACCTTGTGACGAAAAATGCTGTCTTTGAT
CATTGTTGGGGCTGCATCCGTCACAGCCAGCTTGAACTTGACCCCTACGA
AATCCAAAGCTTGTGTGTTACGCCGAATGGCGGTTCTACCGGCTATGTAG
ATACAGATGTGTCAAAATCTTACGACGGCCTTCGACAAATGTGACCGAGG
ATAACGGAAGAAATACTATAATTCGCGATAGTTTCTTAGGTTTATTTCCG
ACCAAATACGAGTTTTTGTCGTCCTTAGATTGGACAGATGTACTGTAAAA
ACAAGGATTTGATTCTTCTTTATCTTAGATTGTGTCATGTTAGCTTACTT
GCAGTGTTGAACCCGAAACAAACATATTTTGATTTGTTAGTAAAAATAAA
AGTATTTTCGTGTCAGCGCTTTAAAAAAAATACTCTTCAAGCAGAGTTTT
GNCAGTAAACCGTCCCATGGCGCAGTGGCAGGGTGTTTGGCCCCAGAACC
CAGAGGTACTGAGTTCGAATCCGGGGTTCCCTGATTGTCCCGTTGACGTT
GTGCCCTTAGGAGAGGCACTTTTCCTTACTTCACTCACTTGTATATGAGT
ACCTAGCTTCGGTTAGGGACGTCCTTCGGATAGGACGTTAAATGGAGGAC
CCGTGTTTGAGGAGAGCCACACCTCGAGCACGTTAAAGAACCCGCACGTT
AAAGAACATCGCACTTATCGAAAAGAGTAGGGGTCCTTCCCGGTGGGAGT
GGTTCAAAACTTACAGTCCTATGGTCGCACATGGGTTAATTGTCGTATTG
AGGTCACCTGCGCGCCGAATGGCAGTCGCTACAGACCCTTGCGATCTAGC
ACCGCCAAATGTGCGCTCCTCGCAATTCAGCTTCTGGCTGCGAAGAGAGA
GAGTAGTTGGCCCACCCAGTAACAAATGACATAACTCACCAGGTTTGTAC
TGAAGAGTACAAGCTGTGTATACGGACAGATTTATTTGATCCACTCATAC
CGAAAAGTACCACTACTATTTTCGATAAGTCTGGTGGGTGGGATATTGAG
TTTGACCCTGTTTGTCGACCTCTGACATGTGAAAGTAAATACTGGAAATG
TTAAGATTGTCTGAGAGAGTTAGCAAAGTTCTTGATTAGGTCAAGACGTT
CTTGACTATAGAAAAGGTAGGTCGGTTCTGTCTAGCCTCTACAAGGCTCC
ACAGGTCGCTGGAAAAATAGTAGAAATTTGCCAAATATACAGATAACATG
CCCGAGGAGTTAGTTGTCCAGGGAGTACAGTTTGCGACCTGGTCAGCTAA
CTCCTCTGGCATGTTATCTGTCTATTTGGCAAATTTCTACTTATTTTTCC
AGCTACCTGTGGAGCCTGGTAGAGGATAGGTTCTGTCGAAGACTCGCTAC
AACTACTACAGTAACTATTCTAAGTTGACTTTGATCAGCTGTCCACCAGG
AGAGATTAACTGATTTTATCCCCTGTGTCGTATCTTGATATCATGAGGTA
GATATAAAGGTAGTCCCATAGCCATTTTGAGGCCGTAGGGGCAGTAGTTA
GTTATCTACTGTGTCAAGGGACTGTATTGGAAGGTGGAGCACAACCCTCT
AATCCCACCACCTTTTACCGCCCAAACCGAAGTCAGGTACCCGTTTATAT
ACCTGGATGGAGTGAGGAAAGTCGTGTTAAGATCGTTAAAGTCGTGCTAT
TGATGTCTGTAAGGATCAAACAATAGTGCTCACGGTCAGAAAATCGATTT
GGCTCATATTTTGCACAGAGATAGTACTTGGCCAAAAACAAGTTTTTGGG
CCATTTTGACAGATTTTTGTACGGTGACAACATGGAAATTGGCAAAGTTT
AGAGCAGACTCACTGCCAAATTCTATAACGTAGCGGAAAACACAAAAGGG
CAGTTTTAGACCGATGCTTAAACTTTTAGAAAAATGGTGTGAAGTTGATT
TAAATGAATATTTGAGTACTTGGCCATCCTCAAAACAATACGATGTTTTA
AGGCTACAAAAAACTTAGATTTTTGCCTAACTTTGAGACGTTATAAGTAT
AATATCAACGCAGATATGAGGGACCAAGCCTAAGCTCTGTCTTTTTTTGA
ATAAGTTTACATTGATTTGGCAATATTCCGACGAAAATGCAAGAATGGTT
GTTTACATTTCAAGCTGAAATTATAAAATGGTCGAGGAAAGAAATTAAAG
