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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97386_cuf9 >transcript:BL97386_cuf9-protein ID=transcript:BL97386_cuf9-protein|Name=transcript:BL97386_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=173bp
MGPRNGLGRGLLVAILAVSCAVVSGDPCVPNPCDPDNGHCRQVGWDIRCV
CRPGFRLMPDGRSCFPDTLSPSNLCVPNPCDPTNGQCVQEGANYRCICRP
GYRLMSDGRRCAPLAPVSSSPCSPNPCDPHYGRCVEEGRNYRCVCNPGFE
LMPDGRRCTGVGLTFFRVLPTVH Run BLAST on NCBI mRNA from alignment at Sc0000034:1284094..1288705- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97386_cuf9 ID=transcript:BL97386_cuf9|Name=transcript:BL97386_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=4612bp|location=Sequence derived from alignment at Sc0000034:1284094..1288705- (Branchiostoma lanceolatum)
ATAAGAAAGTCATCGACAGGTAGACCGGGGAGGGTCACACGGGTACAGGT
GTAAGGTGGAAGATTGACGGTGAGACGGTTCGATCATGGGCCCGAGGAAC
GGCCTTGGAAGGGGCCTGTTAGTCGCTATCCTTGCCGTTAGCTGTGCAGG
TATGTGGCCATGAATAATCAGCCTAGCATGCTATAACTGTGAGTGATCTT
TGAACGTAATCATTGACCGCGTTACACCTGGTAAACGGATGTCGCGTCAT
TTTTACTTACCAATGTCGGACTATTCTGGTATAGCCTGACGTATATCCTC
ACAGAACTCAGCATAAACAGTGGCTGAAACATGCCATGATTCCTGTCATC
GAAATAACGTCAAATACGGTCTATACAGAGCAACGTTGTAAAACTACATG
GTTGTCTGAGGTTGCCAGGGAGTGTTCTTTACTTGCAACAGACGATTTCG
TCTACATAATATTCACCCAATTGAATACCCTTCACCCTGATTCACAAAAG
TGTCGAACAGTTACTATGACCGAGTTAAAGTGCAGCTTAATCACAGTCTG
ATGCGACATGAATGTTCATTGTTCTTGGTCTGCCCTTTCGCGACACCCTT
CCCCCTAGACTATTGATAAATAACCCGGACATAAATCACGTAGTTAACAG
GTGGTTGGGTTGGCCTTTCGACCCAAAGCGGCAGGAAATGGCGCCCCTCC
CGAGACGCCGACGTTCAGACACACGCGGAGGCGTTTGTGCCAACATCTAC
AGACTAACAATAGCTAACAATGCATTTTGGGATTTAATAGATATTGATTT
ACGGTTATTTCTGCAGACTAGGCAATTAAGGCTGCTTGCTAGAGGTGTTA
CTGTTGAATTGAAGTTGTTTTTATCTCCCCCGATTGCATGTACTGTTTGC
GTTCCTATTTATTCTGTGTCTTGCGATGTCAATTCGTCTCAGTTGACTAG
TAGCCGTGGCGACTCTTGGAGGGCGTATTTTGCTTGTTAACTGGTACACT
AGTCCTCACAATATAAGGACGCCATCCAAAAGTCGCCACGGCAAAGTCGA
TTGGCACTCAGAAAGATATGCTTTGACATGCATCTGCAGACTGGGTTTAA
TACTGCACAGTGTCCTCTTTGGGAGGGGGGTTTCTGTGCATCGACTTTAT
TGTTGCGGAGTCTTGTTGAGTCTGGGGGCATGTACGTGATTTCTTCGTGA
CAAAACCGCTTGACGCCCTCCCTGTTTGCAAATATAACCTTTGCTGAGGC
CAAGGCTTTATGTTTTGCATTGCGGGGGTGGGCTTAAGCTTCCTGTGTAT
ACCAGACAAAAACTATACGCTACTCATTGATATTTATCACATAATGATTG
