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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97397_cuf7 >transcript:BL97397_cuf7-protein ID=transcript:BL97397_cuf7-protein|Name=transcript:BL97397_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=268bp
LYTNGNDTVVGEMNNFQVRVGDDTDMSHNSVCGPAWTDRPLNDDVIDVSC
GDAILGRYVSVQIEGRVDSLRLCEVDVFLEQGEASPAYECGETSVFVVSG
DYGLLSTSGNVTNQNSDSGDNGFGSDYSVSSNCSWLISARDGGLLTLTFT
TFDLPDSVGCAEGYVAVYDGANSQAPLLGRYCGGALSPTLVSLGTLFVQF
VTYGRHLSTFSATFAAGKSRNLSLMKSAEQSATLVRGGAPLSAGLAVDGN
NGTDAQALCAETDVMDLP Run BLAST on NCBI mRNA from alignment at Sc0000112:894422..896638- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97397_cuf7 ID=transcript:BL97397_cuf7|Name=transcript:BL97397_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2217bp|location=Sequence derived from alignment at Sc0000112:894422..896638- (Branchiostoma lanceolatum)
TCTCTACACCAACGGGAACGACACTGTCGTCGGTAAGTTTCAGGGGGGCA
ACATAACGGGACAACCAAATTTACTTATACCTTTAGCATTATACACGTAA
GGCACAATGGATCACTCCGTGATGAAAGTACGTCTCTACACCAACGGGAG
CGACACTGTTGTCGGTAAGTTTCAGGGGGGCAACATAACGGGACAACCAA
ATTTACTTATACCTTTAGCATTATACACGTAAGGCACAATGGATCACTCC
GTGATGAAAGTACGCCTGTACACCAACGGGAACGACACTATCGTAGGTAA
GTAAGGGTGGCAACATAACGGGACAACCAAATTTACTTATACCTTTAGCA
TTATACACGTAAGGCACAATGGATTACTCCGTGATGAAAGTACGCCTGTA
CTCCAACGGGAACGACTCTATCGTCGATAAGTTTCAGGGGAGTGACCACG
TTACAAGAGAACGAAGCTTACTTATAACATGTTATTTTGTTGCAATTGCA
ATTGCATCACAGCATTGCACAGGTCACCCAGGCAGATCTGTTGACGTAGG
GTGCCATCGAACAAGTTACATGTTTTTAGCGTGCAATCTTGCCAAAATCA
TCACTTTCACGTTAGTGCAGTACGTCATGGCAGGTTACTTGAAGAAACTT
CTGACATTTTTCAAATGTTAACTTTGTATTTGCTACCACCTTTATTGAGT
TGAAGATGGTAACAATATACACGTCAGGCACATTGAAACAGTTTCATCTT
CTAAACAATATGATTAGATCAAGAAATATTCTCTTATCCCAGGAGAAATG
AACAACTTCCAAGTTCGCGTCGGAGACGACACAGACATGTCCCACAATTC
CGTGTGCGGCCCCGCCTGGACGGATCGGCCGCTGAACGATGACGTCATCG
ACGTCTCCTGTGGAGACGCCATCTTGGGTCGCTACGTCTCCGTGCAGATA
GAAGGGAGGGTCGACTCCCTCCGGCTCTGTGAGGTCGACGTCTTCCTGGA
ACAAGGTACAGATCCCTACTCTTCAAGGAGAGGTTCGGATCCAGATTTTT
TTGGACGTCTTTTTAGGCATTTTTGTCGAGCTTTCTATCTTTTTTTTAGA
TTTGAAACAAGTGAAAAGACTGACAGAATTATCTAAGATATGTCGAAACC
AAGACGGAGAGGAATATCAGCTTGGAGAGGTCCAAGTCTCGTCCGTTTGA
TAAATGCAAAAATCCAACCAGTAAGAACTTCTTCCGGGGATAATTACCGG
ACATCGTTTATCAACCATGACTGACGGTGCCGTTTCTAATACTTGCCAAG
TATCTTGACCGTTCTTGTTTCCTACCAGGAGAAGCCTCACCTGCCTACGA
GTGCGGCGAGACTTCCGTGTTCGTAGTGTCTGGAGATTACGGGCTTCTAT