AGAATGAACTGCTCAGTTAAATTTAATTCGACGTGTAAAATATCATTTAT
ACGTTGATTTTGGTAATCTAATAAATTGCGTATTGTGAAATTTTCGTCAA
ATTTGTGCATCAGTAGATATGTTTTCGGCTCGGATAAATTGCAATCATTA
CGCACATTTAGGTCCGGTTTGTTTTTTTGCTAGCTTGTTTGTTTGTTGGT
CTGTTTGTTTGTTGGTTGGTTAGTTGATTCATTGTTGGTTCGTTTTTTGA
TTGGTGGGTCAATTACAAACATGCATGGTGGTATTTTGTGGGTTTTAATC
GTTACTTCGCGTTGTGAAGTGATTTACATACTATGCTCGATTTTATATGT
ATTGTGTGCTGAACGAAACACAGAACACATAATTCTTATGTGTGTACTTC
TCACGCTCATTCCGTTCCATCGCCTGACTTCACTAGTCTCTACCAGACTA
ACCGCGCCGGCTATAGGGAGAACATTTGCCGGGGGACTTTGGCCATGTAG
GGTTTCATTCGCAGCCGCTAGGGTTGCATTATTGGACCCTATCTCCATAG
CCGACTCCCTTCATACAGTTGACTCTATTTGGCCAATTTTTACTATTTTC
CCAGCGACCCGCGGAGGCTGGTAGAGCCTATGACTTTACGAGCTTAGTAA
CGCATAGATACTTTGCAGACAACTAAACGTACCTGCTCATGTGCAAGGGG
TGTTAATAATCTACTTAAGGCGACGCCCACTTAAGCACTCCCTTCATAGG
TCATCATAGTGCAGACTCGATACTGTACATCTTGAAATATTTGCGGTGGT
TTGATTTGTATTTTTTCGGTGATCTCTCTTCTAAAAATTCATGACACCAA
GATTAGCGTGTCCATCGTATCATTATTGTATTCTGTATTATAGTATCCCA
ATCGTAAACTTAACACGCCACAACAATCTCCCTTTAAAGGTAGTGTGCGT
AGTCCAGTGGTTAGCGATCTTGCCTCTGGAACTAGAAGCCCCGGGCTCGA
TCCCGGCTGTGTCGCTCACCCGACATGCACGCTACCGGTAAGAGTCGCAG
TCCTTAGGACGGGACGTTAGGCCGTGGTCCACTGTTCATTGTACTTGTCG
AAAAGAGCTAGGGGAATTTCCCCGGTACAATGAACCTGTGAATACTGTAC
ATAGCGTCTGTTTTCTCTGTCACGTGGAATATTAGCTCATCTGTTCCTTG
AGTTCATTTGAGCCAAACTGGTTCGAGATGACTTTCCTTTCCTTTCCTTG
CCCTCCTACCTCGAAATACAGTCCCGTGAAACATAGTGGCTGTACGGTAA
AATTCAGGGCTGTCGTTCTCCAGATGGTGAATTATCATACAGTAACTATA
TACAAGTTTCATGTTTAAAGCTTGTTACGGTGTTATTGTGGTTAGGCTTA
TTATCTCCATGAAAAATGGAGATATTGTTTTTAGCGTGTCTGTGCGTGCG
TGCGTGTGTGTGTCTGTCTGTCTGTCTGCGCGTTTGTGTTTCTAGACTAT
TGTAGTCTGCATAACTCAAGAACCTCAATTATGATATTCATTACAATGAT
ATTTGGTATGTGGGTAGGTGTTGTGGAGACAAAGGTCTAGGTTGATTTTG
GGCCCCGTGGTATGTGATCTTGATACTGCAAGACCTGGACGAGCTTTTGA
CCTGGACGAGCTATGGTCTTTTTTGGTGGCAGATAGCTTGTGATGTAAGG
AAGAAGTGGTGTAGATTTGGGCCCCTTTGTTGACTTTGAGTTAAAAGCTG
GTGGGTTCGAATGCCTGACACCTATTTCATGATGCCACTCACATGAACAC
ATCTACATCTATCTTGGTGTTATTGCTATTTCCTCACTAGACGCAGGTGA
AAATGAGTACGTATACCTAGCTCATGTTGGGGACGTATTCTCGGATAGGA
CGTAACGTTTTAAGTCCGGAGGTCCATTGTTTGAGGAGAGCCACACACTT
GAAATATCCAACCACTCGAAAAGAGTAGGGGTACGTCCTTCCCGGTTTGA
GTTGATCCAACCTTACATTCTGGTCTTTCGCAGCTTGCACCTTATGAAAC
TTGCATGCTACGGTTTTCTGGCTATGCTAAAGAACGAGAGCTGTGGCCCA
AACTAGGACATAGGCTATTGCTGTTTCACGGGTCACTACAGAAGGGGGCT
AGTCCACAAGGAGAGGAGAGTGTTCAACCCCCCGAACTGTTTCTCACTTA