AACGTACACATTAACATTGACTGTTAAAAGGCAACAGACATAAACTTTAC
TTAAAAGAGTCAAGAAAAAGCCCCAGAATGGGCGCTATCTCCCCTGCACA
GCTGTGCACACAGTTCGGTGTTGAGTTAACGGCTCTGTGTAATCACACTG
CTTGTTCTTCGCGCTTTCAATTAAGTGACTGAGCAGACAACACTGTCCTA
TGAAGTAGTTGGCAATGAACATACAATAATCGTAAAGAATATTCGCTTTA
AATCTTAAACTGAAGGCGGGTACCTTGGAGTACGTTGTTCAAAGTATACG
AGGGTAAGGTGAGGGTTGGCCGGGATGCATACTGATATCGTTACGGTACA
GTAGCAACGGTAGATCTCACGTTTGCACTTTACTCCACACGTGGGCGTGG
TATTTTTATATTCCATCCAATACAGGCTAAGGAAGAATACTATGCTTGAA
CATAGTATTCCTTGAGAAGAAACTTGGTTTGTCGTATCCTTTGGTGCGAC
AACGTCCTTATGTATGCATTTGTCCTTGTGTCCGCGGCTTCGCCTCCCGA
TATTGCAACAATAAAAGTCAACAATGATTTGTAGGTACACCTAGAGGGCG
TCGTAAGCTAGCTTTGTGACATTCTATCACAACGATTTGCCTACAGTTTG
TGTGTCGTGCTCTTGCAGTTGTTTCCGGGGACCCCTGTGTCCCGAACCCC
TGCGACCCGGATAACGGACATTGCCGCCAAGTCGGCTGGGACATCAGATG
TGTGTGTCGGCCTGGATTCCGGCTCATGCCTGACGGCCGGTCCTGTTTCC
CTGACACTCGTACGTCAAACCGCTTATACTACTGGTGTTAGTGCGCTTAT
TTGTTTGCAGTTGTAACAGCTCTGATTCACTTTACACCGATCCTTTGTCA
TTCTTACCACCACGCACGTATATAGAAAGATATAAGCTTGCTCTTAGATA
ATACCGAGGGCTGCAGTCTTTGGAATACAGAACGAAAGCTTTTTTTTGTA
GCTTTTTTGCACATCTGATAATTCTAAAACATTAGATGCAGTTTGAACTT
CATTTATCTTGAACGCATATCTATTGGTCATTCTATGAATCTTATTTCTC
AATGGATTGCTTCGTAAAGTTTGCTGTAATGACCCAACCTTGGGTAATGC
TGTCGTTCCGTAGCTAGTAAGACACTGTTTGGAGAAGGAGTGTTCAATCA
TCCAATCTGTCCTACTTTTCCAGTTTCTCCCAGTAATCTATGCGTTCCAA
ACCCCTGCGATCCAACCAATGGCCAATGTGTCCAAGAGGGAGCGAACTAC
AGGTGTATCTGTAGGCCGGGGTTCCAGCTGATGTCGGACGGCCGAAGTTG
TAGTCAACTCCCTCAGCGTACGTGGTTATATTTTCTGTTCACGGCTGTCT
AATTATAAGTTATAAATCTTCTGGTCACTCACTCACTCAACTGTTTGGTT
AAAATCAGTTGGTTGATACTAAGCGTGCTAGCTCACACTGTCCATTTTAA
TCTTGACGTGATAGCAATGACGATACGAACCTGCTGCTCCGTTGACTTAT
CTTCAAGAATAGCACTGCTATACTACTGTTCACAGCACATCGGTACATCA
ATGCACGTTTAGAACTGACCTATATTGTATTTTACGCACTGAACCACTAC
TACTTCGGTGAAGGCACAGCAACACAATATGTCAGTATTGTGTTATCCAC
CACCACCCCTCCCAAACACACGATTTCTGTCACCATATCAGCACCTGCAA
AGCATAATGCAGTACTGTTTATTCATGTCCCATATTTGCAGCTCTTTTAG
CTATAGAGGATGATCACGACCATGACCATGGCCGTGACCCCTGTTCACCA
AACCCCTGCGACCCAACTAACGGCCAGTGTGTGGAAGAAGGAGACAACTA
CAGATGTATCTGTAGACCGGGGTATCGGCTGATGTCGGACGGACGAAGAT
GCGCTCCACTCGCCCGTACGTTTGATTTTCACAACTGTCTTATTTTCCTA
ACATTTTGGTTACTCTCTCAATTGCCTGGTTGAAACTAGTTGGTGAAAAC
TTTCAGTTCCAACTGTACACCCACTGTACACTGTGCTCCTTGTCATATCT
TTGAATGGTGTAATTTGCTGTTGATTTGAAATCTTTCTCGGAATGTCTCC
