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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97389_cuf11 >transcript:BL97389_cuf11-protein ID=transcript:BL97389_cuf11-protein|Name=transcript:BL97389_cuf11|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
VKSASCLLLALCRRERRVSPVFKRGEDLSAMFPCLHSVLTTFLIQCALFP
TFGDGSTESGTDRQELNMDWNNTTKPCMLRDGRTTIDIAVPINSAAGTPV
GSVFLTGRLDTDVTLAVTYNDQGSAKKKYLDLNVTSEHQAVLVLSEMGAK
EVKTNRLNNTMATLRCKVESS Run BLAST on NCBI mRNA from alignment at Sc0000034:1231543..1232818- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97389_cuf11 ID=transcript:BL97389_cuf11|Name=transcript:BL97389_cuf11|organism=Branchiostoma lanceolatum|type=mRNA|length=1276bp|location=Sequence derived from alignment at Sc0000034:1231543..1232818- (Branchiostoma lanceolatum)
AGTTAAGTCAGCGAGCTGCTTGTTACTTGCCCTGTGTAGGCGTGAGAGGA
GAGTTTCCCCGGTGTTTAAGAGAGGAGAAGATCTTTCCGCGATGTTTCCC
TGCCTTCACTCGGTGTTAACCACGTTCTTGATTCAGTGCGCGCTTTTTCC
AACGTTCGGTGACGGCAGCACTGAGAGCGGGACCGACAGACAAGAACTTA
ACATGGGTACGTTATGTTTGATTGTCAAAATGAGTTTTTTTTACTGTCTC
GATTTAGTAATGTCTGCTAAAGCACTGACACATATATGATGATATATCGG
CGTGTATATCTAGACGAAGAAAACGAAGATGGCTAGGCTACCAGAGGCGT
TTGGTATAGTAGTCTTATATATTCTGTCGCTAAACTGTGTTATTTGTCAG
GGCCATTCTAATACCGGTGACTATATCAGCTGTGTTTAAATTTTGTTGAA
GCTCGCTTCAGCGTCTTTGCCGTGTAGTCGCCATTATCTAAAGTACCTTC
ATGCCTTAGCAAGTTATAAAGACTACATTTTAAGACGATTCCTTTTTTTG
CACATGCAGATTGGAATAACACAACAAAGCCGTGTATGCTGAGAGATGGA
CGGACGACGATTGATATTGCAGTACCAATAAATTCCGCTGCAGGTGAATA
ACGCTGTGTCCTTTGGTACTGCTGCTGTACATGTACTATCCACTGCTTCT
ACTATATTCTACGTCATATGAAGTTATAAACATTGCCTGCTACATGATTT
TATGTAGATTATGTCACATCATCCAATGACAGCTATTCCGATAAGCAACC
GAATATCATGGCGCCAGGTTTGAAATATCATATCAAGAGAAACCTTGCTC
TGACGAAGTACATTTTTTTATCTCTAGGAACACCTGTAGGTTCCGTTTTC
CTTACAGGTAGACTTGACACAGACGTCACACTGGCCGTGACGTATAATGA
CCAGGGAAGCGCGAAGAAAAAGTACTTGGACTTGAACGTGACGTCAGAGC
ACCAGGCTGTCCTTGTTTTGTCGGAGATGGGAGCGAAAGAGGTCAAAACA
AACCGACTCAACAACACAATGGTCAGTAGAAATTTCACTTTCTTCCAGTA
CTCGATATTTCCAACATTTCAACTACGGATTTAATCTGTGAAGTACATTT
TGTAAAAATAATGAGATGTCGTATTGAACAATAGAAATGAACCACCCTGA
ACAACAGAAATGAAGAGCTTTTACTGTATTTTGTGCCTTGTACAGGCGAC
CCTCAGATGTAAGGTGGAAAGTAGTG Coding sequence (CDS) from alignment at Sc0000034:1231543..1232818- >transcript:BL97389_cuf11 ID=transcript:BL97389_cuf11|Name=transcript:BL97389_cuf11|organism=Branchiostoma lanceolatum|type=CDS|length=2052bp|location=Sequence derived from alignment at Sc0000034:1231543..1232818- (Branchiostoma lanceolatum)