CCACATCCGGGAACGTGACAAACCAAAACAGCGATTCTGGCGACAATGGC
TTTGGCTCGGATTACTCTGTCAGCAGCAACTGCAGTTGGCTCATTTCTGC
CAGAGATGGCGGCCTCCTCACCCTCACATTCACGACCTTTGACCTTCCTG
ACAGTGTGGGGTGCGCGGAGGGATATGTGGCCGTGTACGACGGCGCGAAC
TCCCAGGCTCCGCTGCTCGGGCGGTACTGCGGCGGGGCCCTGTCGCCGAC
ACTCGTCAGTCTGGGCACTCTGTTCGTCCAGTTTGTCACGTACGGACGCC
ACTTGTCAACATTTAGTGCTACATTCGCCGCAGGAAAATCAAGTAAGAGC
AATTATCCATGCTACCTCTCGCATTAGGTGTCGTGGATGTCAGGTTCCTA
TATTACATTTTATTACTATGGTGCATCAATGTTCATAAGATTATAATGTT
GGGAGGAAATTGTATTTTGTTCCTGTTCACGGATAAACAAAAAAAAATAT
AACAAGAAAAAAGCCATCAGCTGTCAAAAATTCTATGGAAGACGTAACCT
TATGTGACATTTTCTAGCAATCCATTTAAAGCCTATTGAGAGATAGACCA
AAAACACAGTTACGCCATCGAAAACAGAACCATCTTTGATAAGGTGATGA
CTATGCTACTGTGTTCCAAAGGAAACCTCTCATTGATGAAGTCAGCCGAA
CAGAGTGCGACCCTTGTGAGAGGAGGAGCACCGCTGTCGGCCGGGCTGGC
GGTGGACGGGAACAATGGGACCGACGCGCAGGCGCTCTGCGCAGAGACTG
ACGTCATGGACCTACCC Coding sequence (CDS) from alignment at Sc0000112:894422..896638- >transcript:BL97397_cuf7 ID=transcript:BL97397_cuf7|Name=transcript:BL97397_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=3216bp|location=Sequence derived from alignment at Sc0000112:894422..896638- (Branchiostoma lanceolatum)
CTCTACACCAACGGGAACGACACTGTCGTCGGAGAAATGAACAACTTCCA
AGTTCGCGTCGGAGACGACACAGACATGTCCCACAATTCCGTGTGCGGCC
CCGCCTGGACGGATCGGCCGCTGAACGATGACGTCATCGACGTCTCCTGT
GGAGACGCCATCTTGGGTCGCTACGTCTCCGTGCAGATAGAAGGGAGGGT
CGACTCCCTCCGGCTCTGTGAGGTCGACGTCTTCCTGGAACAAGGAGAAG
CCTCACCTGCCTACGAGTGCGGCGAGACTTCCGTGTTCGTAGTGTCTGGA
GATTACGGGCTTCTATCCACATCCGGGAACGTGACAAACCAAAACAGCGA
TTCTGGCGACAATGGCTTTGGCTCGGATTACTCTGTCAGCAGCAACTGCA
GTTGGCTCATTTCTGCCAGAGATGGCGGCCTCCTCACCCTCACATTCACG
ACCTTTGACCTTCCTGACAGTGTGGGGTGCGCGGAGGGATATGTGGCCGT
GTACGACGGCGCGAACTCCCAGGCTCCGCTGCTCGGGCGGTACTGCGGCG
GGGCCCTGTCGCCGACACTCGTCAGTCTGGGCACTCTGTTCGTCCAGTTT
GTCACGTACGGACGCCACTTGTCAACATTTAGTGCTACATTCGCCGCAGG
AAAATCAAGAAACCTCTCATTGATGAAGTCAGCCGAACAGAGTGCGACCC
TTGTGAGAGGAGGAGCACCGCTGTCGGCCGGGCTGGCGGTGGACGGGAAC
AATGGGACCGACGCGCAGGCGCTCTGCGCAGAGACTGACGTCATGGACCT
ACCCCTCTACACCAACGGGAACGACACTGTCGTCGGAGAAATGAACAACT
TCCAAGTTCGCGTCGGAGACGACACAGACATGTCCCACAATTCCGTGTGC
GGCCCCGCCTGGACGGATCGGCCGCTGAACGATGACGTCATCGACGTCTC
CTGTGGAGACGCCATCTTGGGTCGCTACGTCTCCGTGCAGATAGAAGGGA
GGGTCGACTCCCTCCGGCTCTGTGAGGTCGACGTCTTCCTGGAACAAGGA
GAAGCCTCACCTGCCTACGAGTGCGGCGAGACTTCCGTGTTCGTAGTGTC
TGGAGATTACGGGCTTCTATCCACATCCGGGAACGTGACAAACCAAAACA
GCGATTCTGGCGACAATGGCTTTGGCTCGGATTACTCTGTCAGCAGCAAC