ACTGCTGTCACCTACAGCTACAAGGCATATTGACAAGTCACCTGCACTGT
ATTGGTGGATGCTTTCATCAGTTCCAACTGTATCAAGAGCTCATACTGTA
CACTCCTCCTTGATCTTACCACAACTTTAAGCGGTGCGAACATGCTGCTA
AGCTAAAATATTTCTCGAAATATCTTCACTGATGTCGCCTCAACGCACGT
TGCCAAGTTACCTGCATGGTATTTCACGCAGTGAGTTAGTGGAAGCACAG
CGCTAGTATGTCGGAATTGCACCCCACCACCACCACCACGCCGATTTCAT
TCTGGCACCACACCAGCAAAGTGTCACGACCAGATATATGACGACATCCC
AGTTCTGTATTATGTGTCTAATATGTCCAGCTGTGGTAGAGGATGACCAC
GATCATGACCACGACCATGACCATGGCCGTGACCCCTGTTCACCAAACCC
CTGCGACCCAACTAACGGCCAGTGTGTGGAAGAAGGAGACAACTACAGGT
GTATCTGTAGACCGGGGTATCGGCTGATGTCGGACGGACGAAGATGTGCT
CCACTCGCCCGTACGTCTTCTTTCCACGGCTGTCTCATGTTCTCTGATCT
GCTCATTTAGCTGCTTGGTTAAAGCAGGATGGTGGATCCTTTTCACTCCT
ACCTGTATCAAGATCTGACACTGTTATCCGTTATCGCTTACTAGAATCAT
GTCTATACCTTTGCTTGGTGCAACCGTACTGTTGCCTGGAAGTATTGGCC
GTCATATATCTACTTCCTCTCACAGCGGTTACAATGTACGTTGGGTTTCT
AACTTGAAACACGCGGCAGTATTTTGTTCTATACTATGAGCTCCTCGTAC
TCTTACAGCTGTTACAATATACGTTGAGTTTCTAACTTGAGACACGAGAC
AGTATTCTGTTCAATAGAGTCCCCTGTACTCTTACAGCTGTTTCCAGCAG
TCCGTGTTCTCCAAATCCCTGCGATCCACACTATGGGCGATGCGTGGAAG
AGGGAAGAAACTACCGATGTGTCTGTAACCCGGGGTTCGAGTTGATGCCA
GACGGACGGAGATGTACCGGTGTTGGTCTTACGTTTTTCCGTGTTCTTCC
CACTGTGCACTG Coding sequence (CDS) from alignment at Sc0000034:1284094..1288705- >transcript:BL97386_cuf9 ID=transcript:BL97386_cuf9|Name=transcript:BL97386_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2595bp|location=Sequence derived from alignment at Sc0000034:1284094..1288705- (Branchiostoma lanceolatum)
ATGGGCCCGAGGAACGGCCTTGGAAGGGGCCTGTTAGTCGCTATCCTTGC
CGTTAGCTGTGCAGTTGTTTCCGGGGACCCCTGTGTCCCGAACCCCTGCG
ACCCGGATAACGGACATTGCCGCCAAGTCGGCTGGGACATCAGATGTGTG
TGTCGGCCTGGATTCCGGCTCATGCCTGACGGCCGGTCCTGTTTCCCTGA
CACTCTTTCTCCCAGTAATCTATGCGTTCCAAACCCCTGCGATCCAACCA
ATGGCCAATGTGTCCAAGAGGGAGCGAACTACAGGTGTATCTGTAGACCG
GGGTATCGGCTGATGTCGGACGGACGAAGATGTGCTCCACTCGCCCCTGT
TTCCAGCAGTCCGTGTTCTCCAAATCCCTGCGATCCACACTATGGGCGAT
GCGTGGAAGAGGGAAGAAACTACCGATGTGTCTGTAACCCGGGGTTCGAG
TTGATGCCAGACGGACGGAGATGTACCGGTGTTGGTCTTACGTTTTTCCG
TGTTCTTCCCACTGTGCACATGGGCCCGAGGAACGGCCTTGGAAGGGGCC
TGTTAGTCGCTATCCTTGCCGTTAGCTGTGCAGTTGTTTCCGGGGACCCC
TGTGTCCCGAACCCCTGCGACCCGGATAACGGACATTGCCGCCAAGTCGG
CTGGGACATCAGATGTGTGTGTCGGCCTGGATTCCGGCTCATGCCTGACG