GTTAAGTCAGCGAGCTGCTTGTTACTTGCCCTGTGTAGGCGTGAGAGGAG
AGTTTCCCCGGTGTTTAAGAGAGGAGAAGATCTTTCCGCGATGTTTCCCT
GCCTTCACTCGGTGTTAACCACGTTCTTGATTCAGTGCGCGCTTTTTCCA
ACGTTCGGTGACGGCAGCACTGAGAGCGGGACCGACAGACAAGAACTTAA
CATGGATTGGAATAACACAACAAAGCCGTGTATGCTGAGAGATGGACGGA
CGACGATTGATATTGCAGTACCAATAAATTCCGCTGCAGGAACACCTGTA
GGTTCCGTTTTCCTTACAGGTAGACTTGACACAGACGTCACACTGGCCGT
GACGTATAATGACCAGGGAAGCGCGAAGAAAAAGTACTTGGACTTGAACG
TGACGTCAGAGCACCAGGCTGTCCTTGTTTTGTCGGAGATGGGAGCGAAA
GAGGTCAAAACAAACCGACTCAACAACACAATGGCGACCCTCAGATGTAA
GGTGGAAAGTAGTGTTAAGTCAGCGAGCTGCTTGTTACTTGCCCTGTGTA
GGCGTGAGAGGAGAGTTTCCCCGGTGTTTAAGAGAGGAGAAGATCTTTCC
GCGATGTTTCCCTGCCTTCACTCGGTGTTAACCACGTTCTTGATTCAGTG
CGCGCTTTTTCCAACGTTCGGTGACGGCAGCACTGAGAGCGGGACCGACA
GACAAGAACTTAACATGGATTGGAATAACACAACAAAGCCGTGTATGCTG
AGAGATGGACGGACGACGATTGATATTGCAGTACCAATAAATTCCGCTGC
AGGAACACCTGTAGGTTCCGTTTTCCTTACAGGTAGACTTGACACAGACG
TCACACTGGCCGTGACGTATAATGACCAGGGAAGCGCGAAGAAAAAGTAC
TTGGACTTGAACGTGACGTCAGAGCACCAGGCTGTCCTTGTTTTGTCGGA
GATGGGAGCGAAAGAGGTCAAAACAAACCGACTCAACAACACAATGGCGA
CCCTCAGATGTAAGGTGGAAAGTAGTGTTAAGTCAGCGAGCTGCTTGTTA
CTTGCCCTGTGTAGGCGTGAGAGGAGAGTTTCCCCGGTGTTTAAGAGAGG
AGAAGATCTTTCCGCGATGTTTCCCTGCCTTCACTCGGTGTTAACCACGT
TCTTGATTCAGTGCGCGCTTTTTCCAACGTTCGGTGACGGCAGCACTGAG
AGCGGGACCGACAGACAAGAACTTAACATGGATTGGAATAACACAACAAA
GCCGTGTATGCTGAGAGATGGACGGACGACGATTGATATTGCAGTACCAA
TAAATTCCGCTGCAGGAACACCTGTAGGTTCCGTTTTCCTTACAGGTAGA
CTTGACACAGACGTCACACTGGCCGTGACGTATAATGACCAGGGAAGCGC
GAAGAAAAAGTACTTGGACTTGAACGTGACGTCAGAGCACCAGGCTGTCC
TTGTTTTGTCGGAGATGGGAGCGAAAGAGGTCAAAACAAACCGACTCAAC
AACACAATGGCGACCCTCAGATGTAAGGTGGAAAGTAGTGTTAAGTCAGC
GAGCTGCTTGTTACTTGCCCTGTGTAGGCGTGAGAGGAGAGTTTCCCCGG
TGTTTAAGAGAGGAGAAGATCTTTCCGCGATGTTTCCCTGCCTTCACTCG
GTGTTAACCACGTTCTTGATTCAGTGCGCGCTTTTTCCAACGTTCGGTGA
CGGCAGCACTGAGAGCGGGACCGACAGACAAGAACTTAACATGGATTGGA
ATAACACAACAAAGCCGTGTATGCTGAGAGATGGACGGACGACGATTGAT
ATTGCAGTACCAATAAATTCCGCTGCAGGAACACCTGTAGGTTCCGTTTT
CCTTACAGGTAGACTTGACACAGACGTCACACTGGCCGTGACGTATAATG
ACCAGGGAAGCGCGAAGAAAAAGTACTTGGACTTGAACGTGACGTCAGAG
CACCAGGCTGTCCTTGTTTTGTCGGAGATGGGAGCGAAAGAGGTCAAAAC
AAACCGACTCAACAACACAATGGCGACCCTCAGATGTAAGGTGGAAAGTA
GT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000034 | genome | Sc0000034:1231543..1232818 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97389_cuf11 |
| Biotype | protein_coding |
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