GAGCTAAGCAGACAAAGCAGTATGTACCATTTTAAAGTCTTCGGTATGAC
CTGGCCGAGGTGTGGACTCGTGACCTGCCGAATACAAGGCGAACACTCTA
CCATTTTACCTGTCAAGTACACCTGTCTGTTGTCTTTCGTGACTTTTTTT
TTTACAATGAGGGAAAGAACACATCGTGTGGCATCGTTTAGCGCAATCGG
TAGAGTGTTTCGCCCAGAACCGAGAGGTCCCGGGTTCGAAACCCCGATAT
GCCCCGATGTTGTGCCCTTGGCAAAGGCACTTTACACGACTTTCCTCACT
CCACCCAGGGGTGAATGGGTACCTGACTTCGGTTGGGGAAGGTCTTATTG
AGGTCACCTGCTTGCGCCGAATGGCAGCCGCCCAGACCCTTGCGACAGTT
CCACAAAGTGCAAGTGTGTAGCAAATATGCATCTGTTCTGTATTATATGA
TTGTAAACCCTACAGCAATTCAGCACTGGCTGCCATTGCAGTGGTAATTT
CTTACCAATAAACCAAGACCAATAATCCATTATTATAACACAGTAAATGT
TTATTGTACAAGTAATGCGAAGGGGGGGGGGGGTCCCCGTACGTTTGTGC
TTTAACAGAAAACAGCAAAACGTTAAACCGTCCATTTAAAACAATTGTGC
AAACTTGGACAGTTTCCAATTCTTCCAGGCTATAATACGATATCATGTAA
TACTAATGTATCAAAATAAAGGATACACCCACAGACCTATTTTCTTCTGT
TCATAATTTGCGACTGAACAATGTTATTAATATGGAAAGCAGGCTATCCA
TGTCATATTTTGGAAAAGTGTACTGAACGATCAAAAGACCCACCCTGATG
TCGGGTCTCTCCTTGAAGAGGAGTAACTCTGAATAATGGAAAAGCGTTCA
TGTGTAAAGCAAATGGGAAGCTAAAAAAAGTTGTATATTCAATTCTATTG
CTATTACATGCTATTGTTCGTTTTACCGTTCACAGGTGTGCACAATGCTA
ACCGTGTGCGACGTTATCTGTCTGAAGATGAGCTACTCAGGGAGCTATCT
GCGCTGGATGAGGCCCTGAAGGACGGACTAGAAAACGACAAAAGGGATGA
AGGTATATGATCATTTCTTTTCTGTCTGTGTTACACTTATCCTGAGCCCC
CCCCCCCTCTTAAAGGACACACAAGCAATATTCGAGCCCAAAAATCGGAT
TTTGAAAGTCAATGTATTTTGTCATTTCTATACATGATAAGTTCAAACGA
CACTATCACAATGTATAGCGACGTCCATGATGCAAAAATACGGCATCGTT
GTGATGTGAGATCTCGCTGAAAATCGTCGCCGGGGTTTTTGTAGGCTTGC
GAAACTAAGGGGACTATCCTACGGCACGTTTTGCACAGTTTTAGAATGCT
CAGAGTATGAAGTTATTACGGAAATATGCTAAACAGAGATGGTAAATGTC
AACAGCAAAACTATTTCAGCATTTTTTTTATTTCCATTTTTTTGCCCTAA
TATTGCTTTGGTTGCCTTTCACTGCCGTTAATGATGTCATCTTTGTCCAA
CTTGACTTCCATCTGGGTAAAACGTCACAACTTTTACTCGACATAACAAA
ACTGATTAATAAGAGAGCCTTTTGTTCATAGTTTTAGAATATTTCTTTGA
CATTTTCTGTCAATTTCCTCCAAGCGCCATATTGTGTAGGATAAACATTG
AACGGTTTGTGTTTTGTATATTTGATACATCTGCTATGGCTTACGACATA
TTCTAGTTGAAGTTCGCTGTCGTTACAGCTGTTTGCTATTATTTTGTTGG
TTGCTTGGTTGGTTGGTTGGTTGGTTGGTAGGTTGGTTGGTTGGTAGGTT
GGTTGGTTGGTTGGTTGGTGGNGGTTGGTAGGTTAGTTGGTTGGTTGGTT
GGTTGGTTGTTGGTTGGTTGGTTGGTTGGTCGGATGTTGGTCGATTGAAA
AAGTATAATCTATGTAAATCCATGGGTGTCTTTGTTTCTCGGAAGTGTGT
ATATCTAGATCCAAGTTAAACACTTTTGGCCATTCAGTTTCGTATATCCT
AAGCATTGTTTGTGACTTAAAATGTTGGAAATTTAAGTCCCCGTTCTTGA
CTTCGGGGATATGACGAGGTTACTGACTCTCAATTCTCGGGACATGTTTG
GAACATTGACTTGTACAGGGTGGCCTGTAGCGATAACAGTTTGGCAAAGG