GCCGGTCCTGTTTCCCTGACACTCTTTCTCCCAGTAATCTATGCGTTCCA
AACCCCTGCGATCCAACCAATGGCCAATGTGTCCAAGAGGGAGCGAACTA
CAGGTGTATCTGTAGACCGGGGTATCGGCTGATGTCGGACGGACGAAGAT
GTGCTCCACTCGCCCCTGTTTCCAGCAGTCCGTGTTCTCCAAATCCCTGC
GATCCACACTATGGGCGATGCGTGGAAGAGGGAAGAAACTACCGATGTGT
CTGTAACCCGGGGTTCGAGTTGATGCCAGACGGACGGAGATGTACCGGTG
TTGGTCTTACGTTTTTCCGTGTTCTTCCCACTGTGCACATGGGCCCGAGG
AACGGCCTTGGAAGGGGCCTGTTAGTCGCTATCCTTGCCGTTAGCTGTGC
AGTTGTTTCCGGGGACCCCTGTGTCCCGAACCCCTGCGACCCGGATAACG
GACATTGCCGCCAAGTCGGCTGGGACATCAGATGTGTGTGTCGGCCTGGA
TTCCGGCTCATGCCTGACGGCCGGTCCTGTTTCCCTGACACTCTTTCTCC
CAGTAATCTATGCGTTCCAAACCCCTGCGATCCAACCAATGGCCAATGTG
TCCAAGAGGGAGCGAACTACAGGTGTATCTGTAGACCGGGGTATCGGCTG
ATGTCGGACGGACGAAGATGTGCTCCACTCGCCCCTGTTTCCAGCAGTCC
GTGTTCTCCAAATCCCTGCGATCCACACTATGGGCGATGCGTGGAAGAGG
GAAGAAACTACCGATGTGTCTGTAACCCGGGGTTCGAGTTGATGCCAGAC
GGACGGAGATGTACCGGTGTTGGTCTTACGTTTTTCCGTGTTCTTCCCAC
TGTGCACATGGGCCCGAGGAACGGCCTTGGAAGGGGCCTGTTAGTCGCTA
TCCTTGCCGTTAGCTGTGCAGTTGTTTCCGGGGACCCCTGTGTCCCGAAC
CCCTGCGACCCGGATAACGGACATTGCCGCCAAGTCGGCTGGGACATCAG
ATGTGTGTGTCGGCCTGGATTCCGGCTCATGCCTGACGGCCGGTCCTGTT
TCCCTGACACTCTTTCTCCCAGTAATCTATGCGTTCCAAACCCCTGCGAT
CCAACCAATGGCCAATGTGTCCAAGAGGGAGCGAACTACAGGTGTATCTG
TAGACCGGGGTATCGGCTGATGTCGGACGGACGAAGATGTGCTCCACTCG
CCCCTGTTTCCAGCAGTCCGTGTTCTCCAAATCCCTGCGATCCACACTAT
GGGCGATGCGTGGAAGAGGGAAGAAACTACCGATGTGTCTGTAACCCGGG
GTTCGAGTTGATGCCAGACGGACGGAGATGTACCGGTGTTGGTCTTACGT
TTTTCCGTGTTCTTCCCACTGTGCACATGGGCCCGAGGAACGGCCTTGGA
AGGGGCCTGTTAGTCGCTATCCTTGCCGTTAGCTGTGCAGTTGTTTCCGG
GGACCCCTGTGTCCCGAACCCCTGCGACCCGGATAACGGACATTGCCGCC
AAGTCGGCTGGGACATCAGATGTGTGTGTCGGCCTGGATTCCGGCTCATG
CCTGACGGCCGGTCCTGTTTCCCTGACACTCTTTCTCCCAGTAATCTATG
CGTTCCAAACCCCTGCGATCCAACCAATGGCCAATGTGTCCAAGAGGGAG
CGAACTACAGGTGTATCTGTAGACCGGGGTATCGGCTGATGTCGGACGGA
CGAAGATGTGCTCCACTCGCCCCTGTTTCCAGCAGTCCGTGTTCTCCAAA
TCCCTGCGATCCACACTATGGGCGATGCGTGGAAGAGGGAAGAAACTACC
GATGTGTCTGTAACCCGGGGTTCGAGTTGATGCCAGACGGACGGAGATGT
ACCGGTGTTGGTCTTACGTTTTTCCGTGTTCTTCCCACTGTGCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000034 | genome | Sc0000034:1284094..1288705 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97386_cuf9 |
| Biotype | protein_coding |
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