TGCAGTTGGCTCATTTCTGCCAGAGATGGCGGCCTCCTCACCCTCACATT
CACGACCTTTGACCTTCCTGACAGTGTGGGGTGCGCGGAGGGATATGTGG
CCGTGTACGACGGCGCGAACTCCCAGGCTCCGCTGCTCGGGCGGTACTGC
GGCGGGGCCCTGTCGCCGACACTCGTCAGTCTGGGCACTCTGTTCGTCCA
GTTTGTCACGTACGGACGCCACTTGTCAACATTTAGTGCTACATTCGCCG
CAGGAAAATCAAGAAACCTCTCATTGATGAAGTCAGCCGAACAGAGTGCG
ACCCTTGTGAGAGGAGGAGCACCGCTGTCGGCCGGGCTGGCGGTGGACGG
GAACAATGGGACCGACGCGCAGGCGCTCTGCGCAGAGACTGACGTCATGG
ACCTACCCCTCTACACCAACGGGAACGACACTGTCGTCGGAGAAATGAAC
AACTTCCAAGTTCGCGTCGGAGACGACACAGACATGTCCCACAATTCCGT
GTGCGGCCCCGCCTGGACGGATCGGCCGCTGAACGATGACGTCATCGACG
TCTCCTGTGGAGACGCCATCTTGGGTCGCTACGTCTCCGTGCAGATAGAA
GGGAGGGTCGACTCCCTCCGGCTCTGTGAGGTCGACGTCTTCCTGGAACA
AGGAGAAGCCTCACCTGCCTACGAGTGCGGCGAGACTTCCGTGTTCGTAG
TGTCTGGAGATTACGGGCTTCTATCCACATCCGGGAACGTGACAAACCAA
AACAGCGATTCTGGCGACAATGGCTTTGGCTCGGATTACTCTGTCAGCAG
CAACTGCAGTTGGCTCATTTCTGCCAGAGATGGCGGCCTCCTCACCCTCA
CATTCACGACCTTTGACCTTCCTGACAGTGTGGGGTGCGCGGAGGGATAT
GTGGCCGTGTACGACGGCGCGAACTCCCAGGCTCCGCTGCTCGGGCGGTA
CTGCGGCGGGGCCCTGTCGCCGACACTCGTCAGTCTGGGCACTCTGTTCG
TCCAGTTTGTCACGTACGGACGCCACTTGTCAACATTTAGTGCTACATTC
GCCGCAGGAAAATCAAGAAACCTCTCATTGATGAAGTCAGCCGAACAGAG
TGCGACCCTTGTGAGAGGAGGAGCACCGCTGTCGGCCGGGCTGGCGGTGG
ACGGGAACAATGGGACCGACGCGCAGGCGCTCTGCGCAGAGACTGACGTC
ATGGACCTACCCCTCTACACCAACGGGAACGACACTGTCGTCGGAGAAAT
GAACAACTTCCAAGTTCGCGTCGGAGACGACACAGACATGTCCCACAATT
CCGTGTGCGGCCCCGCCTGGACGGATCGGCCGCTGAACGATGACGTCATC
GACGTCTCCTGTGGAGACGCCATCTTGGGTCGCTACGTCTCCGTGCAGAT
AGAAGGGAGGGTCGACTCCCTCCGGCTCTGTGAGGTCGACGTCTTCCTGG
AACAAGGAGAAGCCTCACCTGCCTACGAGTGCGGCGAGACTTCCGTGTTC
GTAGTGTCTGGAGATTACGGGCTTCTATCCACATCCGGGAACGTGACAAA
CCAAAACAGCGATTCTGGCGACAATGGCTTTGGCTCGGATTACTCTGTCA
GCAGCAACTGCAGTTGGCTCATTTCTGCCAGAGATGGCGGCCTCCTCACC
CTCACATTCACGACCTTTGACCTTCCTGACAGTGTGGGGTGCGCGGAGGG
ATATGTGGCCGTGTACGACGGCGCGAACTCCCAGGCTCCGCTGCTCGGGC
GGTACTGCGGCGGGGCCCTGTCGCCGACACTCGTCAGTCTGGGCACTCTG
TTCGTCCAGTTTGTCACGTACGGACGCCACTTGTCAACATTTAGTGCTAC
ATTCGCCGCAGGAAAATCAAGAAACCTCTCATTGATGAAGTCAGCCGAAC
AGAGTGCGACCCTTGTGAGAGGAGGAGCACCGCTGTCGGCCGGGCTGGCG
GTGGACGGGAACAATGGGACCGACGCGCAGGCGCTCTGCGCAGAGACTGA
CGTCATGGACCTACCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000112 | genome | Sc0000112:894422..896638 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97397_cuf7 |
| Biotype | protein_coding |
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