CAATCTCAGCAGTAACTATGAGGCATTTTTGAGCACGTTTGCCTCTGCAC
GCAGACATGTGTTCTTAATCACTTTGGGCATAACAGGACCATTGATCAAT
ATACAGGAAACTTGTACAAGTATTGGCGGGACGATTTGACGAAGGTATTT
ATTTTCGTTTCATGTCCAAAAGCATGATTTGGCGGAAGTCTTCTAGCTCT
GGCGAGAAGTAGATTTAGCCCTAAAACCCTCATTGCATTGTGCTCTGTGG
CTATTTTCCCCAGAACTTGAAGGGAGAAGCAAAAGCGGCAGCGATGGCAG
CGGCGGCAAAAGTGGCAGCGGCGGCAAAAGTGGCAGCGGCGGTAAAAGTG
GCCACGGCAAGGATCACGGCAGCCACGGCAGCCACGGCAGCCACGGCAGC
CACGGCGGCCACGGCAGCCACGGCAAGGACCACAGCGGCCACGGCAGCCA
CGGCAAG Coding sequence (CDS) from alignment at Sc0000260:163856..171162- >transcript:BL97401_cuf25 ID=transcript:BL97401_cuf25|Name=transcript:BL97401_cuf25|organism=Branchiostoma lanceolatum|type=CDS|length=1197bp|location=Sequence derived from alignment at Sc0000260:163856..171162- (Branchiostoma lanceolatum)
CGGGAACACACTTGGGGCGTCACCATGAGGTTCTACGTCGTGTGTCTGAC
TCTACTGCTGGGGGTGCTGACCGTCAACTCAGTCCCAGGTGTGCACAATG
CTAACCGTGTGCGACGTTATCTGTCTGAAGATGAGCTACTCAGGGAGCTA
TCTGCGCTGGATGAGGCCCTGAAGGACGGACTAGAAAACGACAAAAGGGA
TGAAGAACTTGAAGGGAGAAGCAAAAGCGGCAGCGATGGCAGCGGCGGCA
AAAGTGGCAGCGGCGGCAAAAGTGGCAGCGGCGGTAAAAGTGGCCACGGC
AAGGATCACGGCAGCCACGGCAGCCACGGCAGCCACGGCAGCCACGGCGG
CCACGGCAGCCACGGCAAGGACCACAGCGGCCACGGCAGCCACGGCAAGC
GGGAACACACTTGGGGCGTCACCATGAGGTTCTACGTCGTGTGTCTGACT
CTACTGCTGGGGGTGCTGACCGTCAACTCAGTCCCAGGTGTGCACAATGC
TAACCGTGTGCGACGTTATCTGTCTGAAGATGAGCTACTCAGGGAGCTAT
CTGCGCTGGATGAGGCCCTGAAGGACGGACTAGAAAACGACAAAAGGGAT
GAAGAACTTGAAGGGAGAAGCAAAAGCGGCAGCGATGGCAGCGGCGGCAA
AAGTGGCAGCGGCGGCAAAAGTGGCAGCGGCGGTAAAAGTGGCCACGGCA
AGGATCACGGCAGCCACGGCAGCCACGGCAGCCACGGCAGCCACGGCGGC
CACGGCAGCCACGGCAAGGACCACAGCGGCCACGGCAGCCACGGCAAGCG
GGAACACACTTGGGGCGTCACCATGAGGTTCTACGTCGTGTGTCTGACTC
TACTGCTGGGGGTGCTGACCGTCAACTCAGTCCCAGGTGTGCACAATGCT
AACCGTGTGCGACGTTATCTGTCTGAAGATGAGCTACTCAGGGAGCTATC
TGCGCTGGATGAGGCCCTGAAGGACGGACTAGAAAACGACAAAAGGGATG
AAGAACTTGAAGGGAGAAGCAAAAGCGGCAGCGATGGCAGCGGCGGCAAA
AGTGGCAGCGGCGGCAAAAGTGGCAGCGGCGGTAAAAGTGGCCACGGCAA
GGATCACGGCAGCCACGGCAGCCACGGCAGCCACGGCAGCCACGGCGGCC
ACGGCAGCCACGGCAAGGACCACAGCGGCCACGGCAGCCACGGCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000260 | genome | Sc0000260:163856..171162 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97401_cuf25 |
| Biotype | protein_coding |
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